John-Sebastian Eden

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 33

Top Venues

University of Sydney

University of New South Wales (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Sydney Jan 1o 2014

Australia

NHMRC Early Career Fellow :: School of Biological Sciences & Sydney Medical School

Education History

University of New South Wales Mar 1o 2008 - Mar 1o 2012

Australia

PHD

Publications

Rachel L Tulloch, Karan Kim, Chisha T Sikazwe, Alice Michie, Rebecca Burrell, Edward C Holmes, Dominic E Dwyer, Philip N Britton, Jen Kok, John-Sebastian Eden
RAPID prep : A Simple, Fast Protocol for RNA Metagenomic Sequencing of Clinical Samples. Viruses 15 (4) (2023)
Rachel L Tulloch, Karan Kim, Chisha T Sikazwe, Alice Michie, Rebecca Burrell, Edward C Holmes, Dominic E Dwyer, Philip N Britton, Jen Kok, John-Sebastian Eden
RAPID prep : A Simple, Fast Protocol for RNA Metagenomic Sequencing of Clinical Samples. Viruses 15 (4) (2023)
Rachel L Tulloch, Karan Kim, Chisha T Sikazwe, Alice Michie, Rebecca Burrell, Edward C Holmes, Dominic E Dwyer, Philip N Britton, Jen Kok, John-Sebastian Eden
RAPID prep : A Simple, Fast Protocol for RNA Metagenomic Sequencing of Clinical Samples. Viruses 15 (4) (2023)
Rachel L Tulloch, Karan Kim, Chisha T Sikazwe, Alice Michie, Rebecca Burrell, Edward C Holmes, Dominic E Dwyer, Philip N Britton, Jen Kok, John-Sebastian Eden
RAPID prep : A Simple, Fast Protocol for RNA Metagenomic Sequencing of Clinical Samples. Viruses 15 (4) (2023)
Katie Fisher, Xiao Qian Wang, Ashley Lee, Vincent Morcilla, Anneke de Vries, Eunok Lee, John-Sebastian Eden, Steven G Deeks, Anthony D Kelleher, Sarah Palmer
Plasma-Derived HIV-1 Virions Contain Considerable Levels of Defective Genomes. Journal of virology 96 (6) (2022)
Zhaoqian Wang, Ha V Dang, Moushimi Amaya, Yan Xu, Randy Yin, Lianying Yan, Andrew C Hickey, Edward J Annand, Bethany A Horsburgh, Peter A Reid, Ina L Smith, John-Sebastian Eden, Kai Xu, Christopher C Broder, David Veesler
Potent monoclonal antibody-mediated neutralization of a divergent Hendra virus variant. Proceedings of the National Academy of Sciences of the United States of America 119 (22) (2022)
John-Sebastian Eden, Chisha Sikazwe, Ruopeng Xie, Yi-Mo Deng, Sheena G Sullivan, Alice Michie, Avram Levy, Elena Cutmore, Christopher C Blyth, Philip N Britton, Nigel Crawford, Xiaomin Dong, Dominic E Dwyer, Kimberly M Edwards, Bethany A Horsburgh, David Anthony Foley, Karina Kennedy, Cara Minney-Smith, David Speers, Rachel L Tulloch, Edward C Holmes, Vijaykrishna Dhanasekaran, David W Smith, Jen Kok, Ian G Barr, null null
Off-season RSV epidemics in Australia after easing of COVID-19 restrictions. Nature communications 13 (1) (2022)
Eunok Lee, Kerrie Sandgren, Gabriel Duette, Vicki V Stylianou, Rajiv Khanna, John-Sebastian Eden, Emily Blyth, David Gottlieb, Anthony L Cunningham, Sarah Palmer
Identification of SARS-CoV-2 Nucleocapsid and Spike T-Cell Epitopes for Assessing T-Cell Immunity. Journal of virology 95 (6) (2021)
Rachel L Tulloch, Jen Kok, Ian Carter, Dominic E Dwyer, John-Sebastian Eden
An Amplicon-Based Approach for the Whole-Genome Sequencing of Human Metapneumovirus. Viruses 13 (3) (2021)
Bethany A Horsburgh, Bonnie Hiener, Katie Fisher, Eunok Lee, Hannah Morgan, John-Sebastian Eden, Susanne von Stockenstrom, Lina Odevall, Jeffrey M Milush, Rebecca Hoh, Rémi Fromentin, Nicolas Chomont, Frederick M Hecht, Timothy E Schlub, Steven G Deeks, Sarah Palmer
Cellular activation, differentiation and proliferation influence the dynamics of genetically-intact proviruses over time. The Journal of infectious diseases (2021)
Ashleigh F Porter, Joanna Cobbin, Ci-Xiu Li, John-Sebastian Eden, Edward C Holmes
Metagenomic Identification of Viral Sequences in Laboratory Reagents. Viruses 13 (11) (2021)
Mark Robertson, John-Sebastian Eden, Avram Levy, Ian Carter, Rachel L Tulloch, Elena J Cutmore, Bethany A Horsburgh, Chisha T Sikazwe, Dominic E Dwyer, David W Smith, Jen Kok
The spatial-temporal dynamics of respiratory syncytial virus infections across the east-west coasts of Australia during 2016-17. Virus evolution 7 (2) (2021)
Wei-Shan Chang, Ci-Xiu Li, Jane Hall, John-Sebastian Eden, Timothy H Hyndman, Edward C Holmes, Karrie Rose
Meta-Transcriptomic Discovery of a Divergent Circovirus and a Chaphamaparvovirus in Captive Reptiles with Proliferative Respiratory Syndrome. Viruses 12 (10) (2020)
Rowena A Bull, Thiruni N Adikari, James M Ferguson, Jillian M Hammond, Igor Stevanovski, Alicia G Beukers, Zin Naing, Malinna Yeang, Andrey Verich, Hasindu Gamaarachchi, Ki Wook Kim, Fabio Luciani, Sacha Stelzer-Braid, John-Sebastian Eden, William D Rawlinson, Sebastiaan J Van Hal, Ira W Deveson
Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis. Nature communications 11 (1) (2020)
Rebecca J Rockett, Alicia Arnott, Connie Lam, Rosemarie Sadsad, Verlaine J Timms, Karen-Ann Gray, John-Sebastian Eden, Sheryl Le Chang, Mailie L Gall, Jenny L Draper, Eby M Sim, Nathan L Bachmann, Ian Carter, Kerri Basile, Roy Byun, Matthew V N O'Sullivan, Sharon C-A Chen, Susan Maddocks, Tania C Sorrell, Dominic E Dwyer, Edward C Holmes, Jen Kok, Mikhail Prokopenko, Vitali Sintchenko
Revealing COVID-19 transmission in Australia by SARS-CoV-2 genome sequencing and agent-based modeling. Nature medicine 26 (9) (2020)
Tam Thi Nguyen, Thach Ngoc Pham, Trang Dinh Van, Trang Thu Nguyen, Diep Thi Ngoc Nguyen, Hoa Nguyen Minh Le, John-Sebastian Eden, Rebecca J Rockett, Thuong Thi Hong Nguyen, Bich Thi Ngoc Vu, Giang Van Tran, Tan Van Le, Dominic E Dwyer, H Rogier van Doorn, null null
Genetic diversity of SARS-CoV-2 and clinical, epidemiological characteristics of COVID-19 patients in Hanoi, Vietnam. PloS one 15 (11) (2020)
Olivia M H Turnbull, Ayda Susana Ortiz-Baez, John-Sebastian Eden, Mang Shi, Jane E Williamson, Troy F Gaston, Yong-Zhen Zhang, Edward C Holmes, Jemma L Geoghegan
Meta-Transcriptomic Identification of Divergent Amnoonviridae in Fish. Viruses 12 (11) (2020)
John-Sebastian Eden, Rebecca Rockett, Ian Carter, Hossinur Rahman, Joep de Ligt, James Hadfield, Matthew Storey, Xiaoyun Ren, Rachel Tulloch, Kerri Basile, Jessica Wells, Roy Byun, Nicky Gilroy, Matthew V O'Sullivan, Vitali Sintchenko, Sharon C Chen, Susan Maddocks, Tania C Sorrell, Edward C Holmes, Dominic E Dwyer, Jen Kok, null null
An emergent clade of SARS-CoV-2 linked to returned travellers from Iran. Virus evolution 6 (1) (2020)
Ayda Susana Ortiz-Baez, John-Sebastian Eden, Craig Moritz, Edward C Holmes
A Divergent Articulavirus in an Australian Gecko Identified Using Meta-Transcriptomics and Protein Structure Comparisons. Viruses 12 (6) (2020)
Frederico F Vaz, Tânia F Raso, Jessica E Agius, Tony Hunt, Alan Leishman, John-Sebastian Eden, David N Phalen
Opportunistic sampling of wild native and invasive birds reveals a rich diversity of adenoviruses in Australia. Virus evolution 6 (1) (2020)
Wei-Shan Chang, John-Sebastian Eden, Jane Hall, Mang Shi, Karrie Rose, Edward C Holmes
Metatranscriptomic Analysis of Virus Diversity in Urban Wild Birds with Paretic Disease. Journal of virology 94 (18) (2020)
Ashleigh F Porter, John H-O Pettersson, Wei-Shan Chang, Erin Harvey, Karrie Rose, Mang Shi, John-Sebastian Eden, Jan P Buchmann, Craig Moritz, Edward C Holmes
Novel hepaci- and pegi-like viruses in native Australian wildlife and non-human primates. Virus evolution 6 (2) (2020)
Jessica E Agius, David N Phalen, Karrie Rose, John-Sebastian Eden
New insights into Sauropsid Papillomaviridae evolution and epizootiology: discovery of two novel papillomaviruses in native and invasive Island geckos. Virus evolution 5 (2) (2019)
Ashleigh F Porter, Mang Shi, John-Sebastian Eden, Yong-Zhen Zhang, Edward C Holmes
Diversity and Evolution of Novel Invertebrate DNA Viruses Revealed by Meta-Transcriptomics. Viruses 11 (12) (2019)
Wei-Shan Chang, John H-O Pettersson, Callum Le Lay, Mang Shi, Nathan Lo, Michelle Wille, John-Sebastian Eden, Edward C Holmes
Novel hepatitis D-like agents in vertebrates and invertebrates. Virus evolution 5 (2) (2019)
Jemma L Geoghegan, Vanessa Pirotta, Erin Harvey, Alastair Smith, Jan P Buchmann, Martin Ostrowski, John-Sebastian Eden, Robert G Harcourt, Edward C Holmes
Virological Sampling of Inaccessible Wildlife with Drones. Viruses 10 (6) (2018)
Jennifer H Lun, Joanne Hewitt, Alefiya Sitabkhan, John-Sebastian Eden, Daniel Enosi Tuipulotu, Natalie E Netzler, Leigh Morrell, Juan Merif, Richard Jones, Bixing Huang, David Warrilow, Kelly-Anne Ressler, Mark J Ferson, Dominic E Dwyer, Jen Kok, William D Rawlinson, Daniel Deere, Nicholas D Crosbie, Peter A White
Emerging recombinant noroviruses identified by clinical and waste water screening. Emerging microbes & infections 7 (1) (2018)
Francesca Di Giallonardo, Jen Kok, Marian Fernandez, Ian Carter, Jemma L Geoghegan, Dominic E Dwyer, Edward C Holmes, John-Sebastian Eden
Evolution of Human Respiratory Syncytial Virus (RSV) over Multiple Seasons in New South Wales, Australia. Viruses 10 (9) (2018)
Michelle Wille, John-Sebastian Eden, Mang Shi, Marcel Klaassen, Aeron C Hurt, Edward C Holmes
Virus-virus interactions and host ecology are associated with RNA virome structure in wild birds. Molecular ecology 27 (24) (2018)
Zoe Patterson Ross, Jennifer Klunk, Gino Fornaciari, Valentina Giuffra, Sebastián Duchêne, Ana T Duggan, Debi Poinar, Mark W Douglas, John-Sebastian Eden, Edward C Holmes, Hendrik N Poinar
The paradox of HBV evolution as revealed from a 16th century mummy. PLoS pathogens 14 (1) (2018)
Joanna C A Cobbin, Philip N Britton, Rebecca Burrell, Deepali Thosar, Kierrtana Selvakumar, John-Sebastian Eden, Cheryl A Jones, Edward C Holmes
A complex mosaic of enteroviruses shapes community-acquired hand, foot and mouth disease transmission and evolution within a single hospital. Virus evolution 4 (2) (2018)
Michelle Wille, Hans J Netter, Margaret Littlejohn, Lilly Yuen, Mang Shi, John-Sebastian Eden, Marcel Klaassen, Edward C Holmes, Aeron C Hurt
A Divergent Hepatitis D-Like Agent in Birds. Viruses 10 (12) (2018)
Peter J Kerr, Isabella M Cattadori, Matthew B Rogers, Adam Fitch, Adam Geber, June Liu, Derek G Sim, Brian Boag, John-Sebastian Eden, Elodie Ghedin, Andrew F Read, Edward C Holmes
Genomic and phenotypic characterization of myxoma virus from Great Britain reveals multiple evolutionary pathways distinct from those in Australia. PLoS pathogens 13 (3) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

John-Sebastian Eden