Daron M Standley

ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 18

Top Venues

Applied microbiology and biotechnology

Science signaling

Briefings in bioinformatics

Bioinformatics advances

Osaka University

Columbia University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Osaka University Nov 01 2016

Japan

Professor :: Research Center for Microbial Diseases

Education History

Columbia University May 01 1993 - Sep 01 1998

United States

PHD :: chemistry

Harvey Mudd College May 01 1989

United States

BSC :: physics

Publications

Zichang Xu, Hendra S Ismanto, Dianita S Saputri, Soichiro Haruna, Guanqun Sun, Jan Wilamowski, Shunsuke Teraguchi, Ayan Sengupta, Songling Li, Daron M Standley
Robust detection of infectious disease, autoimmunity, and cancer from the paratope networks of adaptive immune receptors. Briefings in bioinformatics 25 (5) (2024)
Zichang Xu, Hendra S Ismanto, Dianita S Saputri, Soichiro Haruna, Guanqun Sun, Jan Wilamowski, Shunsuke Teraguchi, Ayan Sengupta, Songling Li, Daron M Standley
Robust detection of infectious disease, autoimmunity, and cancer from the paratope networks of adaptive immune receptors. Briefings in bioinformatics 25 (5) (2024)
Shuhei Sakakibara, Yu-Chen Liu, Masakazu Ishikawa, Ryuya Edahiro, Yuya Shirai, Soichiro Haruna, Marwa Ali El Hussien, Zichang Xu, Songling Li, Yuta Yamaguchi, Teruaki Murakami, Takayoshi Morita, Yasuhiro Kato, Haruhiko Hirata, Yoshito Takeda, Fuminori Sugihara, Yoko Naito, Daisuke Motooka, Chao-Yuan Tsai, Chikako Ono, Yoshiharu Matsuura, James Badger Wing, Hisatake Matsumoto, Hiroshi Ogura, Masato Okada, Atsushi Kumanogoh, Yukinari Okada, Daron M Standley, Hitoshi Kikutani, Daisuke Okuzaki
Clonal landscape of autoantibody-secreting plasmablasts in COVID-19 patients. Life science alliance 7 (12) (2024)
Taiichiro Shirai, Akiko Nakai, Emiko Ando, Jun Fujimoto, Sarah Leach, Takao Arimori, Daisuke Higo, Floris J van Eerden, Janyerkye Tulyeu, Yu-Chen Liu, Daisuke Okuzaki, Masanori A Murayama, Haruhiko Miyata, Kazuto Nunomura, Bangzhong Lin, Akiyoshi Tani, Atsushi Kumanogoh, Masahito Ikawa, James Badger Wing, Daron M Standley, Junichi Takagi, Kazuhiro Suzuki
Celastrol suppresses humoral immune responses and autoimmunity by targeting the COMMD3/8 complex. Science immunology 8 (81) (2023)
Taiichiro Shirai, Akiko Nakai, Emiko Ando, Jun Fujimoto, Sarah Leach, Takao Arimori, Daisuke Higo, Floris J van Eerden, Janyerkye Tulyeu, Yu-Chen Liu, Daisuke Okuzaki, Masanori A Murayama, Haruhiko Miyata, Kazuto Nunomura, Bangzhong Lin, Akiyoshi Tani, Atsushi Kumanogoh, Masahito Ikawa, James Badger Wing, Daron M Standley, Junichi Takagi, Kazuhiro Suzuki
Celastrol suppresses humoral immune responses and autoimmunity by targeting the COMMD3/8 complex. Science immunology 8 (81) (2023)
Arthur Millius, Rikuhiro G Yamada, Hiroshi Fujishima, Kazuhiko Maeda, Daron M Standley, Kenta Sumiyama, Dimitri Perrin, Hiroki R Ueda
Circadian ribosome profiling reveals a role for the Period2 upstream open reading frame in sleep. Proceedings of the National Academy of Sciences of the United States of America 120 (40) (2023)
Zichang Xu, Ana Davila, Jan Wilamowski, Shunsuke Teraguchi, Daron M Standley
Improved Antibody-Specific Epitope Prediction Using AlphaFold and AbAdapt. Chembiochem : a European journal of chemical biology 23 (18) (2022)
Ana Davila, Zichang Xu, Songling Li, John Rozewicki, Jan Wilamowski, Sergei Kotelnikov, Dima Kozakov, Shunsuke Teraguchi, Daron M Standley
AbAdapt: an adaptive approach to predicting antibody-antigen complex structures from sequence. Bioinformatics advances 2 (1) (2022)
Yee Kien Chong, Sarang Tartey, Yuki Yoshikawa, Koshi Imami, Songling Li, Masanori Yoshinaga, Ai Hirabayashi, Guohao Liu, Alexis Vandenbon, Fabian Hia, Takuya Uehata, Takashi Mino, Yutaka Suzuki, Takeshi Noda, Dominique Ferrandon, Daron M Standley, Yasushi Ishihama, Osamu Takeuchi
Cyclin J-CDK complexes limit innate immune responses by reducing proinflammatory changes in macrophage metabolism. Science signaling 15 (729) (2022)
Ana Davila, Zichang Xu, Songling Li, John Rozewicki, Jan Wilamowski, Sergei Kotelnikov, Dima Kozakov, Shunsuke Teraguchi, Daron M Standley
AbAdapt: an adaptive approach to predicting antibody-antigen complex structures from sequence. Bioinformatics advances 2 (1) (2022)
Nariko Ikemura, Shunta Taminishi, Tohru Inaba, Takao Arimori, Daisuke Motooka, Kazutaka Katoh, Yuhei Kirita, Yusuke Higuchi, Songling Li, Tatsuya Suzuki, Yumi Itoh, Yuki Ozaki, Shota Nakamura, Satoaki Matoba, Daron M Standley, Toru Okamoto, Junichi Takagi, Atsushi Hoshino
An engineered ACE2 decoy neutralizes the SARS-CoV-2 Omicron variant and confers protection against infection in vivo. Science translational medicine 14 (650) (2022)
Atsushi Tanaka, Shinji Maeda, Takashi Nomura, Mara Anais Llamas-Covarrubias, Satoshi Tanaka, Lin Jin, Ee Lyn Lim, Hiromasa Morikawa, Yohko Kitagawa, Shuji Akizuki, Yoshinaga Ito, Chihiro Fujimori, Keiji Hirota, Tosei Murase, Motomu Hashimoto, Junichi Higo, Rose Zamoyska, Ryuzo Ueda, Daron M Standley, Noriko Sakaguchi, Shimon Sakaguchi
Construction of a T cell receptor signaling range for spontaneous development of autoimmune disease. The Journal of experimental medicine 220 (2) (2022)
Martin Loza, Shunsuke Teraguchi, Daron M Standley, Diego Diez
Unbiased integration of single cell transcriptome replicates. NAR genomics and bioinformatics 4 (1) (2022)
Yumiko Saijo-Hamano, Aalaa Alrahman Sherif, Ariel Pradipta, Miwa Sasai, Naoki Sakai, Yoshiaki Sakihama, Masahiro Yamamoto, Daron M Standley, Ryo Nitta
Structural basis of membrane recognition of Toxoplasma gondii vacuole by Irgb6. Life science alliance 5 (1) (2021)
Hozaifa Metwally, Toshio Tanaka, Songling Li, Gyanu Parajuli, Sujin Kang, Hanieh Hamza, Shigeru Hashimoto, Jaya Prakash Chalise, Yohannes Gemechu, Daron M Standley, Tadamitsu Kishimoto
Noncanonical STAT1 phosphorylation expands its transcriptional activity into promoting LPS-induced IL-6 and IL-12p40 production. Science signaling 13 (624) (2020)
Afifa Ayu Koesoema, Daron M Standley, Toshiya Senda, Tomoko Matsuda
Impact and relevance of alcohol dehydrogenase enantioselectivities on biotechnological applications. Applied microbiology and biotechnology 104 (7) (2020)
Afifa Ayu Koesoema, Yosuke Sugiyama, Zichang Xu, Daron M Standley, Miki Senda, Toshiya Senda, Tomoko Matsuda
Structural basis for a highly (S)-enantioselective reductase towards aliphatic ketones with only one carbon difference between side chain. Applied microbiology and biotechnology 103 (23-24) (2019)
Afifa Ayu Koesoema, Yosuke Sugiyama, Kotchakorn T Sriwong, Zichang Xu, Samantha Verina, Daron M Standley, Miki Senda, Toshiya Senda, Tomoko Matsuda
Reversible control of enantioselectivity by the length of ketone substituent in biocatalytic reduction. Applied microbiology and biotechnology 103 (23-24) (2019)

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Publication Activity (10 Years)

Top Topics

Top Venues

Daron M Standley