Jörn Kalinowski

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 51

Top Topics

Escherichia Coli

Chronic Lymphocytic Leukemia

Gene Expression

Top Venues

FEMS microbiology ecology

Nucleic acids research

This page only lists publications with an associated author ORCID identifier.

Publications

Laura Schlüter, Tobias Busche, Laila Bondzio, Andreas Hütten, Karsten Niehaus, Susanne Schneiker-Bekel, Alfred Pühler, Jörn Kalinowski
Sigma Factor Engineering in Actinoplanes sp. SE50/110: Expression of the Alternative Sigma Factor Gene ACSP50_0507 (σH As ) Enhances Acarbose Yield and Alters Cell Morphology. Microorganisms 12 (6) (2024)
Fede Berckx, Daniel Wibberg, Andreas Brachmann, Ciara Morrison, Nadia Binte Obaid, Jochen Blom, Jörn Kalinowski, Luis Gabriel Wall, Katharina Pawlowski
Genome analysis and biogeographic distribution of the earliest divergent Frankia clade in the southern hemisphere. FEMS microbiology ecology (2024)
Brittan S Scales, Christiane Hassenrück, Lynn Moldaenke, Julia Hassa, Christian Rückert, Christoph Rummel, Corinna Völkner, Robby Rynek, Tobias Busche, Jörn Kalinowski, Annika Jahnke, Mechthild Schmitt-Jansen, Katrin Wendt-Potthoff, Sonja Oberbeckmann
Hunting for pigments in bacterial settlers of the Great Pacific Garbage Patch. Environmental microbiology 26 (6) (2024)
Fede Berckx, Daniel Wibberg, Andreas Brachmann, Ciara Morrison, Nadia B Obaid, Jochen Blom, Jörn Kalinowski, Luis Gabriel Wall, Katharina Pawlowski
Genome analysis and biogeographic distribution of the earliest divergent Frankia clade in the southern hemisphere. FEMS microbiology ecology 100 (5) (2024)
Fede Berckx, Daniel Wibberg, Andreas Brachmann, Ciara Morrison, Nadia B Obaid, Jochen Blom, Jörn Kalinowski, Luis Gabriel Wall, Katharina Pawlowski
Genome analysis and biogeographic distribution of the earliest divergent Frankia clade in the southern hemisphere. FEMS microbiology ecology 100 (5) (2024)
Nicole Schmid, David Brandt, Claudia Walasek, Clara Rolland, Johannes Wittmann, Dorian Fischer, Mathias Müsken, Jörn Kalinowski, Kai M Thormann
An autonomous plasmid as an inovirus phage satellite. Applied and environmental microbiology 90 (5) (2024)
Fede Berckx, Daniel Wibberg, Andreas Brachmann, Ciara Morrison, Nadia B Obaid, Jochen Blom, Jörn Kalinowski, Luis Gabriel Wall, Katharina Pawlowski
Genome analysis and biogeographic distribution of the earliest divergent Frankia clade in the southern hemisphere. FEMS microbiology ecology 100 (5) (2024)
Brittan S Scales, Christiane Hassenrück, Lynn Moldaenke, Julia Hassa, Christian Rückert, Christoph Rummel, Corinna Völkner, Robby Rynek, Tobias Busche, Jörn Kalinowski, Annika Jahnke, Mechthild Schmitt-Jansen, Katrin Wendt-Potthoff, Sonja Oberbeckmann
Hunting for pigments in bacterial settlers of the Great Pacific Garbage Patch. Environmental microbiology 26 (6) (2024)
Fede Berckx, Daniel Wibberg, Andreas Brachmann, Ciara Morrison, Nadia B Obaid, Jochen Blom, Jörn Kalinowski, Luis Gabriel Wall, Katharina Pawlowski
Genome analysis and biogeographic distribution of the earliest divergent Frankia clade in the southern hemisphere. FEMS microbiology ecology 100 (5) (2024)
Laura Schlüter, Tobias Busche, Laila Bondzio, Andreas Hütten, Karsten Niehaus, Susanne Schneiker-Bekel, Alfred Pühler, Jörn Kalinowski
Sigma Factor Engineering in Actinoplanes sp. SE50/110: Expression of the Alternative Sigma Factor Gene ACSP50_0507 (σH As ) Enhances Acarbose Yield and Alters Cell Morphology. Microorganisms 12 (6) (2024)
Camilla März, Sophia Nölting, Lars Wollenschläger, Alfred Pühler, Jörn Kalinowski
Role of MalQ Enzyme in a Reconstructed Maltose/Maltodextrin Pathway in Actinoplanes sp. SE50/110. Microorganisms 12 (6) (2024)
Nicole Schmid, David Brandt, Claudia Walasek, Clara Rolland, Johannes Wittmann, Dorian Fischer, Mathias Müsken, Jörn Kalinowski, Kai M Thormann
An autonomous plasmid as an inovirus phage satellite. Applied and environmental microbiology (2024)
Camilla März, Sophia Nölting, Lars Wollenschläger, Alfred Pühler, Jörn Kalinowski
Role of MalQ Enzyme in a Reconstructed Maltose/Maltodextrin Pathway in Actinoplanes sp. SE50/110. Microorganisms 12 (6) (2024)
Nicole Schmid, David Brandt, Claudia Walasek, Clara Rolland, Johannes Wittmann, Dorian Fischer, Mathias Müsken, Jörn Kalinowski, Kai M Thormann
An autonomous plasmid as an inovirus phage satellite. Applied and environmental microbiology 90 (5) (2024)
Nicole Schmid, David Brandt, Claudia Walasek, Clara Rolland, Johannes Wittmann, Dorian Fischer, Mathias Müsken, Jörn Kalinowski, Kai M Thormann
An autonomous plasmid as an inovirus phage satellite. Applied and environmental microbiology 90 (5) (2024)
Daniel Siebert, Tobias Busche, Ezgi Saydam, Jörn Kalinowski, Christian Rückert-Reed, Bastian Blombach
Complete Genome Sequence of the Carboxydotrophic Knallgas Bacterium Pseudomonas carboxydohydrogena Strain DSM 1083. Microbiology resource announcements (2023)
Anna Behle, Maximilian Dietsch, Louis Goldschmidt, Wandana Murugathas, Lutz C Berwanger, Jonas Burmester, Lun Yao, David Brandt, Tobias Busche, Jörn Kalinowski, Elton Paul Hudson, Oliver Ebenhöh, Ilka M Axmann, Rainer Machné
Manipulation of topoisomerase expression inhibits cell division but not growth and reveals a distinctive promoter structure in Synechocystis. Nucleic acids research 50 (22) (2023)
Sophia Nölting, Camilla März, Lucas Jacob, Marcus Persicke, Susanne Schneiker-Bekel, Jörn Kalinowski
The 4-α-Glucanotransferase AcbQ Is Involved in Acarbose Modification in Actinoplanes sp. SE50/110. Microorganisms 11 (4) (2023)
Anna Behle, Maximilian Dietsch, Louis Goldschmidt, Wandana Murugathas, Lutz C Berwanger, Jonas Burmester, Lun Yao, David Brandt, Tobias Busche, Jörn Kalinowski, Elton Paul Hudson, Oliver Ebenhöh, Ilka M Axmann, Rainer Machné
Manipulation of topoisomerase expression inhibits cell division but not growth and reveals a distinctive promoter structure in Synechocystis. Nucleic acids research 50 (22) (2023)
Pascal Schmidt, David Brandt, Tobias Busche, Jörn Kalinowski
Characterization of Bacterial Transcriptional Regulatory Networks in Escherichia coli through Genome-Wide In Vitro Run-Off Transcription/RNA-seq (ROSE). Microorganisms 11 (6) (2023)
Simone Kann, Gustavo Concha, Felix Weinreich, Andreas Hahn, Christian Rückert, Jörn Kalinowski, Olfert Landt, Hagen Frickmann
Comparative Assessment of Two Commercial Real-Time PCR Assays for the Diagnosis of Trypanosoma cruzi DNA in Serum. Microorganisms 11 (4) (2023)
Sophia Nölting, Camilla März, Lucas Jacob, Marcus Persicke, Susanne Schneiker-Bekel, Jörn Kalinowski
The 4-α-Glucanotransferase AcbQ Is Involved in Acarbose Modification in Actinoplanes sp. SE50/110. Microorganisms 11 (4) (2023)
Anna Behle, Maximilian Dietsch, Louis Goldschmidt, Wandana Murugathas, Lutz C Berwanger, Jonas Burmester, Lun Yao, David Brandt, Tobias Busche, Jörn Kalinowski, Elton Paul Hudson, Oliver Ebenhöh, Ilka M Axmann, Rainer Machné
Manipulation of topoisomerase expression inhibits cell division but not growth and reveals a distinctive promoter structure in Synechocystis. Nucleic acids research 50 (22) (2023)
Simone Kann, Gustavo Concha, Felix Weinreich, Andreas Hahn, Christian Rückert, Jörn Kalinowski, Olfert Landt, Hagen Frickmann
Comparative Assessment of Two Commercial Real-Time PCR Assays for the Diagnosis of Trypanosoma cruzi DNA in Serum. Microorganisms 11 (4) (2023)
Pascal Schmidt, David Brandt, Tobias Busche, Jörn Kalinowski
Characterization of Bacterial Transcriptional Regulatory Networks in Escherichia coli through Genome-Wide In Vitro Run-Off Transcription/RNA-seq (ROSE). Microorganisms 11 (6) (2023)
Simone Kann, Gustavo Concha, Felix Weinreich, Andreas Hahn, Christian Rückert, Jörn Kalinowski, Olfert Landt, Hagen Frickmann
Comparative Assessment of Two Commercial Real-Time PCR Assays for the Diagnosis of Trypanosoma cruzi DNA in Serum. Microorganisms 11 (4) (2023)
Sophia Nölting, Camilla März, Lucas Jacob, Marcus Persicke, Susanne Schneiker-Bekel, Jörn Kalinowski
The 4-α-Glucanotransferase AcbQ Is Involved in Acarbose Modification in Actinoplanes sp. SE50/110. Microorganisms 11 (4) (2023)
Leonie Sagurna, Sascha Heinrich, Lara-Sophie Kaufmann, Christian Rückert, Tobias Busche, Alexander Wolf, Jan Eickhoff, Bert Klebl, Jörn Kalinowski, Julia E Bandow
Characterization of the Antibacterial Activity of Quinone-Based Compounds Originating from the Alnumycin Biosynthetic Gene Cluster of a Streptomyces Isolate. Antibiotics (Basel, Switzerland) 12 (7) (2023)
Sophia Nölting, Camilla März, Lucas Jacob, Marcus Persicke, Susanne Schneiker-Bekel, Jörn Kalinowski
The 4-α-Glucanotransferase AcbQ Is Involved in Acarbose Modification in Actinoplanes sp. SE50/110. Microorganisms 11 (4) (2023)
Fazlin Pheiffer, Yannik K-H Schneider, Espen Holst Hansen, Jeanette Hammer Andersen, Johan Isaksson, Tobias Busche, Christian Rückert, Jörn Kalinowski, Leonardo Joaquim van Zyl, Marla Trindade
Bioassay-Guided Fractionation Leads to the Detection of Cholic Acid Generated by the Rare Thalassomonas sp. Marine drugs 21 (1) (2022)
Fazlin Pheiffer, Yannik K-H Schneider, Espen Holst Hansen, Jeanette Hammer Andersen, Johan Isaksson, Tobias Busche, Christian Rückert, Jörn Kalinowski, Leonardo Joaquim van Zyl, Marla Trindade
Bioassay-Guided Fractionation Leads to the Detection of Cholic Acid Generated by the Rare Thalassomonas sp. Marine drugs 21 (1) (2022)
Carsten Hain, Rudolf Stadler, Jörn Kalinowski
Unraveling the Structural Variations of Early-Stage Mycosis Fungoides-CD3 Based Purification and Third Generation Sequencing as Novel Tools for the Genomic Landscape in CTCL. Cancers 14 (18) (2022)
Franziska Handel, Andreas Kulik, Katharina W Wex, Anne Berscheid, Julian S Saur, Anika Winkler, Daniel Wibberg, Jörn Kalinowski, Heike Brötz-Oesterhelt, Yvonne Mast
Ψ-Footprinting approach for the identification of protein synthesis inhibitor producers. NAR genomics and bioinformatics 4 (3) (2022)
Anna Behle, Maximilian Dietsch, Louis Goldschmidt, Wandana Murugathas, Lutz C Berwanger, Jonas Burmester, Lun Yao, David Brandt, Tobias Busche, Jörn Kalinowski, Elton Paul Hudson, Oliver Ebenhöh, Ilka M Axmann, Rainer Machné
Manipulation of topoisomerase expression inhibits cell division but not growth and reveals a distinctive promoter structure in Synechocystis. Nucleic acids research (2022)
Fazlin Pheiffer, Yannik K-H Schneider, Espen Holst Hansen, Jeanette Hammer Andersen, Johan Isaksson, Tobias Busche, Christian Rückert, Jörn Kalinowski, Leonardo Joaquim van Zyl, Marla Trindade
Bioassay-Guided Fractionation Leads to the Detection of Cholic Acid Generated by the Rare Thalassomonas sp. Marine drugs 21 (1) (2022)
Fazlin Pheiffer, Yannik K-H Schneider, Espen Holst Hansen, Jeanette Hammer Andersen, Johan Isaksson, Tobias Busche, Christian Rückert, Jörn Kalinowski, Leonardo Joaquim van Zyl, Marla Trindade
Bioassay-Guided Fractionation Leads to the Detection of Cholic Acid Generated by the Rare Thalassomonas sp. Marine drugs 21 (1) (2022)
Rahmi Lale, Lisa Tietze, Maxime Fages-Lartaud, Jenny Nesje, Ingerid Onsager, Kerstin Engelhardt, Che Fai Alex Wong, Madina Akan, Niklas Hummel, Jörn Kalinowski, Christian Rückert, Martin Frank Hohmann-Marriott
A universal approach to gene expression engineering. Synthetic biology (Oxford, England) 7 (1) (2022)
Verena Nadin Fritsch, Nico Linzner, Tobias Busche, Nelly Said, Christoph Weise, Jörn Kalinowski, Markus C Wahl, Haike Antelmann
The MerR-family regulator NmlR is involved in the defense against oxidative stress in Streptococcus pneumoniae. Molecular microbiology (2022)
Erik Mingyar, Lucas Mühling, Andreas Kulik, Anika Winkler, Daniel Wibberg, Jörn Kalinowski, Kai Blin, Tilmann Weber, Wolfgang Wohlleben, Evi Stegmann
A Regulator Based "Semi-Targeted" Approach to Activate Silent Biosynthetic Gene Clusters. International journal of molecular sciences 22 (14) (2021)
Olga N Sekurova, Yi-Qian Sun, Martin Zehl, Christian Rückert, Anna Stich, Tobias Busche, Jörn Kalinowski, Sergey B Zotchev
Coupling of the engineered DNA "mutator" to a biosensor as a new paradigm for activation of silent biosynthetic gene clusters in Streptomyces. Nucleic acids research 49 (14) (2021)
Tobias Luttermann, Christian Rückert, Daniel Wibberg, Tobias Busche, Jan-Philipp Schwarzhans, Karl Friehs, Jörn Kalinowski
Establishment of a near-contiguous genome sequence of the citric acid producing yeast Yarrowia lipolytica DSM 3286 with resolution of rDNA clusters and telomeres. NAR genomics and bioinformatics 3 (4) (2021)
Marina V Dziuba, Cornelius N Riese, Lion Borgert, Manuel Wittchen, Tobias Busche, Jörn Kalinowski, René Uebe, Dirk Schüler
The Complex Transcriptional Landscape of Magnetosome Gene Clusters in Magnetospirillum gryphiswaldense. mSystems 6 (5) (2021)
Julian Droste, Vera Ortseifen, Lena Schaffert, Marcus Persicke, Susanne Schneiker-Bekel, Alfred Pühler, Jörn Kalinowski
The expression of the acarbose biosynthesis gene cluster in Actinoplanes sp. SE50/110 is dependent on the growth phase. BMC genomics 21 (1) (2020)
Johannes Hemmerich, Mohamed Labib, Carmen Steffens, Sebastian J Reich, Marc Weiske, Meike Baumgart, Christian Rückert, Matthias Ruwe, Daniel Siebert, Volker F Wendisch, Jörn Kalinowski, Wolfgang Wiechert, Marko Oldiges
Screening of a genome-reduced Corynebacterium glutamicum strain library for improved heterologous cutinase secretion. Microbial biotechnology 13 (6) (2020)
Dong-Song Tian, Eric Kuhnert, Jamal Ouazzani, Daniel Wibberg, Jörn Kalinowski, Russell J Cox
The sporothriolides. A new biosynthetic family of fungal secondary metabolites. Chemical science 11 (46) (2020)
Martin Kuhl, Lars Gläser, Yuriy Rebets, Christian Rückert, Namrata Sarkar, Thomas Hartsch, Jörn Kalinowski, Andriy Luzhetskyy, Christoph Wittmann
Microparticles globally reprogram Streptomyces albus toward accelerated morphogenesis, streamlined carbon core metabolism, and enhanced production of the antituberculosis polyketide pamamycin. Biotechnology and bioengineering 117 (12) (2020)
Marco T Radukic, David Brandt, Markus Haak, Kristian M Müller, Jörn Kalinowski
Nanopore sequencing of native adeno-associated virus (AAV) single-stranded DNA using a transposase-based rapid protocol. NAR genomics and bioinformatics 2 (4) (2020)
Carsten Schotte, Lei Li, Daniel Wibberg, Jörn Kalinowski, Russell J Cox
Synthetic Biology Driven Biosynthesis of Unnatural Tropolone Sesquiterpenoids. Angewandte Chemie (International ed. in English) 59 (52) (2020)
Lena Schaffert, Camilla März, Lisa Burkhardt, Julian Droste, David Brandt, Tobias Busche, Winfried Rosen, Susanne Schneiker-Bekel, Marcus Persicke, Alfred Pühler, Jörn Kalinowski
Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110. Microbial cell factories 18 (1) (2019)
Alexandra Baulig, Irina Helmle, Marius Bader, Felix Wolf, Andreas Kulik, Arwa Al-Dilaimi, Daniel Wibberg, Jörn Kalinowski, Harald Gross, Leonard Kaysser
Biosynthetic reconstitution of deoxysugar phosphoramidate metalloprotease inhibitors using an N-P-bond-forming kinase. Chemical science 10 (16) (2019)
Emily Humble, Kanchon K Dasmahapatra, Alvaro Martinez-Barrio, Inês Gregório, Jaume Forcada, Ann-Christin Polikeit, Simon D Goldsworthy, Michael E Goebel, Jörn Kalinowski, Jochen B W Wolf, Joseph Ivan Hoffman
RAD Sequencing and a Hybrid Antarctic Fur Seal Genome Assembly Reveal Rapidly Decaying Linkage Disequilibrium, Global Population Structure and Evidence for Inbreeding. G3 (Bethesda, Md.) 8 (8) (2018)