Sara Vieira-Silva

ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 24

Top Venues

Nature medicine

Nature microbiology

Nature communications

Nature

This page only lists publications with an associated author ORCID identifier.

Publications

Raul Yhossef Tito Tadeo, Sara Verbandt, Marta Aguirre Vazquez, Leo Lahti, Chloe Verspecht, Verónica Lloréns-Rico, Sara Vieira-Silva, Janine Arts, Gwen Falony, Evelien Dekker, Joke Reumers, Sabine Tejpar, Jeroen Raes
Microbiome confounders and quantitative profiling challenge predicted microbial targets in colorectal cancer development. Nature medicine 30 (5) (2024)
Raul Yhossef Tito Tadeo, Sara Verbandt, Marta Aguirre Vazquez, Leo Lahti, Chloe Verspecht, Verónica Lloréns-Rico, Sara Vieira-Silva, Janine Arts, Gwen Falony, Evelien Dekker, Joke Reumers, Sabine Tejpar, Jeroen Raes
Microbiome confounders and quantitative profiling challenge predicted microbial targets in colorectal cancer development. Nature medicine 30 (5) (2024)
Raul Yhossef Tito Tadeo, Sara Verbandt, Marta Aguirre Vazquez, Leo Lahti, Chloe Verspecht, Verónica Lloréns-Rico, Sara Vieira-Silva, Janine Arts, Gwen Falony, Evelien Dekker, Joke Reumers, Sabine Tejpar, Jeroen Raes
Microbiome confounders and quantitative profiling challenge predicted microbial targets in colorectal cancer development. Nature medicine 30 (5) (2024)
Raul Yhossef Tito Tadeo, Sara Verbandt, Marta Aguirre Vazquez, Leo Lahti, Chloe Verspecht, Verónica Lloréns-Rico, Sara Vieira-Silva, Janine Arts, Gwen Falony, Evelien Dekker, Joke Reumers, Sabine Tejpar, Jeroen Raes
Microbiome confounders and quantitative profiling challenge predicted microbial targets in colorectal cancer development. Nature medicine (2024)
Raul Yhossef Tito Tadeo, Sara Verbandt, Marta Aguirre Vazquez, Leo Lahti, Chloe Verspecht, Verónica Lloréns-Rico, Sara Vieira-Silva, Janine Arts, Gwen Falony, Evelien Dekker, Joke Reumers, Sabine Tejpar, Jeroen Raes
Microbiome confounders and quantitative profiling challenge predicted microbial targets in colorectal cancer development. Nature medicine 30 (5) (2024)
Yong Fan, René Klinkby Støving, Samar Berreira Ibraim, Tuulia Hyötyläinen, Florence Thirion, Tulika Arora, Liwei Lyu, Evelina Stankevič, Tue Haldor Hansen, Pierre Déchelotte, Tim Sinioja, Oddny Ragnarsdottir, Nicolas Pons, Nathalie Galleron, Benoît Quinquis, Florence Levenez, Hugo Roume, Gwen Falony, Sara Vieira-Silva, Jeroen Raes, Loa Clausen, Gry Kjaersdam Telléus, Fredrik Bäckhed, Matej Oresic, S Dusko Ehrlich, Oluf Pedersen
The gut microbiota contributes to the pathogenesis of anorexia nervosa in humans and mice. Nature microbiology (2023)
Petros Andrikopoulos, Judith Aron-Wisnewsky, Rima Chakaroun, Antonis Myridakis, Sofia Kirke Forslund-Startceva, Trine Nielsen, Solia Adriouch, Bridget Holmes, Julien Chilloux, Sara Vieira-Silva, Gwen Falony, Joe-Elie Salem, Fabrizio Andreelli, Eugeni Belda, Julius Kieswich, Kanta Chechi, Francesc Puig-Castellví, Mickael Chevalier, Emmanuelle Le Chatelier, Michael T Olanipekun, Lesley Hoyles, Renato Jc Alves, Gerard Helft, Richard Isnard, Lars Valeur Køber, Luis Pedro Coelho, Christine Rouault, Dominique Gauguier, Jens Peter Gøtze, Edi Prifti, Philippe Froguel, null null, Jean-Daniel Zucker, Fredrik Bäckhed, Henrik Vestergaard, Torben Hansen, Jean-Michel Oppert, Matthias Blüher, Jens Nielsen, Jeroen Raes, Peer Bork, Muhammad M Yaqoob, Michael Stumvoll, Oluf Pedersen, S Dusko Ehrlich, Karine Clément, Marc Emmanuel Dumas
Evidence of a causal and modifiable relationship between kidney function and circulating trimethylamine N-oxide. Nature communications 14 (1) (2023)
Sebastien Fromentin, Sofia Kirke Forslund-Startceva, Kanta Chechi, Judith Aron-Wisnewsky, Rima Chakaroun, Trine Nielsen, Valentina Tremaroli, Boyang Ji, Edi Prifti, Antonis Myridakis, Julien Chilloux, Petros Andrikopoulos, Yong Fan, Michael T Olanipekun, Renato Jc Alves, Solia Adiouch, Noam Bar, Yeela Talmor-Barkan, Eugeni Belda, Robert Caesar, Luis Pedro Coelho, Gwen Falony, Soraya Fellahi, Pilar Galan, Nathalie Galleron, Gerard Helft, Lesley Hoyles, Richard Isnard, Emmanuelle Le Chatelier, Hanna Julienne, Lisa M Olsson, Helle Krogh Pedersen, Nicolas Pons, Benoit Quinquis, Christine Rouault, Hugo Roume, Joe-Elie Salem, Thomas Sebastian Benedikt Schmidt, Sara Vieira-Silva, Peishun Li, Maria Zimmermann-Kogadeeva, Christian Lewinter, Nadja B Sønderskov, Tue Haldor Hansen, Dominique Gauguier, Jens Peter Gøtze, Lars Valeur Køber, Ran Kornowski, Henrik Vestergaard, Torben Hansen, Jean-Daniel Zucker, Serge Hercberg, Ivica Letunic, Fredrik Bäckhed, Jean-Michel Oppert, Jens B Nielsen, Jeroen Raes, Peer Bork, Michael Stumvoll, Eran Segal, Karine Clement, Marc Emmanuel Dumas, Stanislav Dusko Ehrlich, Oluf Pedersen
Microbiome and metabolome features of the cardiometabolic disease spectrum. Nature medicine 28 (2) (2022)
Alexander Kurilshikov, Carolina Medina-Gomez, Rodrigo Bacigalupe, Djawad Radjabzadeh, Jun Wang, Ayse Demirkan, Caroline Ivanne Le Roy, Juan Antonio Raygoza Garay, Casey T Finnicum, Xing-Rong Liu, Daria V Zhernakova, Marc Jan Bonder, Tue Haldor Hansen, Fabian Frost, Malte Christoph Rühlemann, Williams Turpin, Jee-Young Moon, Han-Na Kim, Kreete Lüll, Elad Barkan, Shiraz A Shah, Myriam Fornage, Joanna Szopinska-Tokov, Zachary D Wallen, Dmitrii Borisevich, Lars Agreus, Anna Andreasson, Corinna Bang, Larbi Bedrani, Jordana T Bell, Hans Bisgaard, Michael Boehnke, Dorret I Boomsma, Robert D Burk, Annique A J Claringbould, Kenneth Croitoru, Gareth E Davies, Cornelia M Van Duijn, Liesbeth Duijts, Gwen Falony, Jingyuan Fu, Adriaan van der Graaf, Torben Hansen, Georg Homuth, David A Hughes, Richard G Ijzerman, Matthew A Jackson, Vincent W V Jaddoe, Marie Joossens, Torben Jørgensen, Daniel Keszthelyi, Rob Knight, Markku Laakso, Matthias Laudes, Lenore J Launer, Wolfgang Lieb, Aldons J Lusis, Ad A M Masclee, Henriette A Moll, Zlatan Mujagic, Qi Qibin, Daphna Rothschild, Hocheol Shin, Søren Johannes Sørensen, Claire J Steves, Jonathan Thorsen, Nicholas John Timpson, Raul Yhossef Tito Tadeo, Sara Vieira-Silva, Linus Völker, Henry Völzke, Urmo Võsa, Kaitlin H Wade, Susanna Walter, Kyoko Watanabe, Stefan Weiss, Frank U Weiss, Omer Weissbrod, Harm-Jan Westra, Gonneke Willemsen, Haydeh Payami, Daisy M A E Jonkers, Alejandro Arias Vasquez, Eco J C de Geus, Katie A Meyer, Jessica Lasky-Su, Eran Segal, Elin Org, Cisca Wijmenga, Hyung-Lae Kim, Robert C Kaplan, Timothy D Spector, Andre G Uitterlinden, Fernando Rivadeneira, Andre Franke, Markus M Lerch, Lude Franke, Serena Sanna, Mauro D'Amato, Oluf Pedersen, Andrew D Paterson, Robert Kraaij, Jeroen Raes, Alexandra Zhernakova
Large-scale association analyses identify host factors influencing human gut microbiome composition. Nature genetics 53 (2) (2021)
Sofia Kirke Forslund-Startceva, Rima Chakaroun, Maria Zimmermann-Kogadeeva, Lajos Markó, Judith Aron-Wisnewsky, Trine Nielsen, Lucas Moitinho-Silva, Thomas S B Schmidt, Gwen Falony, Sara Vieira-Silva, Solia Adriouch, Renato Jc Alves, Karen Assmann, Jean-Philippe Bastard, Till Birkner, Robert Caesar, Julien Chilloux, Luis Pedro Coelho, Leopold Fezeu, Nathalie Galleron, Gerard Helft, Richard Isnard, Boyang Ji, Michael Kuhn, Emmanuelle Le Chatelier, Antonis Myridakis, Lisa M Olsson, Nicolas Pons, Edi Prifti, Benoit Quinquis, Hugo Roume, Joe-Elie Salem, Nataliya Sokolovska, Valentina Tremaroli, Mireia Valles-Colomer, Christian Lewinter, Nadja B Sønderskov, Helle Krogh Pedersen, Tue Haldor Hansen, null null, Jens Peter Gøtze, Lars Valeur Køber, Henrik Vestergaard, Torben Hansen, Jean-Daniel Zucker, Serge Hercberg, Jean-Michel Oppert, Ivica Letunic, Jens B Nielsen, Fredrik Bäckhed, Stanislav Dusko Ehrlich, Marc Emmanuel Dumas, Jeroen Raes, Oluf Pedersen, Karine Clement, Michael Stumvoll, Peer Bork
Combinatorial, additive and dose-dependent drug-microbiome associations. Nature (2021)
Veronica Lloréns-Rico, Sara Vieira-Silva, Pedro J Gonçalves, Gwen Falony, Jeroen Raes
Benchmarking microbiome transformations favors experimental quantitative approaches to address compositionality and sampling depth biases. Nature communications 12 (1) (2021)
Mireia Valles-Colomer, Rodrigo Bacigalupe, Sara Vieira-Silva, Shinya Suzuki, Youssef Darzi, Raul Yhossef Tito Tadeo, Takuji Yamada, Nicola Segata, Jeroen Raes, Gwen Falony
Variation and transmission of the human gut microbiota across multiple familial generations. Nature microbiology 7 (1) (2021)
Joshua S Madin, Daniel Aagren Nielsen, Maria Brbic, Ross Corkrey, David Danko, Kyle Edwards, Martin K M Engqvist, Noah Fierer, Jemma L Geoghegan, Michael R Gillings, Nikos C Kyrpides, Elena Litchman, Christopher E Mason, Lisa R Moore, Søren Laurentius Nielsen, Ian T Paulsen, Nathan D Price, T B K Reddy, Matthew A Richards, Eduardo P C Rocha, Thomas M Schmidt, Heba Shaaban, Maulik Shukla, Fran Supek, Sasha G Tetu, Sara Vieira-Silva, Alice R Wattam, David A Westfall, Mark Westoby
A synthesis of bacterial and archaeal phenotypic trait data. Scientific data 7 (1) (2020)
Antonio Molinaro, Pierre Bel Lassen, Marcus Henricsson, Hao Wu, Solia Adriouch, Eugeni Belda, Rima Chakaroun, Trine Nielsen, Per-Olof Bergh, Christine Rouault, Sébastien André, Florian Marquet, Fabrizio Andreelli, Joe-Elie Salem, Karen Assmann, Jean-Philippe Bastard, Sofia Forslund, Emmanuelle Le Chatelier, Gwen Falony, Nicolas Pons, Edi Prifti, Benoit Quinquis, Hugo Roume, Sara Vieira-Silva, Tue Haldor Hansen, Helle Krogh Pedersen, Christian Lewinter, Nadja B Sønderskov, null null, Lars Køber, Henrik Vestergaard, Torben Hansen, Jean-Daniel Zucker, Pilar Galan, Marc Emmanuel Dumas, Jeroen Raes, Jean-Michel Oppert, Ivica Letunic, Jens B Nielsen, Peer Bork, Stanislav Dusko Ehrlich, Michael Stumvoll, Oluf Pedersen, Judith Aron-Wisnewsky, Karine Clement, Fredrik Bäckhed
Imidazole propionate is increased in diabetes and associated with dietary patterns and altered microbial ecology. Nature communications 11 (1) (2020)
Antonio Molinaro, Pierre Bel Lassen, Marcus Henricsson, Hao Wu, Solia Adriouch, Eugeni Belda, Rima Chakaroun, Trine Nielsen, Per-Olof Bergh, Christine Rouault, Sébastien André, Florian Marquet, Fabrizio Andreelli, Joe-Elie Salem, Karen Assmann, Jean-Philippe Bastard, Sofia Forslund, Emmanuelle Le Chatelier, Gwen Falony, Nicolas Pons, Edi Prifti, Benoit Quinquis, Hugo Roume, Sara Vieira-Silva, Tue Haldor Hansen, Helle Krogh Pedersen, Christian Lewinter, Nadja B Sønderskov, null null, Lars Køber, Henrik Vestergaard, Torben Hansen, Jean-Daniel Zucker, Pilar Galan, Marc Emmanuel Dumas, Jeroen Raes, Jean-Michel Oppert, Ivica Letunic, Jens B Nielsen, Peer Bork, Stanislav Dusko Ehrlich, Michael Stumvoll, Oluf Pedersen, Judith Aron-Wisnewsky, Karine Clement, Fredrik Bäckhed
Author Correction: Imidazole propionate is increased in diabetes and associated with dietary patterns and altered microbial ecology. Nature communications 11 (1) (2020)
Sara Vieira-Silva, Gwen Falony, Eugeni Belda, Trine Nielsen, Judith Aron-Wisnewsky, Rima Chakaroun, Sofia K Forslund, Karen Assmann, Mireia Valles-Colomer, Thi Thuy Duyen Nguyen, Sebastian Proost, Edi Prifti, Valentina Tremaroli, Nicolas Pons, Emmanuelle Le Chatelier, Fabrizio Andreelli, Jean-Phillippe Bastard, Luis Pedro Coelho, Nathalie Galleron, Tue H Hansen, Jean-Sébastien Hulot, Christian Lewinter, Helle K Pedersen, Benoit Quinquis, Christine Rouault, Hugo Roume, Joe-Elie Salem, Nadja B Sønderskov, Sothea Touch, null null, Marc Emmanuel Dumas, Stanislav Dusko Ehrlich, Pilar Galan, Jens P Gøtze, Torben Hansen, Jens Juul Holst, Lars Køber, Ivica Letunic, Jens B Nielsen, Jean-Michel Oppert, Michael Stumvoll, Henrik Vestergaard, Jean-Daniel Zucker, Peer Bork, Oluf Pedersen, Fredrik Bäckhed, Karine Clement, Jeroen Raes
Statin therapy is associated with lower prevalence of gut microbiota dysbiosis. Nature 581 (7808) (2020)
David A Hughes, Rodrigo Bacigalupe, Jun Wang, Malte Christoph Rühlemann, Raul Y Tito, Gwen Falony, Marie Joossens, Sara Vieira-Silva, Liesbet Henckaerts, Leen Rymenans, Chloë Verspecht, Susan Ring, Andre Franke, Kaitlin H Wade, Nicholas John Timpson, Jeroen Raes
Genome-wide associations of human gut microbiome variation and implications for causal inference analyses. Nature microbiology 5 (9) (2020)
Sara Vieira-Silva, João Sabino, Mireia Valles-Colomer, Gwen Falony, Gunter Kathagen, Clara Caenepeel, Isabelle Cleynen, Schalk van der Merwe, Severine Vermeire, Jeroen Raes
Quantitative microbiome profiling disentangles inflammation- and bile duct obstruction-associated microbiota alterations across PSC/IBD diagnoses. Nature microbiology 4 (11) (2019)
Mireia Valles-Colomer, Gwen Falony, Youssef Darzi, Ettje F Tigchelaar, Jun Wang, Raul Y Tito, Carmen Schiweck, Alexander Kurilshikov, Marie Joossens, Cisca Wijmenga, Stephan Claes, Lukas Van Oudenhove, Alexandra Zhernakova, Sara Vieira-Silva, Jeroen Raes
The neuroactive potential of the human gut microbiota in quality of life and depression. Nature microbiology 4 (4) (2019)
Clara Depommier, Amandine Everard, Céline Druart, Hubert Plovier, Matthias Van Hul, Sara Vieira-Silva, Gwen Falony, Jeroen Raes, Dominique Maiter, Nathalie M Delzenne, Marie de Barsy, Audrey Loumaye, Michel P Hermans, Jean-Paul Thissen, Willem Meindert de Vos, Patrice D Cani
Supplementation with Akkermansia muciniphila in overweight and obese human volunteers: a proof-of-concept exploratory study. Nature medicine 25 (7) (2019)
Gwen Falony, Doris Vandeputte, Clara Caenepeel, Sara Vieira-Silva, Tanine Daryoush, Severine Vermeire, Jeroen Raes
The human microbiome in health and disease: hype or hope. Acta clinica Belgica 74 (2) (2019)
Lea B S Hansen, Henrik M Roager, Nadja B Søndertoft, Rikke J Gøbel, Mette Kristensen, Mireia Vallès-Colomer, Sara Vieira-Silva, Sabine Ibrügger, Mads Vendelbo Lind, Rasmus B Mærkedahl, Martin Iain Bahl, Mia L Madsen, Jesper Havelund, Gwen Falony, Inge Tetens, Trine Nielsen, Kristine H Allin, Henrik L Frandsen, Bolette Hartmann, Jens Juul Holst, Morten H Sparholt, Jesper Holck, Andreas Blennow, Janne Marie Moll, Anne S Meyer, Camilla Hoppe, Jørgen H Poulsen, Vera Carvalho, Domenico Sagnelli, Marlene D Dalgaard, Anders F Christensen, Magnus Christian Lydolph, Alastair B Ross, Silas Villas-Bôas, Susanne B Pedersen, Thomas Sicheritz-Pontén, Karsten Buschard, Allan Linneberg, Jüri J Rumessen, Claus T Ekstrøm, Christian Ritz, Karsten Kristiansen, H Bjørn Nielsen, Henrik Vestergaard, Nils J Færgeman, Jeroen Raes, Hanne Frøkiær, Torben Hansen, Lotte Lauritzen, Ramneek Gupta, Tine Rask Licht, Oluf Pedersen
A low-gluten diet induces changes in the intestinal microbiome of healthy Danish adults. Nature communications 9 (1) (2018)
Sara Vieira-Silva, Gwen Falony, Youssef Darzi, Gipsi Lima-Mendez, Roberto Garcia Yunta, Shujiro Okuda, Doris Vandeputte, Mireia Valles-Colomer, Falk Hildebrand, Samuel Chaffron, Jeroen Raes
Species-function relationships shape ecological properties of the human gut microbiome. Nature microbiology 1 (8) (2016)
Youssef Darzi, Gwen Falony, Sara Vieira-Silva, Jeroen Raes
Towards biome-specific analysis of meta-omics data. The ISME journal 10 (5) (2015)

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Publication Activity (10 Years)

Top Topics

Top Venues

Sara Vieira-Silva