Alexander Schmidt

ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 43

Top Venues

Journal of proteome research

Nature communications

Proceedings of the National Academy of Sciences of the United States of America

FEBS open bio

University of Basel

Max-Planck Institute of Biochemistry (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Basel Dec 01 2009

Switzerland

Head of Proteomics Core Facility :: Biozentrum

Eidgenössische Technische Hochschule Zürich Feb 15 2006 - Nov 30 2009

Switzerland

Postdoc :: Institute of Molecular Systems Biology

City of Erlangen Aug 01 2000 - Jan 31 2001

Germany

Pratical course :: Regional Institute for Health and Food Safety

Norwich Research Park Jan 01 2000 - Jul 01 2000

United Kingdom

Placement :: Institute of Food Research

Education History

Max-Planck Institute of Biochemistry Oct 01 2001 - Feb 15 2006

Germany

PHD :: Protein Analytics

Publications

Meriç Ataman, Nitish Mittal, Lionel A Tintignac, Alexander Schmidt, Daniel J Ham, Asier González, Markus A Rüegg, Mihaela Zavolan
Calorie restriction and rapamycin distinctly mitigate aging-associated protein phosphorylation changes in mouse muscles. Communications biology 7 (1) (2024)
Klemens Fröhlich, Regula Furrer, Christian Schori, Christoph Handschin, Alexander Schmidt
Robust, Precise, and Deep Proteome Profiling Using a Small Mass Range and Narrow Window Data-Independent-Acquisition Scheme. Journal of proteome research 23 (3) (2024)
Klemens Fröhlich, Regula Furrer, Christian Schori, Christoph Handschin, Alexander Schmidt
Robust, Precise, and Deep Proteome Profiling Using a Small Mass Range and Narrow Window Data-Independent-Acquisition Scheme. Journal of proteome research 23 (3) (2024)
Enea Maffei, Anne-Kathrin Woischnig, Marco R Burkolter, Yannik Heyer, Dorentina Humolli, Nicole Thürkauf, Thomas Bock, Alexander Schmidt, Pablo Manfredi, Adrian Egli, Nina Khanna, Urs Jenal, Alexander Harms
Phage Paride can kill dormant, antibiotic-tolerant cells of Pseudomonas aeruginosa by direct lytic replication. Nature communications 15 (1) (2024)
Curdin A Franziscus, Danilo Ritz, N Constantin Kappel, Jachen A Solinger, Alexander Schmidt, Anne Spang
The protein tyrosine phosphatase PPH-7 is required for fertility and embryonic development in C. elegans at elevated temperatures. FEBS open bio (2024)
Curdin A Franziscus, Danilo Ritz, N Constantin Kappel, Jachen A Solinger, Alexander Schmidt, Anne Spang
The protein tyrosine phosphatase PPH-7 is required for fertility and embryonic development in C. elegans at elevated temperatures. FEBS open bio 14 (3) (2024)
Meriç Ataman, Nitish Mittal, Lionel A Tintignac, Alexander Schmidt, Daniel J Ham, Asier González, Markus A Rüegg, Mihaela Zavolan
Calorie restriction and rapamycin distinctly mitigate aging-associated protein phosphorylation changes in mouse muscles. Communications biology 7 (1) (2024)
Klemens Fröhlich, Regula Furrer, Christian Schori, Christoph Handschin, Alexander Schmidt
Robust, Precise, and Deep Proteome Profiling Using a Small Mass Range and Narrow Window Data-Independent-Acquisition Scheme. Journal of proteome research 23 (3) (2024)
Klemens Fröhlich, Regula Furrer, Christian Schori, Christoph Handschin, Alexander Schmidt
Robust, Precise, and Deep Proteome Profiling Using a Small Mass Range and Narrow Window Data-Independent-Acquisition Scheme. Journal of proteome research 23 (3) (2024)
Curdin A Franziscus, Danilo Ritz, N Constantin Kappel, Jachen A Solinger, Alexander Schmidt, Anne Spang
The protein tyrosine phosphatase PPH-7 is required for fertility and embryonic development in C. elegans at elevated temperatures. FEBS open bio 14 (3) (2024)
Klemens Fröhlich, Regula Furrer, Christian Schori, Christoph Handschin, Alexander Schmidt
Robust, Precise, and Deep Proteome Profiling Using a Small Mass Range and Narrow Window Data-Independent-Acquisition Scheme. Journal of proteome research 23 (3) (2024)
Nitish Mittal, Meric Ataman, Lionel A Tintignac, Daniel J Ham, Lena Jörin, Alexander Schmidt, Michael Sinnreich, Markus A Ruegg, Mihaela Zavolan
Calorie restriction and rapamycin distinctly restore non-canonical ORF translation in the muscles of aging mice. NPJ Regenerative medicine 9 (1) (2024)
Klemens Fröhlich, Regula Furrer, Christian Schori, Christoph Handschin, Alexander Schmidt
Robust, Precise, and Deep Proteome Profiling Using a Small Mass Range and Narrow Window Data-Independent-Acquisition Scheme. Journal of proteome research (2024)
Curdin A Franziscus, Danilo Ritz, N Constantin Kappel, Jachen A Solinger, Alexander Schmidt, Anne Spang
The protein tyrosine phosphatase PPH-7 is required for fertility and embryonic development in C. elegans at elevated temperatures. FEBS open bio 14 (3) (2024)
Enea Maffei, Anne-Kathrin Woischnig, Marco R Burkolter, Yannik Heyer, Dorentina Humolli, Nicole Thürkauf, Thomas Bock, Alexander Schmidt, Pablo Manfredi, Adrian Egli, Nina Khanna, Urs Jenal, Alexander Harms
Phage Paride can kill dormant, antibiotic-tolerant cells of Pseudomonas aeruginosa by direct lytic replication. Nature communications 15 (1) (2024)
Marcus Borenäs, Ganesh Umapathy, Dan Emil Lind, Wei-Yun Lai, Jikui Guan, Joel Johansson, Eva Jennische, Alexander Schmidt, Yeshwant Kurhe, Jonatan L Gabre, Agata Aniszewska, Anneli Strömberg, Mats Bemark, Michael N Hall, Jimmy Van den Eynden, Bengt Hallberg, Ruth H Palmer
ALK signaling primes the DNA damage response sensitizing ALK-driven neuroblastoma to therapeutic ATR inhibition. Proceedings of the National Academy of Sciences of the United States of America 121 (1) (2023)
Basil T Thommen, Jerzy M Dziekan, Fiona Achcar, Seth Tjia, Armin Passecker, Katarzyna Buczak, Christin Gumpp, Alexander Schmidt, Matthias Rottmann, Christof Grüring, Matthias Marti, Zbynek Bozdech, Nicolas M B Brancucci
Genetic validation of Pf FKBP35 as an antimalarial drug target. eLife 12 (2023)
Joana Pinto Couto, Milica Vulin, Charly Jehanno, Marie-May Coissieux, Baptiste Hamelin, Alexander Schmidt, Robert Ivanek, Atul Sethi, Konstantin Bräutigam, Anja L Frei, Carolina Hager, Madhuri Manivannan, Jorge Gómez-Miragaya, Milan Ms Obradović, Zsuzsanna Varga, Viktor Hendrik Koelzer, Kirsten D Mertz, Mohamed Bentires-Alj
Nicotinamide N-methyltransferase sustains a core epigenetic program that promotes metastatic colonization in breast cancer. The EMBO journal (2023)
Marcus Borenäs, Ganesh Umapathy, Dan Emil Lind, Wei-Yun Lai, Jikui Guan, Joel Johansson, Eva Jennische, Alexander Schmidt, Yeshwant Kurhe, Jonatan L Gabre, Agata Aniszewska, Anneli Strömberg, Mats Bemark, Michael N Hall, Jimmy Van den Eynden, Bengt Hallberg, Ruth H Palmer
ALK signaling primes the DNA damage response sensitizing ALK-driven neuroblastoma to therapeutic ATR inhibition. Proceedings of the National Academy of Sciences of the United States of America 121 (1) (2023)
Marcus Borenäs, Ganesh Umapathy, Dan Emil Lind, Wei-Yun Lai, Jikui Guan, Joel Johansson, Eva Jennische, Alexander Schmidt, Yeshwant Kurhe, Jonatan L Gabre, Agata Aniszewska, Anneli Strömberg, Mats Bemark, Michael N Hall, Jimmy Van den Eynden, Bengt Hallberg, Ruth H Palmer
ALK signaling primes the DNA damage response sensitizing ALK-driven neuroblastoma to therapeutic ATR inhibition. Proceedings of the National Academy of Sciences of the United States of America 121 (1) (2023)
Marcus Borenäs, Ganesh Umapathy, Dan Emil Lind, Wei-Yun Lai, Jikui Guan, Joel Johansson, Eva Jennische, Alexander Schmidt, Yeshwant Kurhe, Jonatan L Gabre, Agata Aniszewska, Anneli Strömberg, Mats Bemark, Michael N Hall, Jimmy Van den Eynden, Bengt Hallberg, Ruth H Palmer
ALK signaling primes the DNA damage response sensitizing ALK-driven neuroblastoma to therapeutic ATR inhibition. Proceedings of the National Academy of Sciences of the United States of America 121 (1) (2023)
Joaquín Pérez-Schindler, Bastian Kohl, Konstantin Schneider-Heieck, Aurel B Leuchtmann, Carlos Henríquez Olguín, Volkan Adak, Geraldine Maier, Julien Delezie, Thomas Sakoparnig, Elyzabeth Vargas-Fernández, Bettina Karrer-Cardel, Danilo Ritz, Alexander Schmidt, Maria Hondele, Thomas E Jensen, Sebastian Hiller, Christoph Handschin
RNA-bound PGC-1α controls gene expression in liquid-like nuclear condensates. Proceedings of the National Academy of Sciences of the United States of America 118 (36) (2022)
Pablo Manfredi, Isabella Santi, Enea Maffei, Emmanuelle Lezan, Alexander Schmidt, Urs Jenal
Defining Proteomic Signatures to Predict Multidrug Persistence in Pseudomonas aeruginosa. Methods in molecular biology (Clifton, N.J.) 2357 (2022)
Charlotte C K Ng, Eva Dazert, Tuyana Boldanova, Mairene Coto-Llerena, Sandro Nuciforo, Caner Ercan, Aleksei Suslov, Marie-Anne Meier, Thomas Bock, Alexander Schmidt, Sylvia Ketterer, Xueya Wang, Stefan F Wieland, Matthias S Matter, Marco Colombi, Salvatore Piscuoglio, Luigi M Terracciano, Michael N Hall, Markus H Heim
Integrative proteogenomic characterization of hepatocellular carcinoma across etiologies and stages. Nature communications 13 (1) (2022)
Bram Van den Bergh, Hannah Schramke, Joran Elie Michiels, Tom E P Kimkes, Jakub Leszek Radzikowski, Johannes Schimpf, Silke R Vedelaar, Sabrina Burschel, Liselot Dewachter, Nikola Lončar, Alexander Schmidt, Tim Meijer, Maarten Fauvart, Thorsten Friedrich, Jan Michiels, Matthias Heinemann
Mutations in respiratory complex I promote antibiotic persistence through alterations in intracellular acidity and protein synthesis. Nature communications 13 (1) (2022)
Matteo Mori, Zhongge Zhang, Amir Banaei-Esfahani, Jean-Beno Æt Lalanne, Hiroyuki Okano, Ben C Collins, Alexander Schmidt, Olga T Schubert, Deok-Sun Lee, Gene-Wei Li, Ruedi Aebersold, Terence Hwa, Christina Ludwig
From coarse to fine: the absolute Escherichia coli proteome under diverse growth conditions. Molecular systems biology 17 (5) (2022)
Ricardo Adaixo, Eva M Steiner, Ricardo D Righetto, Alexander Schmidt, Henning Stahlberg, Nicholas M I Taylor
Cryo-EM structure of native human thyroglobulin. Nature communications 13 (1) (2022)
Milica Vulin, Charly Jehanno, Atul Sethi, Ana Luísa Correia, Milan M S Obradović, Joana Pinto Couto, Marie-May Coissieux, Maren Diepenbruck, Bogdan-Tiberius Preca, Katrin Volkmann, Priska Auf der Maur, Alexander Schmidt, Simone Münst, Loïc Sauteur, Michal Kloc, Marta Palafox, Adrian Britschgi, Vincent Unterreiner, Olaf Galuba, Isabelle Claerr, Sandra Lopez-Romero, Giorgio Giacomo Galli, Daniel Baeschlin, Ryoko Okamoto, Savas D Soysal, Robert Mechera, Walter P Weber, Thomas Radimerski, Mohamed Bentires-Alj
A high-throughput drug screen reveals means to differentiate triple-negative breast cancer. Oncogene 41 (39) (2022)
Corinne Hübers, Ashik Ahmed Abdul Pari, Denise Grieshober, Martin Petkov, Alexander Schmidt, Tatjana Messmer, Christian Moritz Heyer, Sebastian Schölch, Stephanie S Kapel, Nicolas Gengenbacher, Mahak Singhal, Benjamin Schieb, Claudine Fricke, Rainer Will, Kim Remans, Jochen Sven Utikal, Christoph Reissfelder, Matthias Schlesner, Kairbaan M Hodivala-Dilke, Sander Kersten, Sergij Goerdt, Hellmut G Augustin, Felcht Moritz
Primary tumor-derived systemic nANGPTL4 inhibits metastasis. The Journal of experimental medicine 220 (1) (2022)
Klemens Fröhlich, Eva Brombacher, Matthias Fahrner, Daniel Vogele, Lucas Kook, Niko Pinter, Peter Bronsert, Sylvia Timme-Bronsert, Alexander Schmidt, Katja Baerenfaller, Clemens Kreutz, Oliver Schilling
Benchmarking of analysis strategies for data-independent acquisition proteomics using a large-scale dataset comprising inter-patient heterogeneity. Nature communications 13 (1) (2022)
Elisabeth Lambert, Ahmad Reza Mehdipour, Alexander Schmidt, Gerhard Hummer, Camilo Perez
Evidence for a trap-and-flip mechanism in a proton-dependent lipid transporter. Nature communications 13 (1) (2022)
Ana Luísa Correia, Joao C Guimaraes, Priska Auf der Maur, Duvini De Silva, Marcel Philipp Trefny, Ryoko Okamoto, Sandro Bruno, Alexander Schmidt, Kirsten D Mertz, Katrin Volkmann, Luigi Terracciano, Alfred Zippelius, Marcus Vetter, Christian Kurzeder, Walter Paul Weber, Mohamed Bentires-Alj
Hepatic stellate cells suppress NK cell-sustained breast cancer dormancy. Nature 594 (7864) (2021)
Bianca Striednig, Ulrike Lanner, Selina Niggli, Ana Katic, Simone Vormittag, Sabrina Brülisauer, Ramon Hochstrasser, Andres Kaech, Amanda Welin, Antje Flieger, Urs Ziegler, Alexander Schmidt, Hubert Hilbi, Nicolas Personnic
Quorum sensing governs a transmissive Legionella subpopulation at the pathogen vacuole periphery. EMBO reports 22 (9) (2021)
Tohnyui Ndinyanka Fabrice, Thomas Fiedler, Vera Studer, Adrien Vinet, Francesco Brogna, Alexander Schmidt, Jean Pieters
Interactome and F-Actin Interaction Analysis of Dictyostelium discoideum Coronin A. International journal of molecular sciences 21 (4) (2020)
Bastian Kohl, Mitchell Brüderlin, Danilo Ritz, Alexander Schmidt, Sebastian Hiller
Protocol for High-Yield Production of Photo-Leucine-Labeled Proteins in Escherichia coli. Journal of proteome research 19 (8) (2020)
Alexander Schmidt, Hervé Farine, Marcel P Keller, Agata Sebastian, Lukasz Kozera, Richard W D Welford, Daniel S Strasser
Immunoaffinity Targeted Mass Spectrometry Analysis of Human Plasma Samples Reveals an Imbalance of Active and Inactive CXCL10 in Primary Sjögren's Syndrome Disease Patients. Journal of proteome research 19 (10) (2020)
Athanasios Litsios, Daphne H E W Huberts, Hanna M Terpstra, Paolo Guerra, Alexander Schmidt, Katarzyna Buczak, Alexandros Papagiannakis, Mattia Rovetta, Johan Hekelaar, Georg Hubmann, Marten Exterkate, Andreas Milias-Argeitis, Matthias Heinemann
Differential scaling between G1 protein production and cell size dynamics promotes commitment to the cell division cycle in budding yeast. Nature cell biology 21 (11) (2019)
Nicolas Personnic, Bianca Striednig, Emmanuelle Lezan, Christian Manske, Amanda Welin, Alexander Schmidt, Hubert Hilbi
Quorum sensing modulates the formation of virulent Legionella persisters within infected cells. Nature communications 10 (1) (2019)
Anne-Valérie Burgener, Glenn R Bantug, Benedikt J Meyer, Rebecca Higgins, Adhideb Ghosh, Olivier Bignucolo, Eric H Ma, Jordan Loeliger, Gunhild Unterstab, Marco Geigges, Rebekah Steiner, Michel Enamorado, Robert Ivanek, Danielle Hunziker, Alexander Schmidt, Bojana Müller-Durovic, Jasmin Grählert, Raja Epple, Sarah Dimeloe, Jonas Lötscher, Ursula Sauder, Monika Ebnöther, Bettina Burger, Ingmar Heijnen, Sarai Martínez-Cano, Nathan Cantoni, Rolf Brücker, Christian R Kahlert, David Sancho, Russell G Jones, Alexander Navarini, Mike Recher, Christoph Hess
SDHA gain-of-function engages inflammatory mitochondrial retrograde signaling via KEAP1-Nrf2. Nature immunology 20 (10) (2019)
Joëlle Jourdan, Annabelle Walz, Hugues Matile, Alexander Schmidt, Jianbo Wu, Xiaofang Wang, Yuxiang Dong, Jonathan L Vennerstrom, Remo S Schmidt, Sergio Wittlin, Pascal Mäser
Stochastic Protein Alkylation by Antimalarial Peroxides. ACS infectious diseases 5 (12) (2019)
Lin Lin, Emmanuelle Lezan, Alexander Schmidt, Marek Basler
Abundance of bacterial Type VI secretion system components measured by targeted proteomics. Nature communications 10 (1) (2019)
Andrea Riba, Noemi Di Nanni, Nitish Mittal, Erik Arhné, Alexander Schmidt, Mihaela Zavolan
Protein synthesis rates and ribosome occupancies reveal determinants of translation elongation rates. Proceedings of the National Academy of Sciences of the United States of America 116 (30) (2019)
Roland Felix Dreier, Erik Ahrné, Petr Broz, Alexander Schmidt
Global Ion Suppression Limits the Potential of Mass Spectrometry Based Phosphoproteomics. Journal of proteome research 18 (1) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Alexander Schmidt