Christopher J R Illingworth (Christopher Jr Illingworth)

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 25

Top Venues

Virus evolution

eLife

PLoS pathogens

Journal of the Royal Society, Interface

University of Cambridge

University of Essex (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Cambridge

United Kingdom

Sir Henry Dale Fellow :: Genetics

Wellcome Trust Sanger Institute

United Kingdom

Postdoctoral Fellow :: Informatics

University of Essex

United Kingdom

Senior Research Associate :: Biological Sciences

University of Oxford

United Kingdom

Postdoctoral Research Associate :: Physical and Theoretical Chemistry

Education History

University of Essex

United Kingdom

PHD :: Biological Sciences

Publications

Christopher J R Illingworth, Jose A Guerra-Assuncao, Samuel Gregg, Oscar Charles, Juanita Pang, Sunando Roy, Rana Abdelnabi, Johan Neyts, Judith Breuer
Genetic consequences of effective and suboptimal dosing with mutagenic drugs in a hamster model of SARS-CoV-2 infection. Virus evolution 10 (1) (2024)
Patrick Sinclair, Lei Zhao, Clive B Beggs, Christopher J R Illingworth
The airborne transmission of viruses causes tight transmission bottlenecks. Nature communications 15 (1) (2024)
John A Fozard, Emma C Thomson, Christopher J R Illingworth
Epidemiological inference at the threshold of data availability: an influenza A(H1N2)v spillover event in the United Kingdom. Journal of the Royal Society, Interface 21 (217) (2024)
Patrick Sinclair, Lei Zhao, Clive B Beggs, Christopher J R Illingworth
The airborne transmission of viruses causes tight transmission bottlenecks. Nature communications 15 (1) (2024)
John A Fozard, Emma C Thomson, Christopher J R Illingworth
Epidemiological inference at the threshold of data availability: an influenza A(H1N2)v spillover event in the United Kingdom. Journal of the Royal Society, Interface 21 (217) (2024)
Christopher J R Illingworth, Jose A Guerra-Assuncao, Samuel Gregg, Oscar Charles, Juanita Pang, Sunando Roy, Rana Abdelnabi, Johan Neyts, Judith Breuer
Genetic consequences of effective and suboptimal dosing with mutagenic drugs in a hamster model of SARS-CoV-2 infection. Virus evolution 10 (1) (2024)
Christopher J R Illingworth, Jose A Guerra-Assuncao, Samuel Gregg, Oscar Charles, Juanita Pang, Sunando Roy, Rana Abdelnabi, Johan Neyts, Judith Breuer
Genetic consequences of effective and suboptimal dosing with mutagenic drugs in a hamster model of SARS-CoV-2 infection. Virus evolution 10 (1) (2024)
Christopher J R Illingworth, Jose A Guerra-Assuncao, Samuel Gregg, Oscar Charles, Juanita Pang, Sunando Roy, Rana Abdelnabi, Johan Neyts, Judith Breuer
Genetic consequences of effective and suboptimal dosing with mutagenic drugs in a hamster model of SARS-CoV-2 infection. Virus evolution 10 (1) (2024)
John A Fozard, Emma C Thomson, Christopher J R Illingworth
Epidemiological inference at the threshold of data availability: an influenza A(H1N2)v spillover event in the United Kingdom. Journal of the Royal Society, Interface 21 (217) (2024)
Paul Flowers, Ruth Leiser, Fiona Mapp, Julie McLeod, Oliver T Stirrup, Christopher J R Illingworth, James Blackstone, Judith Breuer
A qualitative process evaluation using the behaviour change wheel approach: Did a whole genome sequence report form (SRF) used to reduce nosocomial SARS-CoV-2 within UK hospitals operate as anticipated? British journal of health psychology (2023)
Christopher J R Illingworth, William L Hamilton, Christopher Jackson, Ben Warne, Ashley Popay, Luke Meredith, Myra Hosmillo, Aminu Jahun, Tom Fieldman, Matthew Routledge, Charlotte J Houldcroft, Laura Caller, Sarah Caddy, Anna Yakovleva, Grant Hall, Fahad A Khokhar, Theresa Feltwell, Malte L Pinckert, Iliana Georgana, Yasmin Chaudhry, Martin Curran, Surendra Parmar, Dominic Sparkes, Lucy Rivett, Nick K Jones, Sushmita Sridhar, Sally Forrest, Tom Dymond, Kayleigh Grainger, Chris Workman, Effrossyni Gkrania-Klotsas, Nicholas M Brown, Michael P Weekes, Stephen Baker, Sharon J Peacock, Theodore Gouliouris, Ian Goodfellow, Daniela De Angelis, M Estée Török
A2B-COVID: A Tool for Rapidly Evaluating Potential SARS-CoV-2 Transmission Events. Molecular biology and evolution 39 (3) (2022)
Lenka Stejskal, Mphatso D Kalemera, Charlotte B Lewis, Machaela Palor, Lucas Walker, Tina Daviter, William D Lees, David S Moss, Myrto Kremyda-Vlachou, Zisis Kozlakidis, Giulia Gallo, Dalan Bailey, William M Rosenberg, Christopher J R Illingworth, Adrian J Shepherd, Joe Grove
An entropic safety catch controls hepatitis C virus entry and antibody resistance. eLife 11 (2022)
Mark Ferris, Rebecca Ferris, Chris Workman, Eoin O'Connor, David A Enoch, Emma Goldesgeyme, Natalie Quinnell, Parth Patel, Jo Wright, Geraldine Martell, Christine Moody, Ashley Shaw, Christopher J R Illingworth, Nicholas J Matheson, Michael P Weekes
Efficacy of FFP3 respirators for prevention of SARS-CoV-2 infection in healthcare workers. eLife 10 (2021)
Christopher J R Illingworth, William L Hamilton, Ben Warne, Matthew Routledge, Ashley Popay, Chris Jackson, Tom Fieldman, Luke W Meredith, Charlotte J Houldcroft, Myra Hosmillo, Aminu S Jahun, Laura G Caller, Sarah L Caddy, Anna Yakovleva, Grant Hall, Fahad A Khokhar, Theresa Feltwell, Malte L Pinckert, Iliana Georgana, Yasmin Chaudhry, Martin D Curran, Surendra Parmar, Dominic Sparkes, Lucy Rivett, Nick K Jones, Sushmita Sridhar, Sally Forrest, Tom Dymond, Kayleigh Grainger, Chris Workman, Mark Ferris, Effrossyni Gkrania-Klotsas, Nicholas M Brown, Michael P Weekes, Stephen Baker, Sharon J Peacock, Ian G Goodfellow, Theodore Gouliouris, Daniela de Angelis, Michelle S Toleman
Superspreaders drive the largest outbreaks of hospital onset COVID-19 infections. eLife 10 (2021)
Casper K Lumby, Lei Zhao, Judith Breuer, Christopher J R Illingworth
A large effective population size for established within-host influenza virus infection. eLife 9 (2020)
Mahan Ghafari, Casper K Lumby, Daniel B Weissman, Christopher J R Illingworth
Inferring Transmission Bottleneck Size from Viral Sequence Data Using a Novel Haplotype Reconstruction Method. Journal of virology 94 (13) (2020)
Christopher J R Illingworth, Jayna Ragwani, David Serwadda, Nelson K Sewankambo, Merlin L Robb, Michael A Eller, Andrew R Redd, Thomas C Quinn, Katrina A Lythgoe
A de novo approach to inferring within-host fitness effects during untreated HIV-1 infection. PLoS pathogens 16 (6) (2020)
Mphatso D Kalemera, Dilyana Mincheva, Joe Grove, Christopher J R Illingworth
Building a mechanistic mathematical model of hepatitis C virus entry. PLoS computational biology 15 (3) (2019)
Lei Zhao, Christopher J R Illingworth
Measurements of intrahost viral diversity require an unbiased diversity metric. Virus evolution 5 (1) (2019)
Lei Zhao, Ali B Abbasi, Christopher J R Illingworth
Mutational load causes stochastic evolutionary outcomes in acute RNA viral infection. Virus evolution 5 (1) (2019)
Casper K Lumby, Nuno R Nene, Christopher J R Illingworth
A novel framework for inferring parameters of transmission from viral sequence data. PLoS genetics 14 (10) (2018)
Adam J Reid, Arthur M Talman, Hayley M Bennett, Ana R Gomes, Mandy J Sanders, Christopher J R Illingworth, Oliver Billker, Matthew Berriman, Mara N K Lawniczak
Single-cell RNA-seq reveals hidden transcriptional variation in malaria parasites. eLife 7 (2018)
Nuno R Nené, Alistair S Dunham, Christopher J R Illingworth
Inferring Fitness Effects from Time-Resolved Sequence Data with a Delay-Deterministic Model. Genetics 209 (1) (2018)
Ashley Sobel Leonard, Micah T McClain, Gavin J D Smith, David E Wentworth, Rebecca A Halpin, Xudong Lin, Amy Ransier, Timothy B Stockwell, Suman R Das, Anthony S Gilbert, Robert Lambkin-Williams, Geoffrey S Ginsburg, Christopher W Woods, Katia Koelle, Christopher J R Illingworth
The effective rate of influenza reassortment is limited during human infection. PLoS pathogens 13 (2) (2017)
Hussein M Abkallo, Axel Martinelli, Megumi Inoue, Abhinay Ramaprasad, Phonepadith Xangsayarath, Jesse N Gitaka, Jianxia Tang, Kazuhide Yahata, Augustin Zoungrana, Hayato Mitaka, Arita Acharjee, Partha P Datta, Paul Hunt, Richard Carter, Osamu Kaneko, Ville Mustonen, Christopher J R Illingworth, Arnab Pain, Richard Culleton
Rapid identification of genes controlling virulence and immunity in malaria parasites. PLoS pathogens 13 (7) (2017)

Christopher J R Illingworth.css-eqlu8i{font-size:small;padding-left:4px;} (Christopher Jr Illingworth)

Publication Activity (10 Years)

Top Topics

Top Venues

Christopher J R Illingworth (Christopher Jr Illingworth)