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Jesse G Meyer

ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 29

Top Venues

Analytical chemistry

bioRxiv : the preprint server for biology

Nature biotechnology

Methods and protocols

University of California San Diego (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

University of California San Diego - Jun 1o 2015

United States

PHD :: Chemistry and Biochemistry

Publications

Amanda Momenzadeh, Yuming Jiang, Simion Kreimer, Laura E Teigen, Carlos S Zepeda, Ali Haghani, Mitra Mastali, Yang Song, Alexandre Hutton, Sarah J Parker, Jennifer E Van Eyk, Christopher W Sundberg, Jesse G Meyer
Complete Workflow for High Throughput Human Single Skeletal Muscle Fiber Proteomics. bioRxiv : the preprint server for biology (2023)
Amanda Momenzadeh, Yuming Jiang, Simion Kreimer, Laura E Teigen, Carlos S Zepeda, Ali Haghani, Mitra Mastali, Yang Song, Alexandre Hutton, Sarah J Parker, Jennifer E Van Eyk, Christopher W Sundberg, Jesse G Meyer
Complete Workflow for High Throughput Human Single Skeletal Muscle Fiber Proteomics. bioRxiv : the preprint server for biology (2023)
Amanda Momenzadeh, Simion Kreimer, Dongchuan Guo, Matthew Ayres, Daniel Berman, Kuang-Yuh Chyu, Prediman K Shah, Dianna Milewicz, Ali Azizzadeh, Jesse G Meyer, Sarah J Parker
Machine Learning Identifies Plasma Proteomic Signatures of Descending Thoracic Aortic Disease. bioRxiv : the preprint server for biology (2023)
Amanda Momenzadeh, Simion Kreimer, Dongchuan Guo, Matthew Ayres, Daniel Berman, Kuang-Yuh Chyu, Prediman K Shah, Dianna Milewicz, Ali Azizzadeh, Jesse G Meyer, Sarah J Parker
Machine Learning Identifies Plasma Proteomic Signatures of Descending Thoracic Aortic Disease. bioRxiv : the preprint server for biology (2023)
Yuming Jiang, Ivan Salladay-Perez, Amanda Momenzadeh, Anthony J Covarrubias, Jesse G Meyer
Simultaneous Multi-Omics Analysis by Direct Infusion Mass Spectrometry (SMAD-MS). bioRxiv : the preprint server for biology (2023)
Pavel Sinitcyn, Alicia L Richards, Robert J Weatheritt, Dain R Brademan, Harald Marx, Evgenia Shishkova, Jesse G Meyer, Alexander S Hebert, Michael S Westphall, Benjamin J Blencowe, Juergen Cox, Joshua J Coon
Global detection of human variants and isoforms by deep proteome sequencing. Nature biotechnology (2023)
Amanda Momenzadeh, Simion Kreimer, Dongchuan Guo, Matthew Ayres, Daniel Berman, Kuang-Yuh Chyu, Prediman K Shah, Dianna Milewicz, Ali Azizzadeh, Jesse G Meyer, Sarah J Parker
Machine Learning Identifies Plasma Proteomic Signatures of Descending Thoracic Aortic Disease. bioRxiv : the preprint server for biology (2023)
Simion Kreimer, Aleksandra Binek, Blandine Chazarin, Jae Hyung Cho, Ali Haghani, Alexandre Hutton, Eduardo Marbán, Mitra Mastali, Jesse G Meyer, Thássio Ricardo R Mesquita, Yang Song, Jennifer E Van Eyk, Sarah J Parker
High-Throughput Single-Cell Proteomic Analysis of Organ-Derived Heterogeneous Cell Populations by Nanoflow Dual-Trap Single-Column Liquid Chromatography. Analytical chemistry (2023)
Amanda Momenzadeh, Yuming Jiang, Simion Kreimer, Laura E Teigen, Carlos S Zepeda, Ali Haghani, Mitra Mastali, Yang Song, Alexandre Hutton, Sarah J Parker, Jennifer E Van Eyk, Christopher W Sundberg, Jesse G Meyer
A Complete Workflow for High Throughput Human Single Skeletal Muscle Fiber Proteomics. Journal of the American Society for Mass Spectrometry (2023)
Amanda Momenzadeh, Simion Kreimer, Dongchuan Guo, Matthew Ayres, Daniel Berman, Kuang-Yuh Chyu, Prediman K Shah, Dianna Milewicz, Ali Azizzadeh, Jesse G Meyer, Sarah J Parker
Machine Learning Identifies Plasma Proteomic Signatures of Descending Thoracic Aortic Disease. bioRxiv : the preprint server for biology (2023)
Yuming Jiang, Alexandre Hutton, Caleb W Cranney, Jesse G Meyer
Label-Free Quantification from Direct Infusion Shotgun Proteome Analysis (DISPA-LFQ) with CsoDIAq Software. Analytical chemistry 95 (2) (2022)
Simion Kreimer, Ali Haghani, Aleksandra Binek, Alisse Hauspurg, Saeed Seyedmohammad, Alejandro Rivas, Amanda Momenzadeh, Jesse G Meyer, Koen Raedschelders, Jennifer E Van Eyk
Parallelization with Dual-Trap Single-Column Configuration Maximizes Throughput of Proteomic Analysis. Analytical chemistry 94 (36) (2022)
Quinn Dickinson, Andreas Aufschnaiter, Martin Ott, Jesse G Meyer
Multi-omic integration by machine learning (MIMaL). Bioinformatics (Oxford, England) 38 (21) (2022)
Yuming Jiang, Alexandre Hutton, Caleb W Cranney, Jesse G Meyer
Label-Free Quantification from Direct Infusion Shotgun Proteome Analysis (DISPA-LFQ) with CsoDIAq Software. Analytical chemistry 95 (2) (2022)
Quinn Dickinson, Jesse G Meyer
Positional SHAP (PoSHAP) for Interpretation of machine learning models trained from biological sequences. PLoS computational biology 18 (1) (2022)
Yuming Jiang, Alexandre Hutton, Caleb W Cranney, Jesse G Meyer
Label-Free Quantification from Direct Infusion Shotgun Proteome Analysis (DISPA-LFQ) with CsoDIAq Software. Analytical chemistry 95 (2) (2022)
Yuming Jiang, Alexandre Hutton, Caleb W Cranney, Jesse G Meyer
Label-Free Quantification from Direct Infusion Shotgun Proteome Analysis (DISPA-LFQ) with CsoDIAq Software. Analytical chemistry 95 (2) (2022)
Yuming Jiang, Alexandre Hutton, Caleb W Cranney, Jesse G Meyer
Label-Free Quantification from Direct Infusion Shotgun Proteome Analysis (DISPA-LFQ) with CsoDIAq Software. Analytical chemistry 95 (2) (2022)
Amanda Momenzadeh, Ali Shamsa, Jesse G Meyer
Bias or biology? Importance of model interpretation in machine learning studies from electronic health records. JAMIA open 5 (3) (2022)
Yuming Jiang, Alexandre Hutton, Caleb W Cranney, Jesse G Meyer
Label-Free Quantification from Direct Infusion Shotgun Proteome Analysis (DISPA-LFQ) with CsoDIAq Software. Analytical chemistry (2022)
Caleb W Cranney, Jesse G Meyer
CsoDIAq Software for Direct Infusion Shotgun Proteome Analysis. Analytical chemistry 93 (36) (2021)
Maria Dermit, Trenton M Peters-Clarke, Evgenia Shishkova, Jesse G Meyer
Peptide Correlation Analysis (PeCorA) Reveals Differential Proteoform Regulation. Journal of proteome research 20 (4) (2020)
Jesse G Meyer, Natalie M Niemi, David J Pagliarini, Joshua J Coon
Quantitative shotgun proteome analysis by direct infusion. Nature methods 17 (12) (2020)
Stephanie Truong, Annie Park, Salem Kamalay, Nancy Hung, Jesse G Meyer, Nicole Nguyen, Amanda Momenzadeh
Glycemic Control in Adult Surgical Patients Receiving Regular Insulin Added to Parenteral Nutrition vs Insulin Glargine: A Retrospective Chart Review. Nutrition in clinical practice : official publication of the American Society for Parenteral and Enteral Nutrition 34 (5) (2019)
Jesse G Meyer
Fast Proteome Identification and Quantification from Data-Dependent Acquisition-Tandem Mass Spectrometry (DDA MS/MS) Using Free Software Tools. Methods and protocols 2 (1) (2019)
Jesse G Meyer, Shengchao Liu, Ian J Miller, Joshua J Coon, Anthony Gitter
Learning Drug Functions from Chemical Structures with Convolutional Neural Networks and Random Forests. Journal of chemical information and modeling 59 (10) (2019)
Jesse G Meyer, Thelma Y Garcia, Birgit Schilling, Bradford W Gibson, Deepak Ashok Lamba
Proteome and Secretome Dynamics of Human Retinal Pigment Epithelium in Response to Reactive Oxygen Species. Scientific reports 9 (1) (2019)
Jesse G Meyer, Samir Softic, Nathan Basisty, Matthew J Rardin, Eric Verdin, Bradford W Gibson, Olga Ilkayeva, Christopher B Newgard, C Ronald Kahn, Birgit Schilling
Temporal dynamics of liver mitochondrial protein acetylation and succinylation and metabolites due to high fat diet and/or excess glucose or fructose. PloS one 13 (12) (2018)
Ryan J Lumpkin, Hongbo Gu, Yiying Zhu, Marilyn Leonard, Alla S Ahmad, Karl R Clauser, Jesse G Meyer, Eric J Bennett, Elizabeth A Komives
Site-specific identification and quantitation of endogenous SUMO modifications under native conditions. Nature communications 8 (1) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Jesse G Meyer