Juan M Vaquerizas

Scopus Author ID ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 21

Top Venues

Nature communications

Nature genetics

Genome research

Nature cell biology

Max-Planck-Institut für molekulare Biomedizin

Centro Nacional de Investigaciones Oncológicas (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Max-Planck-Institut für molekulare Biomedizin Oct 01 2012

Germany

Max Planck Research Group Leader

European Bioinformatics Institute

United Kingdom

Postdoctoral research fellow :: Luscombe Group

Wolfson College

United Kingdom

Junior Research Fellow

Education History

Centro Nacional de Investigaciones Oncológicas

Spain

PHD

Publications

Roger Mulet-Lazaro, Stanley van Herk, Margit Nuetzel, Aniko Sijs-Szabo, Noelia Díaz, Katherine Kelly, Claudia A J Erpelinck-Verschueren, Lucia Schwarzfischer-Pfeilschifter, Hanna Stanewsky, Ute Ackermann, Dagmar Glatz, Johanna Raithel, Alexander Fischer, Sandra Pohl, Anita Rijneveld, Juan M Vaquerizas, Christian Thiede, Christoph Plass, Bas J Wouters, H Ruud Delwel, Michael Rehli, Claudia Gebhard
Epigenetic alterations affecting hematopoietic regulatory networks as drivers of mixed myeloid/lymphoid leukemia. Nature communications 15 (1) (2024)
Roger Mulet-Lazaro, Stanley van Herk, Margit Nuetzel, Aniko Sijs-Szabo, Noelia Díaz, Katherine Kelly, Claudia A J Erpelinck-Verschueren, Lucia Schwarzfischer-Pfeilschifter, Hanna Stanewsky, Ute Ackermann, Dagmar Glatz, Johanna Raithel, Alexander Fischer, Sandra Pohl, Anita Rijneveld, Juan M Vaquerizas, Christian Thiede, Christoph Plass, Bas J Wouters, H Ruud Delwel, Michael Rehli, Claudia Gebhard
Epigenetic alterations affecting hematopoietic regulatory networks as drivers of mixed myeloid/lymphoid leukemia. Nature communications 15 (1) (2024)
Roger Mulet-Lazaro, Stanley van Herk, Margit Nuetzel, Aniko Sijs-Szabo, Noelia Díaz, Katherine Kelly, Claudia A J Erpelinck-Verschueren, Lucia Schwarzfischer-Pfeilschifter, Hanna Stanewsky, Ute Ackermann, Dagmar Glatz, Johanna Raithel, Alexander Fischer, Sandra Pohl, Anita Rijneveld, Juan M Vaquerizas, Christian Thiede, Christoph Plass, Bas J Wouters, H Ruud Delwel, Michael Rehli, Claudia Gebhard
Epigenetic alterations affecting hematopoietic regulatory networks as drivers of mixed myeloid/lymphoid leukemia. Nature communications 15 (1) (2024)
Elizabeth Ing-Simmons, Nick Machnik, Juan M Vaquerizas
Reply to: Revisiting the use of structural similarity index in Hi-C. Nature genetics (2023)
Binyamin Duethorn, Fabian Groll, Bettina Rieger, Hannes C A Drexler, Heike Brinkmann, Ludmila Kremer, Martin Stehling, Marie-Theres Borowski, Karina Mildner, Dagmar Zeuschner, Magdalena Zernicka Goetz, Marc P Stemmler, Karin B Busch, Juan M Vaquerizas, Ivan Bedzhov
Lima1 mediates the pluripotency control of membrane dynamics and cellular metabolism. Nature communications 13 (1) (2022)
Anusha Sathyanarayanan, Elizabeth Ing-Simmons, Rui Chen, Hyun-Woo Jeong, Hatice O Ozguldez, Rui Fan, Binyamin Duethorn, Kee-Pyo Kim, Yung Su Kim, Martin Stehling, Heike Brinkmann, Hans Robert Schöler, Ralf H Adams, Juan M Vaquerizas, Ivan Bedzhov
Early developmental plasticity enables the induction of an intermediate extraembryonic cell state. Science advances 8 (44) (2022)
Damir Baranasic, Matthias Hörtenhuber, Piotr J Balwierz, Tobias Zehnder, Abdul Kadir Mukarram, Chirag Nepal, Csilla Varnai, Yavor Hadzhiev, Ada Jimenez Gonzalez, Nan Li, Joseph Wragg, Fabio M D'Orazio, Dorde Relic, Mikhail Pachkov, Noelia Díaz, Benjamín Hernández-Rodríguez, Zelin Chen, Marcus Stoiber, Michael X Dong, Irene Stevens, Samuel E Ross, Anne Eagle, Ryan Martin, Oluwapelumi Obasaju, Sepand Rastegar, Alison C McGarvey, Wolfgang Kopp, Emily V Chambers, Dennis Wang, Hyejeong R Kim, Rafael D Acemel, Silvia Naranjo, Maciej Łapiński, Vanessa Chong-Morrison, Sinnakaruppan Mathavan, Bernard Peers, Tatjana Sauka-Spengler, Martin Vingron, Piero Carnici, Uwe Ohler, Scott Allen Lacadie, Jason W Sinclair, Cecilia Lanny Winata, Fredericus J M van Eeden, Juan M Vaquerizas, José Luis Gómez-Skarmeta, Daria Onichtchouk, Ben James Brown, Ozren Bogdanovic, Erik van Nimwegen, Monte Westerfield, Fiona C Wardle, Carsten O Daub, Boris Lenhard, Ferenc Müller
Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements. Nature genetics 54 (7) (2022)
Ni-Chen Chang, Quirze Rovira, Jonathan N Wells, Cédric Feschotte, Juan M Vaquerizas
Zebrafish transposable elements show extensive diversification in age, genomic distribution, and developmental expression. Genome research 32 (7) (2022)
Candice L Wike, Yixuan Guo, Mengyao Tan, Ryohei Nakamura, Dana Klatt Shaw, Noelia Díaz, Aneasha F Whittaker-Tademy, Neva C Durand, Erez Lieberman Aiden, Juan M Vaquerizas, David Grunwald, Hiroyuki Takeda, Bradley R Cairns
Chromatin architecture transitions from zebrafish sperm through early embryogenesis. Genome research 31 (6) (2021)
Elizabeth Ing-Simmons, Roshan Vaid, Xin Yang Bing, Michael Levine, Mattias Mannervik, Juan M Vaquerizas
Independence of chromatin conformation and gene regulation during Drosophila dorsoventral patterning. Nature genetics 53 (4) (2021)
Kirill Salewskij, Theresa Gross-Thebing, Elizabeth Ing-Simmons, Binyamin Duethorn, Bettina Rieger, Rui Fan, Chuanying Pan, Niraimathi Govindasamy, Heike Brinkmann, Ludmila Kremer, Nannette Kuempel-Rink, Karina Mildner, Dagmar Zeuschner, Martin Stehling, Marion Dejosez, Thomas P Zwaka, Hans Robert Schöler, Karin B Busch, Juan M Vaquerizas, Ivan Bedzhov
Ronin governs the metabolic capacity of the embryonic lineage for post-implantation development. EMBO reports 22 (11) (2021)
Silvia Galan, Nick Machnik, Kai Kruse, Noelia Díaz, Marc A Marti-Renom, Juan M Vaquerizas
CHESS enables quantitative comparison of chromatin contact data and automatic feature extraction. Nature genetics 52 (11) (2020)
Kai Kruse, Clemens B Hug, Juan M Vaquerizas
FAN-C: a feature-rich framework for the analysis and visualisation of chromosome conformation capture data. Genome biology 21 (1) (2020)
Adam Burton, Vincent Brochard, Carmen Galan, Elias R Ruiz-Morales, Quirze Rovira, Diego Rodriguez-Terrones, Kai Kruse, Stéphanie Le Gras, Vishnu S Udayakumar, Hang Gyeong Chin, André Eid, Xiaoyu Liu, Chenfei Wang, Shao-Rong Gao, Sriharsa Pradhan, Juan M Vaquerizas, Nathalie Beaujean, Thomas Jenuwein, Maria-Elena Torres-Padilla
Heterochromatin establishment during early mammalian development is regulated by pericentromeric RNA and characterized by non-repressive H3K9me3. Nature cell biology 22 (7) (2020)
Guillermo Luxán, Jonas Stewen, Noelia Díaz, Katsuhiro Kato, Sathish K Maney, Anusha Aravamudhan, Frank Berkenfeld, Nina Nagelmann, Hannes Ca Drexler, Dagmar Zeuschner, Cornelius Faber, Hermann Schillers, Sven Hermann, John Wiseman, Juan M Vaquerizas, Mara E Pitulescu, Ralf H Adams
Endothelial EphB4 maintains vascular integrity and transport function in adult heart. eLife 8 (2019)
Elizabeth Ing-Simmons, Juan M Vaquerizas
Visualising three-dimensional genome organisation in two dimensions. Development (Cambridge, England) 146 (19) (2019)
Moushami Mallik, Marica Catinozzi, Clemens B Hug, Li Zhang, Marina Wagner, Julia Bussmann, Jonas Bittern, Sina Mersmann, Christian Klämbt, Hannes C A Drexler, Martijn A Huynen, Juan M Vaquerizas, Erik Storkebaum
Xrp1 genetically interacts with the ALS-associated FUS orthologue caz and mediates its toxicity. The Journal of cell biology 217 (11) (2018)
Noelia Díaz, Kai Kruse, Tabea Erdmann, Annette M Staiger, German Ott, Georg Lenz, Juan M Vaquerizas
Chromatin conformation analysis of primary patient tissue using a low input Hi-C method. Nature communications 9 (1) (2018)
Urs H Langen, Mara E Pitulescu, Jung Mo Kim, Rocio Enriquez-Gasca, Kishor K Sivaraj, Anjali P Kusumbe, Amit Singh, Jacopo Di Russo, M Gabriele Bixel, Bin Zhou, Lydia Sorokin, Juan M Vaquerizas, Ralf H Adams
Cell-matrix signals specify bone endothelial cells during developmental osteogenesis. Nature cell biology 19 (3) (2017)
Hyun-Woo Jeong, Benjamín Hernández-Rodríguez, JungMo Kim, Kee-Pyo Kim, Rocio Enriquez-Gasca, Juyong Yoon, Susanne Adams, Hans Robert Schöler, Juan M Vaquerizas, Ralf H Adams
Transcriptional regulation of endothelial cell behavior during sprouting angiogenesis. Nature communications 8 (1) (2017)
Diego Rodriguez-Terrones, Xavier Gaume, Takashi Ishiuchi, Amélie Weiss, Arnaud Kopp, Kai Kruse, Audrey Penning, Juan M Vaquerizas, Laurent Brino, Maria-Elena Torres-Padilla
A molecular roadmap for the emergence of early-embryonic-like cells in culture. Nature genetics 50 (1) (2017)

Juan M Vaquerizas.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Juan M Vaquerizas