Argyris Papantonis

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 40

Top Venues

Aging cell

Nature communications

Cancer research communications

Science advances

University Medical Center Goettingen

National and Kapodistrian University of Athens - Faculty of Biology (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University Medical Center Goettingen

Germany

Professor for Translational Epigenetics :: Institute of Pathology

University of Cologne

Germany

Junior Research Group Leader :: Centre for Molecular Medicine

University College, University of Oxford

United Kingdom

Lecturer in Biochemistry

University of Oxford

United Kingdom

Post-doctoral researcher :: Sir William Dunn School of Pathology

Lincoln College, University of Oxford

United Kingdom

Kemp Junior Research Fellow for the Medical Sciences

Education History

National and Kapodistrian University of Athens - Faculty of Biology

Greece

PHD :: Biochemistry and Molecular Biology

Publications

Marcus Edelmann, Shuang Fan, Tiago De Oliveira, Tina Goldhardt, Dorothée Sartorius, Teona Midelashvili, Karly Conrads, Niels Benjamin Paul, Tim Beißbarth, Johannes Robert Fleischer, Moritz Leander Blume, Hanibal Bohnenberger, Natasa Josipovic, Argyris Papantonis, Michael Linnebacher, Leif Hendrik Dröge, Michael Ghadimi, Stefan Rieken, Lena-Christin Conradi
Tumor Vessel Normalization via PFKFB3 Inhibition Alleviates Hypoxia and Increases Tumor Necrosis in Rectal Cancer upon Radiotherapy. Cancer research communications 4 (8) (2024)
Marcus Edelmann, Shuang Fan, Tiago De Oliveira, Tina Goldhardt, Dorothée Sartorius, Teona Midelashvili, Karly Conrads, Niels Benjamin Paul, Tim Beißbarth, Johannes Robert Fleischer, Moritz Leander Blume, Hanibal Bohnenberger, Natasa Josipovic, Argyris Papantonis, Michael Linnebacher, Leif Hendrik Dröge, Michael Ghadimi, Stefan Rieken, Lena-Christin Conradi
Tumor Vessel Normalization via PFKFB3 Inhibition Alleviates Hypoxia and Increases Tumor Necrosis in Rectal Cancer upon Radiotherapy. Cancer research communications 4 (8) (2024)
Spiros Palikyras, Konstantinos Sofiadis, Athanasia Stavropoulou, Adi Danieli-Mackay, Vassiliki Varamogianni-Mamatsi, David Hörl, Simona Nasiscionyte, Yajie Zhu, Ioanna Papadionysiou, Antonis Papadakis, Natasa Josipovic, Anne Zirkel, Aoife O'Connell, Gary Loughran, James Keane, Audrey Michel, Wolfgang Wagner, Andreas Beyer, Hartmann Harz, Heinrich Leonhardt, Grazvydas Lukinavicius, Christoforos Nikolaou, Argyris Papantonis
Rapid and synchronous chemical induction of replicative-like senescence via a small molecule inhibitor. Aging cell 23 (4) (2024)
Emre Taylan Duman, Maren Sitte, Karly Conrads, Adi Mackay, Fabian Ludewig, Philipp Stroebel, Volker Ellenrieder, Elisabeth Hessmann, Argyris Papantonis, Gabriela Salinas-Riester
A single-cell strategy for the identification of intronic variants related to mis-splicing in pancreatic cancer. NAR genomics and bioinformatics 6 (2) (2024)
Marcus Edelmann, Shuang Fan, Tiago De Oliveira, Tina Goldhardt, Dorothée Sartorius, Teona Midelashvili, Karly Conrads, Niels Benjamin Paul, Tim Beißbarth, Johannes Robert Fleischer, Moritz Leander Blume, Hanibal Bohnenberger, Natasa Josipovic, Argyris Papantonis, Michael Linnebacher, Leif Hendrik Dröge, Michael Ghadimi, Stefan Rieken, Lena-Christin Conradi
Tumor vessel normalization via PFKFB3 inhibition alleviates hypoxia and increases tumor necrosis in rectal cancer upon radiotherapy. Cancer research communications (2024)
Marcus Edelmann, Shuang Fan, Tiago De Oliveira, Tina Goldhardt, Dorothée Sartorius, Teona Midelashvili, Karly Conrads, Niels Benjamin Paul, Tim Beißbarth, Johannes Robert Fleischer, Moritz Leander Blume, Hanibal Bohnenberger, Natasa Josipovic, Argyris Papantonis, Michael Linnebacher, Leif Hendrik Dröge, Michael Ghadimi, Stefan Rieken, Lena-Christin Conradi
Tumor Vessel Normalization via PFKFB3 Inhibition Alleviates Hypoxia and Increases Tumor Necrosis in Rectal Cancer upon Radiotherapy. Cancer research communications 4 (8) (2024)
Spiros Palikyras, Konstantinos Sofiadis, Athanasia Stavropoulou, Adi Danieli-Mackay, Vassiliki Varamogianni-Mamatsi, David Hörl, Simona Nasiscionyte, Yajie Zhu, Ioanna Papadionysiou, Antonis Papadakis, Natasa Josipovic, Anne Zirkel, Aoife O'Connell, Gary Loughran, James Keane, Audrey Michel, Wolfgang Wagner, Andreas Beyer, Hartmann Harz, Heinrich Leonhardt, Grazvydas Lukinavicius, Christoforos Nikolaou, Argyris Papantonis
Rapid and synchronous chemical induction of replicative-like senescence via a small molecule inhibitor. Aging cell 23 (4) (2024)
Spiros Palikyras, Konstantinos Sofiadis, Athanasia Stavropoulou, Adi Danieli-Mackay, Vassiliki Varamogianni-Mamatsi, David Hörl, Simona Nasiscionyte, Yajie Zhu, Ioanna Papadionysiou, Antonis Papadakis, Natasa Josipovic, Anne Zirkel, Aoife O'Connell, Gary Loughran, James Keane, Audrey Michel, Wolfgang Wagner, Andreas Beyer, Hartmann Harz, Heinrich Leonhardt, Grazvydas Lukinavicius, Christoforos Nikolaou, Argyris Papantonis
Rapid and synchronous chemical induction of replicative-like senescence via a small molecule inhibitor. Aging cell 23 (4) (2024)
Spiros Palikyras, Konstantinos Sofiadis, Athanasia Stavropoulou, Adi Danieli-Mackay, Vassiliki Varamogianni-Mamatsi, David Hörl, Simona Nasiscionyte, Yajie Zhu, Ioanna Papadionysiou, Antonis Papadakis, Natasa Josipovic, Anne Zirkel, Aoife O'Connell, Gary Loughran, James Keane, Audrey Michel, Wolfgang Wagner, Andreas Beyer, Hartmann Harz, Heinrich Leonhardt, Grazvydas Lukinavicius, Christoforos Nikolaou, Argyris Papantonis
Rapid and synchronous chemical induction of replicative-like senescence via a small molecule inhibitor. Aging cell (2024)
Spiros Palikyras, Konstantinos Sofiadis, Athanasia Stavropoulou, Adi Danieli-Mackay, Vassiliki Varamogianni-Mamatsi, David Hörl, Simona Nasiscionyte, Yajie Zhu, Ioanna Papadionysiou, Antonis Papadakis, Natasa Josipovic, Anne Zirkel, Aoife O'Connell, Gary Loughran, James Keane, Audrey Michel, Wolfgang Wagner, Andreas Beyer, Hartmann Harz, Heinrich Leonhardt, Grazvydas Lukinavicius, Christoforos Nikolaou, Argyris Papantonis
Rapid and synchronous chemical induction of replicative-like senescence via a small molecule inhibitor. Aging cell 23 (4) (2024)
Spiros Palikyras, Konstantinos Sofiadis, Athanasia Stavropoulou, Adi Danieli-Mackay, Vassiliki Varamogianni-Mamatsi, David Hörl, Simona Nasiscionyte, Yajie Zhu, Ioanna Papadionysiou, Antonis Papadakis, Natasa Josipovic, Anne Zirkel, Aoife O'Connell, Gary Loughran, James Keane, Audrey Michel, Wolfgang Wagner, Andreas Beyer, Hartmann Harz, Heinrich Leonhardt, Grazvydas Lukinavicius, Christoforos Nikolaou, Argyris Papantonis
Rapid and synchronous chemical induction of replicative-like senescence via a small molecule inhibitor. Aging cell 23 (4) (2024)
Emre Taylan Duman, Maren Sitte, Karly Conrads, Adi Mackay, Fabian Ludewig, Philipp Stroebel, Volker Ellenrieder, Elisabeth Hessmann, Argyris Papantonis, Gabriela Salinas-Riester
A single-cell strategy for the identification of intronic variants related to mis-splicing in pancreatic cancer. NAR genomics and bioinformatics 6 (2) (2024)
Mario Ivanković, Jeremias N Brand, Luca Pandolfini, Thomas Brown, Martin Pippel, Andrei Rozanski, Til Schubert, Markus A Grohme, Sylke Winkler, Laura Robledillo, Meng Zhang, Azzurra Codino, Stefano Gustincich, Miquel Vila-Farré, Shu Zhang, Argyris Papantonis, André Marques, Jochen C Rink
A comparative analysis of planarian genomes reveals regulatory conservation in the face of rapid structural divergence. Nature communications 15 (1) (2024)
Marcus Edelmann, Shuang Fan, Tiago De Oliveira, Tina Goldhardt, Dorothée Sartorius, Teona Midelashvili, Karly Conrads, Niels Benjamin Paul, Tim Beißbarth, Johannes Robert Fleischer, Moritz Leander Blume, Hanibal Bohnenberger, Natasa Josipovic, Argyris Papantonis, Michael Linnebacher, Leif Hendrik Dröge, Michael Ghadimi, Stefan Rieken, Lena-Christin Conradi
Tumor Vessel Normalization via PFKFB3 Inhibition Alleviates Hypoxia and Increases Tumor Necrosis in Rectal Cancer upon Radiotherapy. Cancer research communications 4 (8) (2024)
Ting Xie, Adi Danieli-Mackay, Mariachiara Buccarelli, Mariano Barbieri, Ioanna Papadionysiou, Q Giorgio D'Alessandris, Claudia Robens, Nadine Übelmesser, Omkar Suhas Vinchure, Liverana Lauretti, Giorgio Fotia, Roland F Schwarz, Xiao-Tao Wang, Lucia Ricci-Vitiani, Jay Gopalakrishnan, Roberto Pallini, Argyris Papantonis
Pervasive structural heterogeneity rewires glioblastoma chromosomes to sustain patient-specific transcriptional programs. Nature communications 15 (1) (2024)
Ting Xie, Adi Danieli-Mackay, Mariachiara Buccarelli, Mariano Barbieri, Ioanna Papadionysiou, Q Giorgio D'Alessandris, Claudia Robens, Nadine Übelmesser, Omkar Suhas Vinchure, Liverana Lauretti, Giorgio Fotia, Roland F Schwarz, Xiao-Tao Wang, Lucia Ricci-Vitiani, Jay Gopalakrishnan, Roberto Pallini, Argyris Papantonis
Pervasive structural heterogeneity rewires glioblastoma chromosomes to sustain patient-specific transcriptional programs. Nature communications 15 (1) (2024)
Ting Xie, Adi Danieli-Mackay, Mariachiara Buccarelli, Mariano Barbieri, Ioanna Papadionysiou, Q Giorgio D'Alessandris, Claudia Robens, Nadine Übelmesser, Omkar Suhas Vinchure, Liverana Lauretti, Giorgio Fotia, Roland F Schwarz, Xiao-Tao Wang, Lucia Ricci-Vitiani, Jay Gopalakrishnan, Roberto Pallini, Argyris Papantonis
Pervasive structural heterogeneity rewires glioblastoma chromosomes to sustain patient-specific transcriptional programs. Nature communications 15 (1) (2024)
Deniz Bartsch, Kaustubh Kalamkar, Gaurav Ahuja, Jan-Wilm Lackmann, Juergen Hescheler, Timm Weber, Hisham Bazzi, Massimiliano Clamer, Sasha Mendjan, Argyris Papantonis, Leo Kurian
mRNA translational specialization by RBPMS presets the competence for cardiac commitment in hESCs. Science advances 9 (13) (2023)
Deniz Bartsch, Kaustubh Kalamkar, Gaurav Ahuja, Jan-Wilm Lackmann, Juergen Hescheler, Timm Weber, Hisham Bazzi, Massimiliano Clamer, Sasha Mendjan, Argyris Papantonis, Leo Kurian
mRNA translational specialization by RBPMS presets the competence for cardiac commitment in hESCs. Science advances 9 (13) (2023)
Antonios Papadakis, Akos Gyenis, Joris Pothof, Jan H J Hoeijmakers, Argyris Papantonis, Andreas Beyer
Age-associated transcriptional stress due to accelerated elongation and increased stalling of RNAPII. Nature genetics (2023)
Tom Sexton, Angeliki Platania, Cathie Erb, Mariano Barbieri, Bastien Molcrette, Erwan Grandgirard, Marit de Kort, Karen Meaburn, Tiegh Taylor, Virlana Shchuka, Silvia Kocanova, Guilherme Oliveira, Jennifer A Mitchell, Evi Soutoglou, Tineke L Lenstra, Nacho Molina, Argyris Papantonis, Kerstin Bystricky
Competition between transcription and loop extrusion modulates promoter and enhancer dynamics. Research square (2023)
Angeliki Platania, Cathie Erb, Mariano Barbieri, Bastien Molcrette, Erwan Grandgirard, Marit Ac de Kort, Karen Meaburn, Tiegh Taylor, Virlana M Shchuka, Silvia Kocanova, Guilherme Monteiro Oliveira, Jennifer A Mitchell, Evi Soutoglou, Tineke L Lenstra, Nacho Molina, Argyris Papantonis, Kerstin Bystricky, Tom Sexton
Competition between transcription and loop extrusion modulates promoter and enhancer dynamics. bioRxiv : the preprint server for biology (2023)
Elke Gabriel, Walid Albanna, Giovanni Pasquini, Anand Ramani, Natasa Josipovic, Aruljothi Mariappan, Maria Giovanna Riparbelli, Giuliano Callaini, Celeste M Karch, Olivier Goureau, Argyris Papantonis, Volker Busskamp, Toni Schneider, Jay Gopalakrishnan
Generation of iPSC-derived human forebrain organoids assembling bilateral eye primordia. Nature protocols (2023)
Angeliki Platania, Cathie Erb, Mariano Barbieri, Bastien Molcrette, Erwan Grandgirard, Marit Ac de Kort, Karen Meaburn, Tiegh Taylor, Virlana M Shchuka, Silvia Kocanova, Guilherme Monteiro Oliveira, Jennifer A Mitchell, Evi Soutoglou, Tineke L Lenstra, Nacho Molina, Argyris Papantonis, Kerstin Bystricky, Tom Sexton
Competition between transcription and loop extrusion modulates promoter and enhancer dynamics. bioRxiv : the preprint server for biology (2023)
Cédric Debès, Antonios Papadakis, Sebastian Grönke, Özlem Karalay, Luke S Tain, Athanasia Mizi, Shuhei Nakamura, Oliver Hahn, Carina Weigelt, Natasa Josipovic, Anne Zirkel, Isabell Brusius, Konstantinos Sofiadis, Mantha Lamprousi, Yu-Xuan Lu, Wenming Huang, Reza Esmaillie, Torsten Kubacki, Martin Richard Späth, Bernhard Schermer, Thomas Benzing, Roman-Ulrich Müller, Roberto Ripa, Linda Partridge, Argyris Papantonis, Andreas Beyer
Ageing-associated changes in transcriptional elongation influence longevity. Nature (2023)
Deniz Bartsch, Kaustubh Kalamkar, Gaurav Ahuja, Jan-Wilm Lackmann, Juergen Hescheler, Timm Weber, Hisham Bazzi, Massimiliano Clamer, Sasha Mendjan, Argyris Papantonis, Leo Kurian
mRNA translational specialization by RBPMS presets the competence for cardiac commitment in hESCs. Science advances 9 (13) (2023)
Angeliki Platania, Cathie Erb, Mariano Barbieri, Bastien Molcrette, Erwan Grandgirard, Marit Ac de Kort, Karen Meaburn, Tiegh Taylor, Virlana M Shchuka, Silvia Kocanova, Guilherme Monteiro Oliveira, Jennifer A Mitchell, Evi Soutoglou, Tineke L Lenstra, Nacho Molina, Argyris Papantonis, Kerstin Bystricky, Tom Sexton
Competition between transcription and loop extrusion modulates promoter and enhancer dynamics. bioRxiv : the preprint server for biology (2023)
Shu Zhang, Nadine Übelmesser, Mariano Barbieri, Argyris Papantonis
Enhancer-promoter contact formation requires RNAPII and antagonizes loop extrusion. Nature genetics (2023)
Natasa Josipovic, Karoline K Ebbesen, Anne Zirkel, Adi Danieli-Mackay, Christoph Dieterich, Leo Kurian, Thomas B Hansen, Argyris Papantonis
circRAB3IP modulates cell proliferation by reorganizing gene expression and mRNA processing in a paracrine manner. RNA (New York, N.Y.) 28 (11) (2022)
Konstantinos Sofiadis, Natasa Josipovic, Milos Nikolic, Yulia Kargapolova, Nadine Übelmesser, Vassiliki Varamogianni-Mamatsi, Anne Zirkel, Ioanna Papadionysiou, Gary Loughran, James Keane, Audrey Michel, Eduardo G Gusmao, Christian Becker, Janine Altmüller, Theodoros Georgomanolis, Athanasia Mizi, Argyris Papantonis
HMGB1 coordinates SASP-related chromatin folding and RNA homeostasis on the path to senescence. Molecular systems biology 17 (6) (2022)
Mengyu Tu, Lukas Klein, Elisa Espinet, Theodoros Georgomanolis, Florian Wegwitz, Xiaojuan Li, Laura Urbach, Adi Danieli-Mackay, Stefan Küffer, Kamil Bojarczuk, Athanasia Mizi, Ufuk Günesdogan, Bjoern Chapuy, Zuguang Gu, Albrecht Neesse, Uday Kishore, Philipp Ströbel, Elisabeth Hessmann, Stephan A Hahn, Flavia Carla Meotti, Argyris Papantonis, Volker Ellenrieder, Shiv K Singh
TNF-α-producing macrophages determine subtype identity and prognosis via AP1 enhancer reprogramming in pancreatic cancer. Nature cancer 2 (11) (2021)
Argyris Papantonis, Vassilis Roukos
Cohesin puts a break on distal homology hunt. Nature cell biology 23 (11) (2021)
Yulia Kargapolova, Rizwan Rehimi, Hülya Kayserili, Joanna Brühl, Konstantinos Sofiadis, Anne Zirkel, Spiros Palikyras, Athanasia Mizi, Yun Li, Gökhan Yigit, Alexander Hoischen, Stefan Frank, Nicole Russ, Jonathan Trautwein, Bregje van Bon, Christian Gilissen, Magdalena Laugsch, Eduardo Gade Gusmao, Natasa Josipovic, Janine Altmüller, Peter Nürnberg, Gernot Längst, Frank J Kaiser, Erwan Watrin, Han Brunner, Álvaro Rada-Iglesias, Leo Kurian, Bernd Wollnik, Karim Bouazoune, Argyris Papantonis
Overarching control of autophagy and DNA damage response by CHD6 revealed by modeling a rare human pathology. Nature communications 12 (1) (2021)
Julia Franzen, Theodoros Georgomanolis, Anton Selich, Chao-Chung Kuo, Reinhard Stöger, Lilija Brant, Melita Sara Mulabdić, Eduardo Fernandez-Rebollo, Clara Grezella, Alina Ostrowska, Matthias Begemann, Miloš Nikolić, Björn Rath, Anthony D Ho, Michael Rothe, Axel Schambach, Argyris Papantonis, Wolfgang Wagner
DNA methylation changes during long-term in vitro cell culture are caused by epigenetic drift. Communications biology 4 (1) (2021)
Shu Zhang, Nadine Übelmesser, Natasa Josipovic, Giada Forte, Johan A Slotman, Michael Chiang, Henrike Johanna Gothe, Eduardo Gade Gusmao, Christian Becker, Janine Altmüller, Adriaan B Houtsmuller, Vassilis Roukos, Kerstin S Wendt, Davide Marenduzzo, Argyris Papantonis
RNA polymerase II is required for spatial chromatin reorganization following exit from mitosis. Science advances 7 (43) (2021)
Karsten Rippe, Argyris Papantonis
RNA polymerase II transcription compartments: from multivalent chromatin binding to liquid droplet formation? Nature reviews. Molecular cell biology 22 (10) (2021)
Gaurav Ahuja, Deniz Bartsch, Wenjie Yao, Simon Geissen, Stefan Frank, Aitor Aguirre, Nicole Russ, Jan-Erik Messling, Joanna Dodzian, Kim A Lagerborg, Natalia Emilse Vargas, Joscha Sergej Muck, Susanne Brodesser, Stephan Baldus, Agapios Sachinidis, Juergen Hescheler, Christoph Dieterich, Aleksandra Trifunovic, Argyris Papantonis, Michael Petrascheck, Anna Klinke, Mohit Jain, Dario Riccardo Valenzano, Leo Kurian
Loss of genomic integrity induced by lysosphingolipid imbalance drives ageing in the heart. EMBO reports 20 (4) (2019)
Sinah-Sophia Weiterer, Johanna Meier-Soelch, Theodore Georgomanolis, Athanasia Mizi, Anna Beyerlein, Hendrik Weiser, Lilija Brant, Christin Mayr-Buro, Liane Jurida, Knut Beuerlein, Helmut Müller, Axel Weber, Ulas Tenekeci, Oliver Dittrich-Breiholz, Marek Bartkuhn, Andrea Nist, Thorsten Stiewe, Wilfred F J Van IJcken, Tabea Riedlinger, M Lienhard Schmitz, Argyris Papantonis, Michael Kracht
Distinct IL-1α-responsive enhancers promote acute and coordinated changes in chromatin topology in a hierarchical manner. The EMBO journal 39 (1) (2019)
Álvaro Rada-Iglesias, Frank G Grosveld, Argyris Papantonis
Forces driving the three-dimensional folding of eukaryotic genomes. Molecular systems biology 14 (6) (2018)
Lilija Brant, Theodore Georgomanolis, Milos Nikolic, Chris A Brackley, Petros Kolovos, Wilfred F J Van IJcken, Frank G Grosveld, Davide Marenduzzo, Argyris Papantonis
Exploiting native forces to capture chromosome conformation in mammalian cell nuclei. Molecular systems biology 12 (12) (2016)

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Publication Activity (10 Years)

Top Topics

Top Venues

Argyris Papantonis