John H Morris (John Morris)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2022
Publications (10 Years): 18

Top Topics

Network Analysis

Respiratory Syndrome Coronavirus

Trypanosoma Cruzi

Top Venues

Journal of proteome research

PLoS computational biology

Protein science : a publication of the Protein Society

This page only lists publications with an associated author ORCID identifier.

Publications

Nadezhda Tsankova Doncheva, John H Morris, Henrietta Holze, Rebecca Kirsch, Katerina C Nastou, Yesid Cuesta-Astroz, Thomas Rattei, Damian Szklarczyk, Christian von Mering, Lars Juhl Jensen
Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks. Journal of proteome research (2022)
Nadezhda Tsankova Doncheva, John H Morris, Henrietta Holze, Rebecca Kirsch, Katerina C Nastou, Yesid Cuesta-Astroz, Thomas Rattei, Damian Szklarczyk, Christian von Mering, Lars Juhl Jensen
Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks. Journal of proteome research 22 (2) (2022)
Nadezhda Tsankova Doncheva, John H Morris, Henrietta Holze, Rebecca Kirsch, Katerina C Nastou, Yesid Cuesta-Astroz, Thomas Rattei, Damian Szklarczyk, Christian von Mering, Lars Juhl Jensen
Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks. Journal of proteome research 22 (2) (2022)
Mikaela Koutrouli, John H Morris, Lars Juhl Jensen
U-CIE [/juː 'siː/]: Color encoding of high-dimensional data. Protein science : a publication of the Protein Society 31 (9) (2022)
Nadezhda Tsankova Doncheva, John H Morris, Henrietta Holze, Rebecca Kirsch, Katerina C Nastou, Yesid Cuesta-Astroz, Thomas Rattei, Damian Szklarczyk, Christian von Mering, Lars Juhl Jensen
Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks. Journal of proteome research 22 (2) (2022)
Nadezhda Tsankova Doncheva, John H Morris, Henrietta Holze, Rebecca Kirsch, Katerina C Nastou, Yesid Cuesta-Astroz, Thomas Rattei, Damian Szklarczyk, Christian von Mering, Lars Juhl Jensen
Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks. Journal of proteome research 22 (2) (2022)
Nadezhda Tsankova Doncheva, John H Morris, Henrietta Holze, Rebecca Kirsch, Katerina C Nastou, Yesid Cuesta-Astroz, Thomas Rattei, Damian Szklarczyk, Christian von Mering, Lars Juhl Jensen
Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks. Journal of proteome research 22 (2) (2022)
Krishna Choudhary, Elaine C Meng, J Javier Diaz-Mejia, Gary D Baider, Alexander R Pico, John H Morris
scNetViz: from single cells to networks using Cytoscape. F1000Research 10 (2021)
Hannes Braberg, Ignacia Echeverria, Stefan Bohn, Peter Cimermancic, Anthony L Shiver, Richard Alexander, Jiewei Xu, Michael Shales, Raghuvar Dronamraju, Shuangying Jiang, Gajendradhar Dwivedi, Derek Bogdanoff, Kaitlin K Chaung, Ruth Hüttenhain, Shuyi Wang, David Mavor, Riccardo Pellarin, Dina Schneidman-Duhovny, Joel S Bader, Brian K Shoichet, John H Morris, James E Haber, Brian D Strahl, Carol A Gross, Jun-Biao Dai, Jef D Boeke, Andrej Sali, Nevan J Krogan
Genetic interaction mapping informs integrative structure determination of protein complexes. Science (New York, N.Y.) 370 (6522) (2021)
Marc Legeay, Nadezhda T Doncheva, John H Morris, Lars Juhl Jensen
Visualize omics data on networks with Omics Visualizer, a Cytoscape App. F1000Research (2020)
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Elaine C Meng, Gregory S Couch, Tristan I Croll, John H Morris, Thomas E Ferrin
UCSF ChimeraX: Structure visualization for researchers, educators, and developers. Protein science : a publication of the Protein Society 30 (1) (2020)
Marc Legeay, Nadezhda T Doncheva, John H Morris, Lars Juhl Jensen
Visualize omics data on networks with Omics Visualizer, a Cytoscape App. F1000Research 9 (2020)
J Javier Diaz-Mejia, Elaine C Meng, Alexander R Pico, Sonya A MacParland, Troy Ketela, Trevor J Pugh, Gary D Baider, John H Morris
Evaluation of methods to assign cell type labels to cell clusters from single-cell RNA-sequencing data. F1000Research (2019)
G Elisabeta Marai, Bruno Pinaud, Katja Bühler, Alexander Lex, John H Morris
Ten simple rules to create biological network figures for communication. PLoS computational biology 15 (9) (2019)
J Javier Diaz-Mejia, Elaine C Meng, Alexander R Pico, Sonya A MacParland, Troy Ketela, Trevor J Pugh, Gary D Baider, John H Morris
Evaluation of methods to assign cell type labels to cell clusters from single-cell RNA-sequencing data. F1000Research (2019)
J Javier Diaz-Mejia, Elaine C Meng, Alexander R Pico, Sonya A MacParland, Troy Ketela, Trevor J Pugh, Gary D Baider, John H Morris
Evaluation of methods to assign cell type labels to cell clusters from single-cell RNA-sequencing data. F1000Research 8 (2019)
Nadezhda Tsankova Doncheva, John H Morris, Jan Gorodkin, Lars Juhl Jensen
Cytoscape StringApp: Network Analysis and Visualization of Proteomics Data. Journal of proteome research 18 (2) (2018)
Angela F Harper, Janelle B Leuthaeuser, Patricia C Babbitt, John H Morris, Thomas E Ferrin, Leslie B Poole, Jacquelyn S Fetrow
An Atlas of Peroxiredoxins Created Using an Active Site Profile-Based Approach to Functionally Relevant Clustering of Proteins. PLoS computational biology 13 (2) (2017)