Oliver M Crook

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 20

Top Topics

Mass Spectrometry

Inflammatory Response

Gas Chromatography

Top Venues

Nature communications

ACS measurement science au

Journal of proteome research

PLoS computational biology

This page only lists publications with an associated author ORCID identifier.

Publications

Yuming Jiang, Devasahayam Arokia Balaya Rex, Dina Schuster, Benjamin A Neely, Germán L Rosano, Norbert Volkmar, Amanda Momenzadeh, Trenton M Peters-Clarke, Susan B Egbert, Simion Kreimer, Emma H Doud, Oliver M Crook, Amit Kumar Yadav, Muralidharan Vanuopadath, Adrian D Hegeman, Martín L Mayta, Anna G Duboff, Nicholas M Riley, Robert L Moritz, Jesse G Meyer
Comprehensive Overview of Bottom-Up Proteomics Using Mass Spectrometry. ACS measurement science au 4 (4) (2024)
Yuming Jiang, Devasahayam Arokia Balaya Rex, Dina Schuster, Benjamin A Neely, Germán L Rosano, Norbert Volkmar, Amanda Momenzadeh, Trenton M Peters-Clarke, Susan B Egbert, Simion Kreimer, Emma H Doud, Oliver M Crook, Amit Kumar Yadav, Muralidharan Vanuopadath, Adrian D Hegeman, Martín L Mayta, Anna G Duboff, Nicholas M Riley, Robert L Moritz, Jesse G Meyer
Comprehensive Overview of Bottom-Up Proteomics Using Mass Spectrometry. ACS measurement science au 4 (4) (2024)
Yuming Jiang, Devasahayam Arokia Balaya Rex, Dina Schuster, Benjamin A Neely, Germán L Rosano, Norbert Volkmar, Amanda Momenzadeh, Trenton M Peters-Clarke, Susan B Egbert, Simion Kreimer, Emma H Doud, Oliver M Crook, Amit Kumar Yadav, Muralidharan Vanuopadath, Adrian D Hegeman, Martín L Mayta, Anna G Duboff, Nicholas M Riley, Robert L Moritz, Jesse G Meyer
Comprehensive Overview of Bottom-Up Proteomics Using Mass Spectrometry. ACS measurement science au 4 (4) (2024)
Yuming Jiang, Devasahayam Arokia Balaya Rex, Dina Schuster, Benjamin A Neely, Germán L Rosano, Norbert Volkmar, Amanda Momenzadeh, Trenton M Peters-Clarke, Susan B Egbert, Simion Kreimer, Emma H Doud, Oliver M Crook, Amit Kumar Yadav, Muralidharan Vanuopadath, Adrian D Hegeman, Martín L Mayta, Anna G Duboff, Nicholas M Riley, Robert L Moritz, Jesse G Meyer
Comprehensive Overview of Bottom-Up Proteomics Using Mass Spectrometry. ACS measurement science au 4 (4) (2024)
Oliver M Crook, Nathan Gittens, Chun-Wa Chung, Charlotte M Deane
A Functional Bayesian Model for Hydrogen-Deuterium Exchange Mass Spectrometry. Journal of proteome research (2023)
Eneko Villanueva, Tom S Smith, Mariavittoria Pizzinga, Mohamed Elzek, Rayner M L Queiroz, Robert F Harvey, Lisa M Breckels, Oliver M Crook, Mie Monti, Veronica Dezi, Anne E Willis, Kathryn S Lilley
System-wide analysis of RNA and protein subcellular localization dynamics. Nature methods (2023)
Nicola M Moloney, Konstantin Barylyuk, Eelco C Tromer, Oliver M Crook, Lisa M Breckels, Kathryn S Lilley, Ross Frederick Waller, Paula MacGregor
Mapping diversity in African trypanosomes using high resolution spatial proteomics. Nature communications 14 (1) (2023)
Oliver M Crook, Colin T R Davies, Lisa M Breckels, Josie A Christopher, Laurent Gatto, Paul D W Kirk, Kathryn S Lilley
Inferring differential subcellular localisation in comparative spatial proteomics using BANDLE. Nature communications 13 (1) (2022)
Igor M Soares, Fernando H F Camargo, Adriano Marques, Oliver M Crook
Improving lab-of-origin prediction of genetically engineered plasmids via deep metric learning. Nature computational science 2 (4) (2022)
Igor M Soares, Fernando H F Camargo, Adriano Marques, Oliver M Crook
Improving lab-of-origin prediction of genetically engineered plasmids via deep metric learning. Nature computational science 2 (4) (2022)
Oliver M Crook, Chun-Wa Chung, Charlotte M Deane
Empirical Bayes functional models for hydrogen deuterium exchange mass spectrometry. Communications biology 5 (1) (2022)
Oliver M Crook, Chun-Wa Chung, Charlotte M Deane
Challenges and Opportunities for Bayesian Statistics in Proteomics. Journal of proteome research 21 (4) (2022)
Oliver M Crook, Kelsey Lane Warmbrod, Greg Lipstein, Christine Chung, Christopher W Bakerlee, T Greg McKelvey, Shelly R Holland, Jacob L Swett, Kevin M Esvelt, Ethan C Alley, William J Bradshaw
Analysis of the first genetic engineering attribution challenge. Nature communications 13 (1) (2022)
Tom S Smith, Anna Andrejeva, Josie Christopher, Oliver M Crook, Mohamed Elzek, Kathryn S Lilley
Prior Signal Acquisition Software Versions for Orbitrap Underestimate Low Isobaric Mass Tag Intensities, Without Detriment to Differential Abundance Experiments. ACS measurement science Au 2 (3) (2022)
Siqi Fang, Paul D W Kirk, Marcus Bantscheff, Kathryn S Lilley, Oliver M Crook
A Bayesian semi-parametric model for thermal proteome profiling. Communications biology 4 (1) (2021)
Claire M Mulvey, Lisa M Breckels, Oliver M Crook, David J Sanders, Andre L R Ribeiro, Aikaterini Geladaki, Andy Christoforou, Nina Kočevar Britovšek, Tracey Hurrell, Michael J Deery, Laurent Gatto, Andrew Mark Smith, Kathryn S Lilley
Spatiotemporal proteomic profiling of the pro-inflammatory response to lipopolysaccharide in the THP-1 human leukaemia cell line. Nature communications 12 (1) (2021)
Oliver M Crook, Aikaterini Geladaki, Daniel J H Nightingale, Owen L Vennard, Kathryn S Lilley, Laurent Gatto, Paul D W Kirk
A semi-supervised Bayesian approach for simultaneous protein sub-cellular localisation assignment and novelty detection. PLoS computational biology 16 (11) (2020)
John J H Shin, Oliver M Crook, Alicia C Borgeaud, Jérôme Cattin-Ortolá, Sew Peak Chew, Lisa M Breckels, Alison K Gillingham, Jessica Chadwick, Kathryn S Lilley, Sean Munro
Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers. Nature communications 11 (1) (2020)
Aikaterini Geladaki, Nina Kočevar Britovšek, Lisa M Breckels, Tom S Smith, Owen L Vennard, Claire M Mulvey, Oliver M Crook, Laurent Gatto, Kathryn S Lilley
Combining LOPIT with differential ultracentrifugation for high-resolution spatial proteomics. Nature communications 10 (1) (2019)
Oliver M Crook, Claire M Mulvey, Paul D W Kirk, Kathryn S Lilley, Laurent Gatto
A Bayesian mixture modelling approach for spatial proteomics. PLoS computational biology 14 (11) (2018)