Athma A Pai

ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 22

Top Venues

RNA (New York, N.Y.)

Nucleic acids research

bioRxiv : the preprint server for biology

PLoS genetics

University of Chicago (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

University of Chicago

United States

PHD :: Human Genetics

Publications

Ezequiel Hernán Calvo Roitberg, Christine L Carroll, Sergey V Venev, GyeungYun Kim, Steven T Mick, Job Dekker, Ana Fiszbein, Athma A Pai
mRNA initiation and termination are spatially coordinated. bioRxiv : the preprint server for biology (2024)
Leslie Torres-Ulloa, Ezequiel Hernán Calvo Roitberg, Athma A Pai
Genome-wide kinetic profiling of pre-mRNA 3' end cleavage. RNA (New York, N.Y.) 30 (3) (2024)
Ezequiel Hernán Calvo Roitberg, Christine L Carroll, Sergey V Venev, GyeungYun Kim, Steven T Mick, Job Dekker, Ana Fiszbein, Athma A Pai
mRNA initiation and termination are spatially coordinated. bioRxiv : the preprint server for biology (2024)
Leslie Torres-Ulloa, Ezequiel Hernán Calvo Roitberg, Athma A Pai
Genome-wide kinetic profiling of pre-mRNA 3' end cleavage. RNA (New York, N.Y.) 30 (3) (2024)
Ezequiel Hernán Calvo Roitberg, Christine L Carroll, Sergey V Venev, GyeungYun Kim, Steven T Mick, Job Dekker, Ana Fiszbein, Athma A Pai
mRNA initiation and termination are spatially coordinated. bioRxiv : the preprint server for biology (2024)
Leslie Torres-Ulloa, Ezequiel Hernán Calvo Roitberg, Athma A Pai
Genome-wide kinetic profiling of pre-mRNA 3' end cleavage. RNA (New York, N.Y.) 30 (3) (2024)
Leslie Torres-Ulloa, Ezequiel Hernán Calvo Roitberg, Athma A Pai
Genome-wide kinetic profiling of pre-mRNA 3' end cleavage. RNA (New York, N.Y.) 30 (3) (2024)
Leslie Torres-Ulloa, Ezequiel Hernán Calvo Roitberg, Athma A Pai
Genome-wide kinetic profiling of pre-mRNA 3' end cleavage. RNA (New York, N.Y.) 30 (3) (2024)
Feng Wang, Ezequiel Hernán Calvo Roitberg, Julia M Rembetsy-Brown, Minggang Fang, Jacquelyn Sousa, Zachary J Kartje, Pranathi Meda Krishnamurthy, Jonathan Lee, Michael R Green, Athma A Pai, Jonathan K Watts
G-rich motifs within phosphorothioate-based antisense oligonucleotides (ASOs) drive activation of FXN expression through indirect effects. Nucleic acids research 50 (22) (2023)
Feng Wang, Ezequiel Hernán Calvo Roitberg, Julia M Rembetsy-Brown, Minggang Fang, Jacquelyn Sousa, Zachary J Kartje, Pranathi Meda Krishnamurthy, Jonathan Lee, Michael R Green, Athma A Pai, Jonathan K Watts
G-rich motifs within phosphorothioate-based antisense oligonucleotides (ASOs) drive activation of FXN expression through indirect effects. Nucleic acids research 50 (22) (2023)
Feng Wang, Ezequiel Hernán Calvo Roitberg, Julia M Rembetsy-Brown, Minggang Fang, Jacquelyn Sousa, Zachary J Kartje, Pranathi Meda Krishnamurthy, Jonathan Lee, Michael R Green, Athma A Pai, Jonathan K Watts
G-rich motifs within phosphorothioate-based antisense oligonucleotides (ASOs) drive activation of FXN expression through indirect effects. Nucleic acids research 50 (22) (2023)
Leslie Torres-Ulloa, Ezequiel Hernán Calvo Roitberg, Athma A Pai
Genome-wide kinetic profiling of pre-mRNA 3' end cleavage. RNA (New York, N.Y.) (2023)
Feng Wang, Ezequiel Hernán Calvo Roitberg, Julia M Rembetsy-Brown, Minggang Fang, Jacquelyn Sousa, Zachary J Kartje, Pranathi Meda Krishnamurthy, Jonathan Lee, Michael R Green, Athma A Pai, Jonathan K Watts
G-rich motifs within phosphorothioate-based antisense oligonucleotides (ASOs) drive activation of FXN expression through indirect effects. Nucleic acids research 50 (22) (2023)
Ezequiel Hernán Calvo Roitberg, Rachel F Daniels, Athma A Pai
Challenges in identifying mRNA transcript starts and ends from long-read sequencing data. bioRxiv : the preprint server for biology (2023)
Leslie Torres-Ulloa, Ezequiel Hernán Calvo Roitberg, Athma A Pai
Genome-wide kinetic profiling of pre-mRNA 3' end cleavage. RNA (New York, N.Y.) (2023)
Ana Fiszbein, Michael McGurk, Ezequiel Hernán Calvo Roitberg, GyeungYun Kim, Christopher B Burge, Athma A Pai
Widespread occurrence of hybrid internal-terminal exons in human transcriptomes. Science advances 8 (3) (2022)
Feng Wang, Ezequiel Hernán Calvo Roitberg, Julia M Rembetsy-Brown, Minggang Fang, Jacquelyn Sousa, Zachary J Kartje, Pranathi Meda Krishnamurthy, Jonathan Lee, Michael R Green, Athma A Pai, Jonathan K Watts
G-rich motifs within phosphorothioate-based antisense oligonucleotides (ASOs) drive activation of FXN expression through indirect effects. Nucleic acids research (2022)
Athma A Pai, Francesca Luca
Environmental influences on RNA processing: Biochemical, molecular and genetic regulators of cellular response. Wiley interdisciplinary reviews. RNA 10 (1) (2018)
Athma A Pai, Joseph M Paggi, Paul Yan, Karen Adelman, Christopher B Burge
Numerous recursive sites contribute to accuracy of splicing in long introns in flies. PLoS genetics 14 (8) (2018)
Allison L Richards, Donovan Watza, Anthony Findley, Adnan Alazizi, Xiaoquan Wen, Athma A Pai, Roger Pique-Regi, Francesca Luca
Environmental perturbations lead to extensive directional shifts in RNA processing. PLoS genetics 13 (10) (2017)
Athma A Pai, Telmo Henriques, Kayla McCue, Adam Burkholder, Karen Adelman, Christopher B Burge
The kinetics of pre-mRNA splicing in the Drosophila genome and the influence of gene architecture. eLife 6 (2017)
Athma A Pai, Golshid Baharian, Ariane Pagé Sabourin, Jessica F Brinkworth, Yohann Nédélec, Joseph W Foley, Jean-Christophe Grenier, Katherine J Siddle, Anne Dumaine, Vania Yotova, Zachary P Johnson, Robert E Lanford, Christopher B Burge, Luis B Barreiro
Widespread Shortening of 3' Untranslated Regions and Increased Exon Inclusion Are Evolutionarily Conserved Features of Innate Immune Responses to Infection. PLoS genetics 12 (9) (2016)

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Publication Activity (10 Years)

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Athma A Pai