Lukas M Weber

ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 16

Top Venues

eLife

F1000Research

Nature medicine

The Journal of experimental medicine

University of Zurich (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

University of Zurich

Switzerland

PHD :: Institute of Molecular Life Sciences

ETH Zurich

Switzerland

MSC

Publications

Lukas M Weber, Heena R Divecha, Matthew N Tran, Sang Ho Kwon, Abby Spangler, Kelsey D Montgomery, Madhavi Tippani, Rahul Bharadwaj, Joel E Kleinman, Stephanie Cerceo Page, Thomas M Hyde, Leonardo Collado-Torres, Kristen R Maynard, Keri Martinowich, Stephanie C Hicks
The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics. eLife 12 (2024)
Lukas M Weber, Heena R Divecha, Matthew N Tran, Sang Ho Kwon, Abby Spangler, Kelsey D Montgomery, Madhavi Tippani, Rahul Bharadwaj, Joel E Kleinman, Stephanie Cerceo Page, Thomas M Hyde, Leonardo Collado-Torres, Kristen R Maynard, Keri Martinowich, Stephanie C Hicks
The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics. eLife 12 (2024)
Lukas M Weber, Heena R Divecha, Matthew N Tran, Sang Ho Kwon, Abby Spangler, Kelsey D Montgomery, Madhavi Tippani, Rahul Bharadwaj, Joel E Kleinman, Stephanie Cerceo Page, Thomas M Hyde, Leonardo Collado-Torres, Kristen R Maynard, Keri Martinowich, Stephanie C Hicks
The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics. eLife 12 (2024)
Lukas M Weber, Heena R Divecha, Matthew N Tran, Sang Ho Kwon, Abby Spangler, Kelsey D Montgomery, Madhavi Tippani, Rahul Bharadwaj, Joel E Kleinman, Stephanie Cerceo Page, Thomas M Hyde, Leonardo Collado-Torres, Kristen R Maynard, Keri Martinowich, Stephanie C Hicks
The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics. eLife 12 (2024)
Lukas M Weber, Arkajyoti Saha, Abhirup Datta, Kaspar D Hansen, Stephanie C Hicks
nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes. Nature communications 14 (1) (2023)
Lukas M Weber, Ariel A Hippen, Peter F Hickey, Kristofer C Berrett, Jason Gertz, Jennifer Anne Doherty, Casey S Greene, Stephanie C Hicks
Genetic demultiplexing of pooled single-cell RNA-sequencing samples in cancer facilitates effective experimental design. GigaScience 10 (9) (2022)
Mauro Petrillo, Marco Fabbri, Dafni Maria Kagkli, Maddalena Querci, Guy Van den Eede, Erik Alm, Derya Aytan-Aktug, Salvador Capella, Catherine D Carrillo, Alessandro Cestaro, Kok Gan Chan, Teresa Coque, Christoph Endrullat, Ivo Gut, Paul Hammer, Gemma L Kay, Jean-Yves Madec, Alison E Mather, Alice Carolyn McHardy, Thierry Naas, Valentina Paracchini, Silke Peter, Arthur Pightling, Barbara Raffael, John W A Rossen, Etienne Ruppé, Robert Schlaberg, Kevin Vanneste, Lukas M Weber, Henrik Westh, Alexandre Angers-Loustau
A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing. F1000Research 10 (2021)
Ariel A Hippen, Matias M Falco, Lukas M Weber, Erdogan Pekcan Erkan, Kaiyang Zhang, Jennifer Anne Doherty, Anna Vaharautio, Casey S Greene, Stephanie C Hicks
miQC: An adaptive probabilistic framework for quality control of single-cell RNA-sequencing data. PLoS computational biology 17 (8) (2021)
Mauro Petrillo, Marco Fabbri, Dafni Maria Kagkli, Maddalena Querci, Guy Van den Eede, Erik Alm, Derya Aytan-Aktug, Salvador Capella, Catherine D Carrillo, Alessandro Cestaro, Kok Gan Chan, Teresa Coque, Christoph Endrullat, Ivo Gut, Paul Hammer, Gemma L Kay, Jean-Yves Madec, Alison E Mather, Alice Carolyn McHardy, Thierry Naas, Valentina Paracchini, Silke Peter, Arthur Pightling, Barbara Raffael, John W A Rossen, Etienne Ruppé, Robert Schlaberg, Kevin Vanneste, Lukas M Weber, Henrik Westh, Alexandre Angers-Loustau
A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing. F1000Research 10 (2021)
Thomas Liechti, Lukas M Weber, Thomas Myles Ashhurst, Natalie Stanley, Martin Prlic, Sofie Van Gassen, Florian Mair
An updated guide for the perplexed: cytometry in the high-dimensional era. Nature immunology 22 (10) (2021)
Lukas M Weber, Malgorzata Nowicka, Charlotte Soneson, Mark D Robinson
diffcyt: Differential discovery in high-dimensional cytometry via high-resolution clustering. Communications biology 2 (2019)
Lukas M Weber, Charlotte Soneson
HDCytoData: Collection of high-dimensional cytometry benchmark datasets in Bioconductor object formats. F1000Research 8 (2019)
Carsten Krieg, Malgorzata Nowicka, Silvia Guglietta, Sabrina Schindler, Felix J Hartmann, Lukas M Weber, Reinhard Dummer, Mark D Robinson, Mitchell Paul Levesque, Burkhard Becher
High-dimensional single-cell analysis predicts response to anti-PD-1 immunotherapy. Nature medicine 24 (2) (2018)
Malgorzata Nowicka, Carsten Krieg, Lukas M Weber, Felix J Hartmann, Silvia Guglietta, Burkhard Becher, Mitchell P Levesque, Mark D Robinson
CyTOF workflow: differential discovery in high-throughput high-dimensional cytometry datasets. F1000Research (2017)
Felix J Hartmann, Raphael Bernard-Valnet, Clémence Quériault, Dunja Mrjden, Lukas M Weber, Edoardo Galli, Carsten Krieg, Mark D Robinson, Xuan-Hung Nguyen, Yves Dauvilliers, Roland S Liblau, Burkhard Becher
High-dimensional single-cell analysis reveals the immune signature of narcolepsy. The Journal of experimental medicine 213 (12) (2016)
Alexa Burger, Helen Lindsay, Anastasia Felker, Christopher Hess, Carolin Anders, Elena Chiavacci, Jonas Zaugg, Lukas M Weber, Raul Catena, Martin Jinek, Mark D Robinson, Christian Mosimann
Maximizing mutagenesis with solubilized CRISPR-Cas9 ribonucleoprotein complexes. Development (Cambridge, England) 143 (11) (2016)

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Publication Activity (10 Years)

Top Topics

Top Venues

Lukas M Weber