Erik Lindahl

Scopus Author ID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 39

Top Venues

eLife

Nature communications

bioRxiv : the preprint server for biology

The journal of physical chemistry. B

Stockholms Universitet

Kungliga Tekniska Hogskolan (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Stockholms Universitet Apr 01 2010

Sweden

Professor :: Biochemistry & biophysics

Stockholms Universitet Sep 01 2004

Sweden

Assistant professor :: Biochemistry & biophysics

Kungliga Tekniska Hogskolan Oct 01 2010 - Dec 31 2017

Sweden

Professor :: Theoretical & computational biophysics

Stockholms Universitet Sep 01 2008 - Mar 31 2010

Sweden

Associate professor :: Biochemistry & biophysics

Institut Pasteur Jan 01 2004 - Aug 31 2004

France

Visiting scientist :: Structural biology

Stanford University School of Medicine Jan 01 2002 - Jan 01 2004

United States

Postdoctoral scholar :: Structural biology

Rijksuniversiteit Groningen Jun 01 2001 - Dec 31 2001

Netherlands

Postdoctoral scholar :: Biophysical Chemistry

Education History

Kungliga Tekniska Hogskolan Jul 01 1996 - Jun 26 2001

Sweden

PHD :: Theoretical Physics

Lunds Universitet Tekniska Högskola Sep 01 1991 - Dec 17 1995

Sweden

MSC

Publications

Xiaolong Gao, Han-I Yeh, Zhengrong Yang, Chen Fan, Fan Jiang, Rebecca J Howard, Erik Lindahl, John C Kappes, Tzyh-Chang Hwang
Allosteric inhibition of CFTR gating by CFTRinh-172 binding in the pore. Nature communications 15 (1) (2024)
Magnus Lundborg, Christian Wennberg, Erik Lindahl, Lars Norlén
Simulating the Skin Permeation Process of Ionizable Molecules. Journal of chemical information and modeling 64 (13) (2024)
Magnus Lundborg, Christian Wennberg, Erik Lindahl, Lars Norlén
Simulating the Skin Permeation Process of Ionizable Molecules. Journal of chemical information and modeling (2024)
Xiaolong Gao, Han-I Yeh, Zhengrong Yang, Chen Fan, Fan Jiang, Rebecca J Howard, Erik Lindahl, John C Kappes, Tzyh-Chang Hwang
Allosteric inhibition of CFTR gating by CFTRinh-172 binding in the pore. Nature communications 15 (1) (2024)
Xiaolong Gao, Han-I Yeh, Zhengrong Yang, Chen Fan, Fan Jiang, Rebecca J Howard, Erik Lindahl, John C Kappes, Tzyh-Chang Hwang
Allosteric inhibition of CFTR gating by CFTRinh-172 binding in the pore. Nature communications 15 (1) (2024)
Cathrine Bergh, Urška Rovšnik, Rebecca Howard, Erik Lindahl
Discovery of lipid binding sites in a ligand-gated ion channel by integrating simulations and cryo-EM. eLife 12 (2024)
Magnus Lundborg, Christian Wennberg, Erik Lindahl, Lars Norlén
Simulating the Skin Permeation Process of Ionizable Molecules. Journal of chemical information and modeling 64 (13) (2024)
Farzaneh Jalalypour, Rebecca J Howard, Erik Lindahl
Allosteric Cholesterol Site in Glycine Receptors Characterized through Molecular Simulations. The journal of physical chemistry. B (2024)
Cathrine Bergh, Urška Rovšnik, Rebecca Howard, Erik Lindahl
Discovery of lipid binding sites in a ligand-gated ion channel by integrating simulations and cryo-EM. eLife 12 (2024)
Johanna K S Tiemann, Magdalena Szczuka, Lisa Bouarroudj, Mohamed Oussaren, Steven Garcia, Rebecca J Howard, Lucie Delemotte, Erik Lindahl, Marc Baaden, Kresten Lindorff-Larsen, Matthieu Chavent, Pierre Poulain
MDverse, shedding light on the dark matter of molecular dynamics simulations. eLife 12 (2024)
Farzaneh Jalalypour, Rebecca J Howard, Erik Lindahl
Allosteric Cholesterol Site in Glycine Receptors Characterized through Molecular Simulations. The journal of physical chemistry. B 128 (20) (2024)
Xiaodi Yu, Rosalie E Matico, Robyn Miller, Dhruv Chauhan, Bertrand Van Schoubroeck, Karolien Grauwen, Javier Suarez, Beth Pietrak, Nandan Haloi, Yanting Yin, Gary John Tresadern, Laura Perez-Benito, Erik Lindahl, Astrid Bottelbergs, Daniel Oehlrich, Nina Van Opdenbosch, Sujata Sharma
Structural basis for the oligomerization-facilitated NLRP3 activation. Nature communications 15 (1) (2024)
Xiaodi Yu, Rosalie E Matico, Robyn Miller, Dhruv Chauhan, Bertrand Van Schoubroeck, Karolien Grauwen, Javier Suarez, Beth Pietrak, Nandan Haloi, Yanting Yin, Gary John Tresadern, Laura Perez-Benito, Erik Lindahl, Astrid Bottelbergs, Daniel Oehlrich, Nina Van Opdenbosch, Sujata Sharma
Structural basis for the oligomerization-facilitated NLRP3 activation. Nature communications 15 (1) (2024)
Farzaneh Jalalypour, Rebecca J Howard, Erik Lindahl
Allosteric Cholesterol Site in Glycine Receptors Characterized through Molecular Simulations. The journal of physical chemistry. B 128 (20) (2024)
Magnus Lundborg, Christian Wennberg, Erik Lindahl, Lars Norlén
Simulating the Skin Permeation Process of Ionizable Molecules. Journal of chemical information and modeling 64 (13) (2024)
Xiaodi Yu, Rosalie E Matico, Robyn Miller, Dhruv Chauhan, Bertrand Van Schoubroeck, Karolien Grauwen, Javier Suarez, Beth Pietrak, Nandan Haloi, Yanting Yin, Gary John Tresadern, Laura Perez-Benito, Erik Lindahl, Astrid Bottelbergs, Daniel Oehlrich, Nina Van Opdenbosch, Sujata Sharma
Structural basis for the oligomerization-facilitated NLRP3 activation. Nature communications 15 (1) (2024)
Cathrine Bergh, Urška Rovšnik, Rebecca Howard, Erik Lindahl
Discovery of lipid binding sites in a ligand-gated ion channel by integrating simulations and cryo-EM. eLife 12 (2024)
Cathrine Bergh, Urška Rovšnik, Rebecca Howard, Erik Lindahl
Discovery of lipid binding sites in a ligand-gated ion channel by integrating simulations and cryo-EM. eLife 12 (2024)
Farzaneh Jalalypour, Rebecca J Howard, Erik Lindahl
Allosteric Cholesterol Site in Glycine Receptors Characterized through Molecular Simulations. The journal of physical chemistry. B 128 (20) (2024)
Nandan Haloi, Shan Huang, Aaron L Nichols, Eve J Fine, Christopher B Marotta, Dennis A Dougherty, Erik Lindahl, Rebecca J Howard, Stephen L Mayo, Henry A Lester
Interactive computational and experimental approaches improve the sensitivity of periplasmic binding protein-based nicotine biosensors for measurements in biofluids. bioRxiv : the preprint server for biology (2023)
Johanna K S Tiemann, Magdalena Szczuka, Lisa Bouarroudj, Mohamed Oussaren, Steven Garcia, Rebecca J Howard, Lucie Delemotte, Erik Lindahl, Marc Baaden, Kresten Lindorff-Larsen, Matthieu Chavent, Pierre Poulain
MDverse: Shedding Light on the Dark Matter of Molecular Dynamics Simulations. bioRxiv : the preprint server for biology (2023)
Nandan Haloi, Shan Huang, Aaron L Nichols, Eve J Fine, Christopher B Marotta, Dennis A Dougherty, Erik Lindahl, Rebecca J Howard, Stephen L Mayo, Henry A Lester
Interactive computational and experimental approaches improve the sensitivity of periplasmic binding protein-based nicotine biosensors for measurements in biofluids. bioRxiv : the preprint server for biology (2023)
Dagimhiwat H Legesse, Chen Fan, Jinfeng Teng, Yuxuan Zhuang, Rebecca J Howard, Colleen M Noviello, Erik Lindahl, Ryan E Hibbs
Structural insights into opposing actions of neurosteroids on GABA A receptors. Nature communications 14 (1) (2023)
Christian Blau, Linnea Yvonnesdotter, Erik Lindahl
Gentle and fast all-atom model refinement to cryo-EM densities via a maximum likelihood approach. PLoS computational biology 19 (7) (2023)
Johanna K S Tiemann, Magdalena Szczuka, Lisa Bouarroudj, Mohamed Oussaren, Steven Garcia, Rebecca J Howard, Lucie Delemotte, Erik Lindahl, Marc Baaden, Kresten Lindorff-Larsen, Matthieu Chavent, Pierre Poulain
MDverse: Shedding Light on the Dark Matter of Molecular Dynamics Simulations. bioRxiv : the preprint server for biology (2023)
Marie Lycksell, Urška Rovšnik, Anton Hanke, Anne Martel, Rebecca J Howard, Erik Lindahl
Biophysical characterization of calcium-binding and modulatory-domain dynamics in a pentameric ligand-gated ion channel. Proceedings of the National Academy of Sciences of the United States of America 119 (50) (2022)
Yuxuan Zhuang, Colleen M Noviello, Ryan E Hibbs, Rebecca J Howard, Erik Lindahl
Differential interactions of resting, activated, and desensitized states of the α7 nicotinic acetylcholine receptor with lipidic modulators. Proceedings of the National Academy of Sciences of the United States of America 119 (43) (2022)
Shaotong Zhu, Akshay Sridhar, Jinfeng Teng, Rebecca J Howard, Erik Lindahl, Ryan E Hibbs
Structural and dynamic mechanisms of GABA A receptor modulators with opposing activities. Nature communications 13 (1) (2022)
Nina M van Sorge, Daniel A Bonsor, Liwen Deng, Erik Lindahl, Verena Schmitt, Mykola Lyndin, Alexej Schmidt, Olof R Nilsson, Jaime Brizuela, Elena Boero, Eric John Sundberg, Jos A G van Strijp, Kelly S Doran, Bernhard B Singer, Gunnar Lindahl, Alex J McCarthy
Bacterial protein domains with a novel Ig-like fold target human CEACAM receptors. The EMBO journal 40 (7) (2021)
Urška Rovšnik, Yuxuan Zhuang, Björn O Forsberg, Marta Carroni, Linnea Yvonnesdotter, Rebecca J Howard, Erik Lindahl
Dynamic closed states of a ligand-gated ion channel captured by cryo-EM and simulations. Life science alliance 4 (8) (2021)
Cathrine Bergh, Stephanie Andrea Heusser, Rebecca Howard, Erik Lindahl
Markov state models of proton- and pore-dependent activation in a pentameric ligand-gated ion channel. eLife 10 (2021)
Szilárd Páll, Artem Zhmurov, Paul Bauer, Mark Abraham, Magnus Lundborg, Alan Gray, Berk Hess, Erik Lindahl
Heterogeneous parallelization and acceleration of molecular dynamics simulations in GROMACS. The Journal of chemical physics 153 (13) (2020)
Kaituo Wang, Sarah Spruce Preisler, Liying Zhang, Yanxiang Cui, Julie Winkel Missel, Christina Grønberg, Kamil Gotfryd, Erik Lindahl, Magnus Andersson, Kirstine Calloe, Pascal F Egea, Dan Arne Klaerke, Michael Pusch, Per Amstrup Pedersen, Z Hong Zhou, Pontus Emanuel Gourdon
Structure of the human ClC-1 chloride channel. PLoS biology 17 (4) (2019)
Arne Elofsson, Berk Hess, Erik Lindahl, Alexey V Onufriev, David van der Spoel, Anders Wallqvist
Ten simple rules on how to create open access and reproducible molecular simulations of biological systems. PLoS computational biology 15 (1) (2019)
Takanori Nakane, Dari Kimanius, Erik Lindahl, Sjors H W Scheres
Characterisation of molecular motions in cryo-EM single-particle data by multi-body refinement in RELION. eLife 7 (2018)
Jasenko Zivanov, Takanori Nakane, Björn O Forsberg, Dari Kimanius, Wim J H Hagen, Erik Lindahl, Sjors H W Scheres
New tools for automated high-resolution cryo-EM structure determination in RELION-3. eLife 7 (2018)
Nina E Ottosson, Malin Silverå Ejneby, Xiongyu Wu, Samira Yazdi, Peter Konradsson, Erik Lindahl, Fredrik Elinder
A drug pocket at the lipid bilayer-potassium channel interface. Science advances 3 (10) (2017)
Stephanie Andrea Heusser, Özge Yoluk, Göran Klement, Erika A Riederer, Erik Lindahl, Rebecca J Howard
Functional characterization of neurotransmitter activation and modulation in a nematode model ligand-gated ion channel. Journal of neurochemistry 138 (2) (2016)
Dari Kimanius, Björn O Forsberg, Sjors H W Scheres, Erik Lindahl
Accelerated cryo-EM structure determination with parallelisation using GPUs in RELION-2. eLife 5 (2016)

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Publication Activity (10 Years)

Top Topics

Top Venues

Erik Lindahl