Audrey P Gasch (Audrey Gasch)

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 32

Top Topics

Network Analysis

Binding Protein

Saccharomyces Cerevisiae

Top Venues

bioRxiv : the preprint server for biology

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Julie Rojas, James Hose, H Auguste Dutcher, Michael Place, John F Wolters, Chris Todd Hittinger, Audrey P Gasch
Comparative modeling reveals the molecular determinants of aneuploidy fitness cost in a wild yeast model. bioRxiv : the preprint server for biology (2024)
Noah M Lancaster, Pavel Sinitcyn, Patrick Forny, Trenton M Peters-Clarke, Caroline Fecher, Andrew J Smith, Evgenia Shishkova, Tabiwang N Arrey, Anna Pashkova, Margaret Lea Robinson, Nicholas L Arp, Jing Fan, Juli Hansen, Andrea Galmozzi, Lia R Serrano, Julie Rojas, Audrey P Gasch, Michael S Westphall, Hamish Stewart, Christian Hock, Eugen Damoc, David J Pagliarini, Vlad Zabrouskov, Joshua J Coon
Fast and deep phosphoproteome analysis with the Orbitrap Astral mass spectrometer. Nature communications 15 (1) (2024)
Leah E Escalante, James Hose, Hollis Howe, Norah Paulsen, Michael Place, Audrey P Gasch
Premature aging in aneuploid yeast is caused in part by aneuploidy-induced defects in Ribosome Quality Control. bioRxiv : the preprint server for biology (2024)
H Auguste Dutcher, James Hose, Hollis Howe, Julie Rojas, Audrey P Gasch
The response to single-gene duplication implicates translation as a key vulnerability in aneuploid yeast. bioRxiv : the preprint server for biology (2024)
Noah M Lancaster, Pavel Sinitcyn, Patrick Forny, Trenton M Peters-Clarke, Caroline Fecher, Andrew J Smith, Evgenia Shishkova, Tabiwang N Arrey, Anna Pashkova, Margaret Lea Robinson, Nicholas L Arp, Jing Fan, Juli Hansen, Andrea Galmozzi, Lia R Serrano, Julie Rojas, Audrey P Gasch, Michael S Westphall, Hamish Stewart, Christian Hock, Eugen Damoc, David J Pagliarini, Vlad Zabrouskov, Joshua J Coon
Fast and deep phosphoproteome analysis with the Orbitrap Astral mass spectrometer. Nature communications 15 (1) (2024)
H Auguste Dutcher, James Hose, Hollis Howe, Julie Rojas, Audrey P Gasch
The response to single-gene duplication implicates translation as a key vulnerability in aneuploid yeast. bioRxiv : the preprint server for biology (2024)
Julie Rojas, James Hose, H Auguste Dutcher, Michael Place, John F Wolters, Chris Todd Hittinger, Audrey P Gasch
Comparative modeling reveals the molecular determinants of aneuploidy fitness cost in a wild yeast model. bioRxiv : the preprint server for biology (2024)
Noah M Lancaster, Pavel Sinitcyn, Patrick Forny, Trenton M Peters-Clarke, Caroline Fecher, Andrew J Smith, Evgenia Shishkova, Tabiwang N Arrey, Anna Pashkova, Margaret Lea Robinson, Nicholas L Arp, Jing Fan, Juli Hansen, Andrea Galmozzi, Lia R Serrano, Julie Rojas, Audrey P Gasch, Michael S Westphall, Hamish Stewart, Christian Hock, Eugen Damoc, David J Pagliarini, Vlad Zabrouskov, Joshua J Coon
Fast and deep phosphoproteome analysis with the Orbitrap Astral mass spectrometer. Nature communications 15 (1) (2024)
Julie Rojas, James Hose, H Auguste Dutcher, Michael Place, John F Wolters, Chris Todd Hittinger, Audrey P Gasch
Comparative modeling reveals the molecular determinants of aneuploidy fitness cost in a wild yeast model. bioRxiv : the preprint server for biology (2024)
H Auguste Dutcher, Audrey P Gasch
Investigating the role of RNA-binding protein Ssd1 in aneuploidy tolerance through network analysis. bioRxiv : the preprint server for biology (2024)
Leah E Escalante, James Hose, Hollis Howe, Norah Paulsen, Michael Place, Audrey P Gasch
Premature aging in aneuploid yeast is caused in part by aneuploidy-induced defects in Ribosome Quality Control. bioRxiv : the preprint server for biology (2024)
Julie Rojas, James Hose, H Auguste Dutcher, Michael Place, John F Wolters, Chris Todd Hittinger, Audrey P Gasch
Comparative modeling reveals the molecular determinants of aneuploidy fitness cost in a wild yeast model. bioRxiv : the preprint server for biology (2024)
H Auguste Dutcher, James Hose, Hollis Howe, Julie Rojas, Audrey P Gasch
The response to single-gene duplication implicates translation as a key vulnerability in aneuploid yeast. bioRxiv : the preprint server for biology (2024)
Noah M Lancaster, Pavel Sinitcyn, Patrick Forny, Trenton M Peters-Clarke, Caroline Fecher, Andrew J Smith, Evgenia Shishkova, Tabiwang N Arrey, Anna Pashkova, Margaret Lea Robinson, Nicholas L Arp, Jing Fan, Juli Hansen, Andrea Galmozzi, Lia R Serrano, Julie Rojas, Audrey P Gasch, Michael S Westphall, Hamish Stewart, Christian Hock, Eugen Damoc, David J Pagliarini, Vlad Zabrouskov, Joshua J Coon
Fast and deep phosphoproteome analysis with the Orbitrap Astral mass spectrometer. Nature communications 15 (1) (2024)
Julie Rojas, James Hose, H Auguste Dutcher, Michael Place, John F Wolters, Chris Todd Hittinger, Audrey P Gasch
Comparative modeling reveals the molecular determinants of aneuploidy fitness cost in a wild yeast model. bioRxiv : the preprint server for biology (2024)
H Auguste Dutcher, James Hose, Hollis Howe, Julie Rojas, Audrey P Gasch
The response to single-gene duplication implicates translation as a key vulnerability in aneuploid yeast. bioRxiv : the preprint server for biology (2024)
DeElegant Robinson, Elena Vanacloig-Pedros, Ruoyi Cai, Michael Place, James Hose, Audrey P Gasch
Gene-by-environment interactions influence the fitness cost of gene copy-number variation in yeast. G3 (Bethesda, Md.) (2023)
Ellen R Wagner, Audrey P Gasch
Advances in S. cerevisiae Engineering for Xylose Fermentation and Biofuel Production: Balancing Growth, Metabolism, and Defense. Journal of fungi (Basel, Switzerland) 9 (8) (2023)
Ellen R Wagner, Nicole M Nightingale, Annie Jen, Katherine A Overmyer, Mick McGee, Joshua J Coon, Audrey P Gasch
PKA regulatory subunit Bcy1 couples growth, lipid metabolism, and fermentation during anaerobic xylose growth in Saccharomyces cerevisiae. PLoS genetics 19 (7) (2023)
Andrew C Bergen, Rachel A Kocik, James Hose, Megan N McClean, Audrey P Gasch
Modeling single-cell phenotypes links yeast stress acclimation to transcriptional repression and pre-stress cellular states. eLife 11 (2022)
DeElegant Robinson, Michael Place, James Hose, Adam Jochem, Audrey P Gasch
Natural variation in the consequences of gene overexpression and its implications for evolutionary trajectories. eLife 10 (2021)
Matthew E MacGilvray, Evgenia Shishkova, Michael Place, Ellen R Wagner, Joshua J Coon, Audrey P Gasch
Phosphoproteome Response to Dithiothreitol Reveals Unique Versus Shared Features of Saccharomyces cerevisiae Stress Responses. Journal of proteome research 19 (8) (2020)
James Hose, Leah E Escalante, Katie J Clowers, H Auguste Dutcher, DeElegant Robinson, Venera Bouriakov, Joshua J Coon, Evgenia Shishkova, Audrey P Gasch
The genetic basis of aneuploidy tolerance in wild yeast. eLife 9 (2020)
Hayley R Stoneman, Russell L Wrobel, Michael Place, Michael Graham, David J Krause, Matteo De Chiara, Gianni Liti, Joseph Schacherer, Robert Landick, Audrey P Gasch, Trey K Sato, Chris Todd Hittinger
CRISpy-Pop: A Web Tool for Designing CRISPR/Cas9-Driven Genetic Modifications in Diverse Populations. G3 (Bethesda, Md.) 10 (11) (2020)
Kevin S Myers, Nicholas M Riley, Matthew E MacGilvray, Trey K Sato, Mick McGee, Justin Heilberger, Joshua J Coon, Audrey P Gasch
Rewired cellular signaling coordinates sugar and hypoxic responses for anaerobic xylose fermentation in yeast. PLoS genetics 15 (3) (2019)
Maria Sardi, Vaishnavi Paithane, Michael Place, De Elegant Robinson, James Hose, Dana J Wohlbach, Audrey P Gasch
Genome-wide association across Saccharomyces cerevisiae strains reveals substantial variation in underlying gene requirements for toxin tolerance. PLoS genetics 14 (2) (2018)
Matthew E MacGilvray, Evgenia Shishkova, Deborah A Chasman, Michael Place, Anthony Gitter, Joshua J Coon, Audrey P Gasch
Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response. PLoS computational biology 13 (5) (2018)
Yuriy Sverchkov, Yi-Hsuan Ho, Audrey P Gasch, Mark Craven
Context-Specific Nested Effects Models. Research in computational molecular biology : ... Annual International Conference, RECOMB ... : proceedings. RECOMB (Conference : 2005-) 10812 (2018)
Maria Sardi, Molly Krause, Justin Heilberger, Audrey P Gasch
Genotype-by-Environment-by-Environment Interactions in the Saccharomyces cerevisiae Transcriptomic Response to Alcohols and Anaerobiosis. G3 (Bethesda, Md.) 8 (12) (2018)
Audrey P Gasch, Feiqiao Brian Yu, James Hose, Leah E Escalante, Mike Place, Rhonda Bacher, Jad Kanbar, Doina Ciobanu, Laura Sandor, Igor V Grigoriev, Christina Kendziorski, Stephen R Quake, Megan N McClean
Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress. PLoS biology 15 (12) (2017)
James Hose, Chris Mun Yong, Maria Sardi, Zhishi Wang, Michael A Newton, Audrey P Gasch
Correction: Dosage compensation can buffer copy-number variation in wild yeast. eLife 5 (2016)
Audrey P Gasch, James Hose, Michael A Newton, Maria Sardi, Mun Yong, Zhishi Wang
Further support for aneuploidy tolerance in wild yeast and effects of dosage compensation on gene copy-number evolution. eLife 5 (2016)
Yi-Hsuan Ho, Audrey P Gasch
Exploiting the yeast stress-activated signaling network to inform on stress biology and disease signaling. Current genetics 61 (4) (2015)