Gaudenz Karl Danuser (Gaudenz Danuser)

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 54

Top Topics

Top Venues

bioRxiv : the preprint server for biology

PLoS computational biology

Journal of cell science

This page only lists publications with an associated author ORCID identifier.

Publications

Thomas C A Blake, Helen M Fox, Vasja Urbančič, Roshan Ravishankar, Adam Wolowczyk, Edward S Allgeyer, Julia Mason, Gaudenz Karl Danuser, Jennifer L Gallop
Filopodial protrusion driven by density-dependent Ena-TOCA-1 interactions. Journal of cell science 137 (6) (2024)
Felix Yuran Zhou, Clarence Yapp, Zhiguo Shang, Stephan Daetwyler, Zach Marin, Md Torikul Islam, Benjamin A Nanes, Edward Jenkins, Gabriel M Gihana, Bo-Jui Chang, Andrew Weems, Michael L Dustin, Sean J Morrison, Reto Paul Fiolka, Kevin M Dean, Andrew Jamieson, Peter Karl Sorger, Gaudenz Karl Danuser
A general algorithm for consensus 3D cell segmentation from 2D segmented stacks. bioRxiv : the preprint server for biology (2024)
Felix Yuran Zhou, Clarence Yapp, Zhiguo Shang, Stephan Daetwyler, Zach Marin, Md Torikul Islam, Benjamin A Nanes, Edward Jenkins, Gabriel M Gihana, Bo-Jui Chang, Andrew Weems, Michael L Dustin, Sean J Morrison, Reto Paul Fiolka, Kevin M Dean, Andrew Jamieson, Peter Karl Sorger, Gaudenz Karl Danuser
A general algorithm for consensus 3D cell segmentation from 2D segmented stacks. bioRxiv : the preprint server for biology (2024)
Thomas C A Blake, Helen M Fox, Vasja Urbančič, Roshan Ravishankar, Adam Wolowczyk, Edward S Allgeyer, Julia Mason, Gaudenz Karl Danuser, Jennifer L Gallop
Filopodial protrusion driven by density-dependent Ena-TOCA-1 interactions. Journal of cell science 137 (6) (2024)
Thomas C A Blake, Helen M Fox, Vasja Urbančič, Roshan Ravishankar, Adam Wolowczyk, Edward S Allgeyer, Julia Mason, Gaudenz Karl Danuser, Jennifer L Gallop
Filopodial protrusion driven by density-dependent Ena-TOCA-1 interactions. Journal of cell science (2024)
Robert J Ju, Alistair D Falconer, Christanny J Schmidt, Marco A Enriquez Martinez, Kevin M Dean, Reto P Fiolka, David P Sester, Max Nobis, Paul Timpson, Alexis J Lomakin, Gaudenz Karl Danuser, Melanie D White, Nikolas K Haass, Dietmar B Oelz, Samantha J Stehbens
Compression-dependent microtubule reinforcement enables cells to navigate confined environments. Nature cell biology (2024)
Felix Yuran Zhou, Clarence Yapp, Zhiguo Shang, Stephan Daetwyler, Zach Marin, Md Torikul Islam, Benjamin A Nanes, Edward Jenkins, Gabriel M Gihana, Bo-Jui Chang, Andrew Weems, Michael L Dustin, Sean J Morrison, Reto Paul Fiolka, Kevin M Dean, Andrew Jamieson, Peter Karl Sorger, Gaudenz Karl Danuser
A general algorithm for consensus 3D cell segmentation from 2D segmented stacks. bioRxiv : the preprint server for biology (2024)
Vasanth Siruvallur Murali, Divya Rajendran, Tadamoto Isogai, Ralph J DeBerardinis, Gaudenz Karl Danuser
RhoA activation promotes glucose uptake to elevate proliferation in MAPK inhibitor resistant melanoma cells. bioRxiv : the preprint server for biology (2024)
Robert J Ju, Alistair D Falconer, Christanny J Schmidt, Marco A Enriquez Martinez, Kevin M Dean, Reto P Fiolka, David P Sester, Max Nobis, Paul Timpson, Alexis J Lomakin, Gaudenz Karl Danuser, Melanie D White, Nikolas K Haass, Dietmar B Oelz, Samantha J Stehbens
Compression-dependent microtubule reinforcement enables cells to navigate confined environments. Nature cell biology (2024)
Vasanth Siruvallur Murali, Divya Rajendran, Tadamoto Isogai, Ralph J DeBerardinis, Gaudenz Karl Danuser
RhoA activation promotes glucose uptake to elevate proliferation in MAPK inhibitor resistant melanoma cells. bioRxiv : the preprint server for biology (2024)
Thomas C A Blake, Helen M Fox, Vasja Urbančič, Roshan Ravishankar, Adam Wolowczyk, Edward S Allgeyer, Julia Mason, Gaudenz Karl Danuser, Jennifer L Gallop
Filopodial protrusion driven by density-dependent Ena-TOCA-1 interactions. Journal of cell science 137 (6) (2024)
Thomas C A Blake, Helen M Fox, Vasja Urbančič, Roshan Ravishankar, Adam Wolowczyk, Edward S Allgeyer, Julia Mason, Gaudenz Karl Danuser, Jennifer L Gallop
Filopodial protrusion driven by density-dependent Ena-TOCA-1 interactions. Journal of cell science 137 (6) (2024)
Thomas C A Blake, Helen M Fox, Vasja Urbančič, Roshan Ravishankar, Adam Wolowczyk, Edward S Allgeyer, Julia Mason, Gaudenz Karl Danuser, Jennifer L Gallop
Filopodial protrusion driven by density-dependent Ena-TOCA-1 interactions. Journal of cell science 137 (6) (2024)
Holly Merta, Tadamoto Isogai, Blessy Paul, Gaudenz Karl Danuser, W Mike Henne
Spatial proteomics of ER tubules reveals CLMN, an ER-actin tether at focal adhesions that promotes cell migration. bioRxiv : the preprint server for biology (2024)
Holly Merta, Tadamoto Isogai, Blessy Paul, Gaudenz Karl Danuser, W Mike Henne
Spatial proteomics of ER tubules reveals CLMN, an ER-actin tether at focal adhesions that promotes cell migration. bioRxiv : the preprint server for biology (2024)
Tadamoto Isogai, Vasanth Siruvallur Murali, Felix Zhou, Xinxin Wang, Divya Rajendran, Lizbeth Perez-Castro, Niranjan Venkateswaran, Maralice Conacci-Sorrell, Gaudenz Karl Danuser
Anchorage-independent cell proliferation promoted by fascin's F-actin bundling. bioRxiv : the preprint server for biology (2024)
Hanieh Mazloom-Farsibaf, Qiongjing Zou, Rebecca Hsieh, Gaudenz Karl Danuser, Meghan K Driscoll
Cellular harmonics for the morphology-invariant analysis of molecular organization at the cell surface. Nature computational science 3 (9) (2023)
Andrew D Weems, Erik S Welf, Meghan K Driscoll, Felix Y Zhou, Hanieh Mazloom-Farsibaf, Bo-Jui Chang, Vasanth Siruvallur Murali, Gabriel M Gihana, Byron G Weiss, Joseph Chi, Divya Rajendran, Kevin M Dean, Reto Fiolka, Gaudenz Karl Danuser
Blebs promote cell survival by assembling oncogenic signalling hubs. Nature 615 (7952) (2023)
Benjamin A Nanes, Kushal Bhatt, Evgenia V Azarova, Divya Rajendran, Tadamoto Isogai, Kevin M Dean, Gaudenz Karl Danuser
Keratin isoform shifts modulate motility signals during wound healing. bioRxiv : the preprint server for biology (2023)
Clarence Yapp, Ajit J Nirmal, Felix Yuran Zhou, Zoltan Maliga, Paula Montero Llopis, George F Murphy, Christine G Lian, Gaudenz Karl Danuser, Sandro Santagata, Peter Karl Sorger, null null
Multiplexed 3D Analysis of Cell Plasticity and Immune Niches in Melanoma. bioRxiv : the preprint server for biology (2023)
Hanieh Mazloom-Farsibaf, Qiongjing Zou, Rebecca Hsieh, Gaudenz Karl Danuser, Meghan K Driscoll
Cellular harmonics for the morphology-invariant analysis of molecular organization at the cell surface. Nature computational science 3 (9) (2023)
Felix Yuran Zhou, Andrew Weems, Gabriel M Gihana, Bingying Chen, Bo-Jui Chang, Meghan Driscoll, Gaudenz Karl Danuser
Surface-guided computing to analyze subcellular morphology and membrane-associated signals in 3D. bioRxiv : the preprint server for biology (2023)
Hanieh Mazloom-Farsibaf, Qiongjing Zou, Rebecca Hsieh, Gaudenz Karl Danuser, Meghan K Driscoll
Cellular harmonics for the morphology-invariant analysis of molecular organization at the cell surface. Nature computational science 3 (9) (2023)
Benjamin A Nanes, Kushal Bhatt, Evgenia V Azarova, Divya Rajendran, Tadamoto Isogai, Kevin M Dean, Gaudenz Karl Danuser
Keratin isoform shifts modulate motility signals during wound healing. bioRxiv : the preprint server for biology (2023)
Xinxin Wang, Yueping Li, Ailing Liu, Ronnin Padilla, Donghoon M Lee, Daehwan Kim, Marcel Mettlen, Zhiming Chen, Sandra L Schmid, Gaudenz Karl Danuser
Endocytosis gated by emergent properties of membrane-clathrin interactions. bioRxiv : the preprint server for biology (2023)
Andrew D Weems, Erik S Welf, Meghan K Driscoll, Felix Y Zhou, Hanieh Mazloom-Farsibaf, Bo-Jui Chang, Vasanth Siruvallur Murali, Gabriel M Gihana, Byron G Weiss, Joseph Chi, Divya Rajendran, Kevin M Dean, Reto Fiolka, Gaudenz Karl Danuser
Blebs promote cell survival by assembling oncogenic signalling hubs. Nature (2023)
Felix Yuran Zhou, Andrew Weems, Gabriel M Gihana, Bingying Chen, Bo-Jui Chang, Meghan Driscoll, Gaudenz Karl Danuser
Surface-guided computing to analyze subcellular morphology and membrane-associated signals in 3D. bioRxiv : the preprint server for biology (2023)
Andrew D Weems, Erik S Welf, Meghan K Driscoll, Felix Y Zhou, Hanieh Mazloom-Farsibaf, Bo-Jui Chang, Vasanth Siruvallur Murali, Gabriel M Gihana, Byron G Weiss, Joseph Chi, Divya Rajendran, Kevin M Dean, Reto Fiolka, Gaudenz Karl Danuser
Blebs promote cell survival by assembling oncogenic signalling hubs. Nature 615 (7952) (2023)
Hanieh Mazloom-Farsibaf, Qiongjing Zou, Rebecca Hsieh, Gaudenz Karl Danuser, Meghan K Driscoll
Cellular harmonics for the morphology-invariant analysis of molecular organization at the cell surface. Nature computational science 3 (9) (2023)
Hanieh Mazloom-Farsibaf, Qiongjing Zou, Rebecca Hsieh, Gaudenz Karl Danuser, Meghan K Driscoll
Cellular harmonics for the morphology-invariant analysis of molecular organization at the cell surface. Nature computational science 3 (9) (2023)
Andrew D Weems, Erik S Welf, Meghan K Driscoll, Felix Y Zhou, Hanieh Mazloom-Farsibaf, Bo-Jui Chang, Vasanth Siruvallur Murali, Gabriel M Gihana, Byron G Weiss, Joseph Chi, Divya Rajendran, Kevin M Dean, Reto Fiolka, Gaudenz Karl Danuser
Blebs promote cell survival by assembling oncogenic signalling hubs. Nature 615 (7952) (2023)
Andrew D Weems, Erik S Welf, Meghan K Driscoll, Felix Y Zhou, Hanieh Mazloom-Farsibaf, Bo-Jui Chang, Vasanth Siruvallur Murali, Gabriel M Gihana, Byron G Weiss, Joseph Chi, Divya Rajendran, Kevin M Dean, Reto Fiolka, Gaudenz Karl Danuser
Blebs promote cell survival by assembling oncogenic signalling hubs. Nature (2023)
Andrew D Weems, Erik S Welf, Meghan K Driscoll, Felix Y Zhou, Hanieh Mazloom-Farsibaf, Bo-Jui Chang, Vasanth Siruvallur Murali, Gabriel M Gihana, Byron G Weiss, Joseph Chi, Divya Rajendran, Kevin M Dean, Reto Fiolka, Gaudenz Karl Danuser
Blebs promote cell survival by assembling oncogenic signalling hubs. Nature (2023)
Xuexia Jiang, Tadamoto Isogai, Joseph Chi, Gaudenz Karl Danuser
Fine-grained, nonlinear registration of live cell movies reveals spatiotemporal organization of diffuse molecular processes. PLoS computational biology 18 (12) (2022)
Xuexia Jiang, Tadamoto Isogai, Joseph Chi, Gaudenz Karl Danuser
Fine-grained, nonlinear registration of live cell movies reveals spatiotemporal organization of diffuse molecular processes. PLoS computational biology 18 (12) (2022)
Lizbeth Perez-Castro, Niranjan Venkateswaran, Roy Garcia, Yi-Heng Hao, M C Lafita-Navarro, Jiwoong Kim, Dagan Segal, Etai Saponzik, Bo-Jui Chang, Reto Fiolka, Gaudenz Karl Danuser, Lin Xu, Thomas Brabletz, Maralice Conacci-Sorrell
The AHR target gene scinderin activates the WNT pathway by facilitating the nuclear translocation of β-catenin. Journal of cell science 135 (20) (2022)
Xinxin Wang, Gaudenz Karl Danuser
Remeshing flexible membranes under the control of free energy. PLoS computational biology 18 (12) (2022)
Xuexia Jiang, Tadamoto Isogai, Joseph Chi, Gaudenz Karl Danuser
Fine-grained, nonlinear registration of live cell movies reveals spatiotemporal organization of diffuse molecular processes. PLoS computational biology 18 (12) (2022)
Xuexia Jiang, Tadamoto Isogai, Joseph Chi, Gaudenz Karl Danuser
Fine-grained, nonlinear registration of live cell movies reveals spatiotemporal organization of diffuse molecular processes. PLoS computational biology 18 (12) (2022)
Dagan Segal, Hanieh Mazloom-Farsibaf, Bo-Jui Chang, Philippe Roudot, Divya Rajendran, Stephan Daetwyler, Reto Fiolka, Mikako Warren, James F Amatruda, Gaudenz Karl Danuser
In vivo 3D profiling of site-specific human cancer cell morphotypes in zebrafish. The Journal of cell biology 221 (11) (2022)
Xuexia Jiang, Tadamoto Isogai, Joseph Chi, Gaudenz Karl Danuser
Fine-grained, nonlinear registration of live cell movies reveals spatiotemporal organization of diffuse molecular processes. PLoS computational biology 18 (12) (2022)
Ning Zhang, Yanhui Li, Tsung-Po Lai, Jerry W Shay, Gaudenz Karl Danuser
Imaging assay to probe the role of telomere length shortening on telomere-gene interactions in single cells. Chromosoma 130 (1) (2021)
Sangyoon J Han, Evgenia V Azarova, Austin J Whitewood, Alexia Bachir, Edgar Guttierrez, Alex Groisman, Alan R Horwitz, Benjamin Thomas Goult, Kevin M Dean, Gaudenz Karl Danuser
Pre-complexation of talin and vinculin without tension is required for efficient nascent adhesion maturation. eLife 10 (2021)
Daniel J Marston, Marco Vilela, Jaewon Huh, Jinqi Ren, Mihai L Azoitei, George Glekas, Gaudenz Karl Danuser, John Sondek, Klaus M Hahn
Multiplexed GTPase and GEF biosensor imaging enables network connectivity analysis. Nature chemical biology 16 (8) (2020)
Xinxin Wang, Zhiming Chen, Marcel Mettlen, Jungsik Noh, Sandra L Schmid, Gaudenz Karl Danuser
DASC, a sensitive classifier for measuring discrete early stages in clathrin-mediated endocytosis. eLife 9 (2020)
Madhura Bhave, Rosa E Mino, Xinxin Wang, Jeon Lee, Heather M Grossman, Ashley M Lakoduk, Gaudenz Karl Danuser, Sandra L Schmid, Marcel Mettlen
Functional characterization of 67 endocytic accessory proteins using multiparametric quantitative analysis of CCP dynamics. Proceedings of the National Academy of Sciences of the United States of America 117 (50) (2020)
Meghan K Driscoll, Erik S Welf, Andrew R Jamieson, Kevin M Dean, Tadamoto Isogai, Reto Paul Fiolka, Gaudenz Karl Danuser
Robust and automated detection of subcellular morphological motifs in 3D microscopy images. Nature methods 16 (10) (2019)
Mihai L Azoitei, Jungsik Noh, Daniel J Marston, Philippe Roudot, Christopher B Marshall, Timothy A Daugird, Sidney L Lisanza, María José Sandí, Mitsu Ikura, John Sondek, Robert Rottapel, Klaus M Hahn, Gaudenz Karl Danuser
Spatiotemporal dynamics of GEF-H1 activation controlled by microtubule- and Src-mediated pathways. The Journal of cell biology 218 (9) (2019)
Tonmoy Chakraborty, Meghan K Driscoll, Elise Jeffery, Malea M Murphy, Philippe Roudot, Bo-Jui Chang, Saumya Vora, Wen Mai Wong, Cara D Nielson, Hua Zhang, Vladimir Zhemkov, Chitkale Hiremath, Estanislao Daniel De La Cruz, Yating Yi, Ilya Bezprozvanny, Hu Zhao, Raju Tomer, Rainer Heintzmann, Julian P Meeks, Denise K Marciano, Sean J Morrison, Gaudenz Karl Danuser, Kevin M Dean, Reto Paul Fiolka
Light-sheet microscopy of cleared tissues with isotropic, subcellular resolution. Nature methods 16 (11) (2019)
Ana F David, Philippe Roudot, Wesley R Legant, Eric Betzig, Gaudenz Karl Danuser, Daniel Wolfram Gerlich
Augmin accumulation on long-lived microtubules drives amplification and kinetochore-directed growth. The Journal of cell biology 218 (7) (2019)
Xiao Ma, Onur Dagliyan, Klaus M Hahn, Gaudenz Karl Danuser
Profiling cellular morphodynamics by spatiotemporal spectrum decomposition. PLoS computational biology 14 (8) (2018)
Maria M Bagonis, Ludovico Fusco, Olivier Pertz, Gaudenz Karl Danuser
Automated profiling of growth cone heterogeneity defines relations between morphology and motility. The Journal of cell biology 218 (1) (2018)
Assaf Zaritsky, Uri Obolski, Zhuo Gan, Carlos R Reis, Zuzana Kadlecova, Yi Du, Sandra L Schmid, Gaudenz Karl Danuser
Decoupling global biases and local interactions between cell biological variables. eLife 6 (2017)
Assaf Zaritsky, Yun-Yu Tseng, M Angeles Rabadán, Shefali Krishna, Michael Overholtzer, Gaudenz Karl Danuser, Alan Hall
Diverse roles of guanine nucleotide exchange factors in regulating collective cell migration. The Journal of cell biology 216 (6) (2017)