Jemma L Geoghegan

Scopus Author ID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 37

Top Venues

Virus evolution

Viruses

Archives of virology

Nature communications

University of Otago

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Otago Mar 02 2020

New Zealand

Senior Lecturer :: Microbiology and Immunology

Publications

Stephanie J Waller, Eimear Egan, Shannan Crow, Anthony Charsley, P Mark Lokman, Erica K Williams, Edward C Holmes, Jemma L Geoghegan
Host and geography impact virus diversity in New Zealand's longfin and shortfin eels. Archives of virology 169 (4) (2024)
Stephanie J Waller, Pablo Tortosa, Tertia Thurley, Colin F J O'Donnell, Rebecca Jackson, Gillian Dennis, Rebecca M Grimwood, Edward C Holmes, Kate McInnes, Jemma L Geoghegan
Virome analysis of New Zealand's bats reveals cross-species viral transmission among the Coronaviridae . Virus evolution 10 (1) (2024)
Stephanie J Waller, Eimear Egan, Shannan Crow, Anthony Charsley, P Mark Lokman, Erica K Williams, Edward C Holmes, Jemma L Geoghegan
Host and geography impact virus diversity in New Zealand's longfin and shortfin eels. Archives of virology 169 (4) (2024)
Rebecca M Grimwood, Stephanie J Waller, Janelle R Wierenga, Lauren Lim, Jérémy Dubrulle, Edward C Holmes, Jemma L Geoghegan
Viromes of Antarctic fish resemble the diversity found at lower latitudes. Virus evolution 10 (1) (2024)
Stephanie J Waller, Eimear Egan, Shannan Crow, Anthony Charsley, P Mark Lokman, Erica K Williams, Edward C Holmes, Jemma L Geoghegan
Host and geography impact virus diversity in New Zealand's longfin and shortfin eels. Archives of virology 169 (4) (2024)
Stephanie J Waller, Pablo Tortosa, Tertia Thurley, Colin F J O'Donnell, Rebecca Jackson, Gillian Dennis, Rebecca M Grimwood, Edward C Holmes, Kate McInnes, Jemma L Geoghegan
Virome analysis of New Zealand's bats reveals cross-species viral transmission among the Coronaviridae . Virus evolution 10 (1) (2024)
Rebecca M Grimwood, Stephanie J Waller, Janelle R Wierenga, Lauren Lim, Jérémy Dubrulle, Edward C Holmes, Jemma L Geoghegan
Viromes of Antarctic fish resemble the diversity found at lower latitudes. Virus evolution 10 (1) (2024)
Stephanie J Waller, Eimear Egan, Shannan Crow, Anthony Charsley, P Mark Lokman, Erica K Williams, Edward C Holmes, Jemma L Geoghegan
Host and geography impact virus diversity in New Zealand's longfin and shortfin eels. Archives of virology 169 (4) (2024)
Stephanie J Waller, Pablo Tortosa, Tertia Thurley, Colin F J O'Donnell, Rebecca Jackson, Gillian Dennis, Rebecca M Grimwood, Edward C Holmes, Kate McInnes, Jemma L Geoghegan
Virome analysis of New Zealand's bats reveals cross-species viral transmission among the Coronaviridae . Virus evolution 10 (1) (2024)
Stephanie J Waller, Pablo Tortosa, Tertia Thurley, Colin F J O'Donnell, Rebecca Jackson, Gillian Dennis, Rebecca M Grimwood, Edward C Holmes, Kate McInnes, Jemma L Geoghegan
Virome analysis of New Zealand's bats reveals cross-species viral transmission among the Coronaviridae . Virus evolution 10 (1) (2024)
Stephanie J Waller, Eimear Egan, Shannan Crow, Anthony Charsley, P Mark Lokman, Erica K Williams, Edward C Holmes, Jemma L Geoghegan
Host and geography impact virus diversity in New Zealand's longfin and shortfin eels. Archives of virology 169 (4) (2024)
Stephanie J Waller, Eimear Egan, Shannan Crow, Anthony Charsley, P Mark Lokman, Erica K Williams, Edward C Holmes, Jemma L Geoghegan
Host and geography impact virus diversity in New Zealand's longfin and shortfin eels. Archives of virology 169 (4) (2024)
Stephanie J Waller, Eimear Egan, Shannan Crow, Anthony Charsley, P Mark Lokman, Erica K Williams, Edward C Holmes, Jemma L Geoghegan
Host and geography impact virus diversity in New Zealand's longfin and shortfin eels. Archives of virology 169 (4) (2024)
Vincenzo A Costa, David R Bellwood, Jonathon C O Mifsud, Kate Van Brussel, Jemma L Geoghegan, Edward C Holmes, Erin Harvey
Limited cross-species virus transmission in a spatially restricted coral reef fish community. Virus evolution 9 (1) (2023)
Vincenzo A Costa, David R Bellwood, Jonathon C O Mifsud, Kate Van Brussel, Jemma L Geoghegan, Edward C Holmes, Erin Harvey
Limited cross-species virus transmission in a spatially restricted coral reef fish community. Virus evolution 9 (1) (2023)
Benjamin J Perry, Mitra Mohamadi Darestani, Motia Gulshan Ara, Amélie Hoste, Jennifer M Jandt, Ludovic Dutoit, Edward C Holmes, Travis Ingram, Jemma L Geoghegan
Viromes of Freshwater Fish with Lacustrine and Diadromous Life Histories Differ in Composition. Viruses 14 (2) (2022)
Lauren Jelley, Jordan Douglas, Xiaoyun Ren, David Winter, Andrea McNeill, Q Sue Huang, Nigel P French, David Welch, James Hadfield, Joep de Ligt, Jemma L Geoghegan
Genomic epidemiology of Delta SARS-CoV-2 during transition from elimination to suppression in Aotearoa New Zealand. Nature communications 13 (1) (2022)
Jonathon C O Mifsud, Rachael V Gallagher, Edward C Holmes, Jemma L Geoghegan
Transcriptome Mining Expands Knowledge of RNA Viruses across the Plant Kingdom. Journal of virology (2022)
Jordan Douglas, David Winter, Andrea McNeill, Sam Carr, Michael Bunce, Nigel P French, James Hadfield, Joep de Ligt, David Welch, Jemma L Geoghegan
Tracing the international arrivals of SARS-CoV-2 Omicron variants after Aotearoa New Zealand reopened its border. Nature communications 13 (1) (2022)
Vincenzo A Costa, Jemma L Geoghegan, Edward C Holmes, Erin Harvey
Genetic Reassortment between Endemic and Introduced Macrobrachium rosenbergii Nodaviruses in the Murray-Darling Basin, Australia. Viruses 14 (10) (2022)
Allison K Miller, Jonathon C O Mifsud, Vincenzo A Costa, Rebecca M Grimwood, Jane Kitson, Cindy Baker, Cara L Brosnahan, Anjali Pande, Edward C Holmes, Neil J Gemmell, Jemma L Geoghegan
Slippery when wet: cross-species transmission of divergent coronaviruses in bony and jawless fish and the evolutionary history of the Coronaviridae. Virus evolution 7 (2) (2021)
Vincenzo A Costa, Jonathon C O Mifsud, Dean Gilligan, Jane E Williamson, Edward C Holmes, Jemma L Geoghegan
Metagenomic sequencing reveals a lack of virus exchange between native and invasive freshwater fish across the Murray-Darling Basin, Australia. Virus evolution 7 (1) (2021)
Jemma L Geoghegan, Francesca Di Giallonardo, Michelle Wille, Ayda Susana Ortiz-Baez, Vincenzo A Costa, Timothy M Ghaly, Jonathon C O Mifsud, Olivia M H Turnbull, David R Bellwood, Jane E Williamson, Edward C Holmes
Virome composition in marine fish revealed by meta-transcriptomics. Virus evolution 7 (1) (2021)
Jordan Douglas, Fábio K Mendes, Remco Bouckaert, Dong Xie, Cinthy L Jiménez-Silva, Christiaan Swanepoel, Joep de Ligt, Xiaoyun Ren, Matt Storey, James Hadfield, Colin R Simpson, Jemma L Geoghegan, Alexei J Drummond, David Welch
Phylodynamics reveals the role of human travel and contact tracing in controlling the first wave of COVID-19 in four island nations. Virus evolution 7 (2) (2021)
Jemma L Geoghegan, Francesca Di Giallonardo, Michelle Wille, Ayda Susana Ortiz-Baez, Vincenzo A Costa, Timothy Ghaly, Jonathon C O Mifsud, Olivia M H Turnbull, David R Bellwood, Jane E Williamson, Edward C Holmes
Erratum: Virome composition in marine fish revealed by meta-transcriptomics. Virus evolution 7 (1) (2021)
Michelle Wille, Jemma L Geoghegan, Edward C Holmes
How accurately can we assess zoonotic risk? PLoS biology 19 (4) (2021)
Rebecca M Grimwood, Edward C Holmes, Jemma L Geoghegan
A Novel Rubi-Like Virus in the Pacific Electric Ray (Tetronarce californica) Reveals the Complex Evolutionary History of the Matonaviridae. Viruses 13 (4) (2021)
Joshua S Madin, Daniel Aagren Nielsen, Maria Brbic, Ross Corkrey, David Danko, Kyle Edwards, Martin K M Engqvist, Noah Fierer, Jemma L Geoghegan, Michael R Gillings, Nikos C Kyrpides, Elena Litchman, Christopher E Mason, Lisa R Moore, Søren Laurentius Nielsen, Ian T Paulsen, Nathan D Price, T B K Reddy, Matthew A Richards, Eduardo P C Rocha, Thomas M Schmidt, Heba Shaaban, Maulik Shukla, Fran Supek, Sasha G Tetu, Sara Vieira-Silva, Alice R Wattam, David A Westfall, Mark Westoby
A synthesis of bacterial and archaeal phenotypic trait data. Scientific data 7 (1) (2020)
Rhys H Parry, Michelle Wille, Olivia M H Turnbull, Jemma L Geoghegan, Edward C Holmes
Divergent Influenza-Like Viruses of Amphibians and Fish Support an Ancient Evolutionary Association. Viruses 12 (9) (2020)
Jemma L Geoghegan, Xiaoyun Ren, Matthew Storey, James Hadfield, Lauren Jelley, Sarah Jefferies, Jill Sherwood, Shevaun Paine, Q Sue Huang, Jordan Douglas, Fábio K Mendes, Andrew A Sporle, Michael G Baker, David R Murdoch, Nigel P French, Colin R Simpson, David Welch, Alexei J Drummond, Edward C Holmes, Sebastián Duchêne, Joep de Ligt
Genomic epidemiology reveals transmission patterns and dynamics of SARS-CoV-2 in Aotearoa New Zealand. Nature communications 11 (1) (2020)
Olivia M H Turnbull, Ayda Susana Ortiz-Baez, John-Sebastian Eden, Mang Shi, Jane E Williamson, Troy F Gaston, Yong-Zhen Zhang, Edward C Holmes, Jemma L Geoghegan
Meta-Transcriptomic Identification of Divergent Amnoonviridae in Fish. Viruses 12 (11) (2020)
Sarah J Campbell, Wilbur Ashley, Margarita Gil-Fernandez, Thomas M Newsome, Francesca Di Giallonardo, Ayda Susana Ortiz-Baez, Jackie E Mahar, Alison L Towerton, Michael Gillings, Edward C Holmes, Alexandra J R Carthey, Jemma L Geoghegan
Red fox viromes in urban and rural landscapes. Virus evolution 6 (2) (2020)
Jemma L Geoghegan, Edward C Holmes
Evolutionary Virology at 40. Genetics 210 (4) (2019)
Jemma L Geoghegan, Vanessa Pirotta, Erin Harvey, Alastair Smith, Jan P Buchmann, Martin Ostrowski, John-Sebastian Eden, Robert G Harcourt, Edward C Holmes
Virological Sampling of Inaccessible Wildlife with Drones. Viruses 10 (6) (2018)
Jemma L Geoghegan, Francesca Di Giallonardo, Kate Cousins, Mang Shi, Jane E Williamson, Edward C Holmes
Hidden diversity and evolution of viruses in market fish. Virus evolution 4 (2) (2018)
Jemma L Geoghegan, Aldo F Saavedra, Sebastián Duchêne, Sheena Sullivan, Ian Barr, Edward C Holmes
Continental synchronicity of human influenza virus epidemics despite climatic variation. PLoS pathogens 14 (1) (2018)
Francesca Di Giallonardo, Jen Kok, Marian Fernandez, Ian Carter, Jemma L Geoghegan, Dominic E Dwyer, Edward C Holmes, John-Sebastian Eden
Evolution of Human Respiratory Syncytial Virus (RSV) over Multiple Seasons in New South Wales, Australia. Viruses 10 (9) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Jemma L Geoghegan