Julia Chamot-Rooke

ResearcherID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 37

Top Topics

Mass Spectrometry

Multiple Myeloma

Gas Chromatography

Top Venues

Nature communications

Analytical chemistry

Journal of the American Society for Mass Spectrometry

Communications biology

This page only lists publications with an associated author ORCID identifier.

Publications

David Fernandez-Martinez, Youxin Kong, Sylvie Goussard, Agustin Zavala, Pauline Gastineau, Martial Rey, Gabriel Ayme, Julia Chamot-Rooke, Pierre LaFaye, Matthijn Vos, Ariel Mechaly, Guillaume Duménil
Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms. Nature communications 15 (1) (2024)
David Fernandez-Martinez, Youxin Kong, Sylvie Goussard, Agustin Zavala, Pauline Gastineau, Martial Rey, Gabriel Ayme, Julia Chamot-Rooke, Pierre LaFaye, Matthijn Vos, Ariel Mechaly, Guillaume Duménil
Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms. Nature communications 15 (1) (2024)
Lucienne Nouchikian, David Fernandez-Martinez, Pierre-Yves Renard, Cyrille Sabot, Guillaume Duménil, Martial Rey, Julia Chamot-Rooke
Do Not Waste Time─Ensure Success in Your Cross-Linking Mass Spectrometry Experiments before You Begin. Analytical chemistry 96 (6) (2024)
Lucienne Nouchikian, David Fernandez-Martinez, Pierre-Yves Renard, Cyrille Sabot, Guillaume Duménil, Martial Rey, Julia Chamot-Rooke
Do Not Waste Time─Ensure Success in Your Cross-Linking Mass Spectrometry Experiments before You Begin. Analytical chemistry 96 (6) (2024)
David Fernandez-Martinez, Youxin Kong, Sylvie Goussard, Agustin Zavala, Pauline Gastineau, Martial Rey, Gabriel Ayme, Julia Chamot-Rooke, Pierre LaFaye, Matthijn Vos, Ariel Mechaly, Guillaume Duménil
Publisher Correction: Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms. Nature communications 15 (1) (2024)
David Fernandez-Martinez, Youxin Kong, Sylvie Goussard, Agustin Zavala, Pauline Gastineau, Martial Rey, Gabriel Ayme, Julia Chamot-Rooke, Pierre LaFaye, Matthijn Vos, Ariel Mechaly, Guillaume Duménil
Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms. Nature communications 15 (1) (2024)
Yaroslav Lyutvinskiy, Konstantin O Nagornov, Anton N Kozhinov, Natalia Gasilova, Laure Menin, Zhaowei Meng, Xuepei Zhang, Amir Ata Saei, Tingting Fu, Julia Chamot-Rooke, Yury O Tsybin, Alexander A Makarov, Roman A Zubarev
Adding Color to Mass Spectra of Biopolymers: Charge Determination Analysis (CHARDA) Assigns Charge State to Every Ion Peak. Journal of the American Society for Mass Spectrometry 35 (5) (2024)
Yaroslav Lyutvinskiy, Konstantin O Nagornov, Anton N Kozhinov, Natalia Gasilova, Laure Menin, Zhaowei Meng, Xuepei Zhang, Amir Ata Saei, Tingting Fu, Julia Chamot-Rooke, Yury O Tsybin, Alexander A Makarov, Roman A Zubarev
Adding Color to Mass Spectra of Biopolymers: Charge Determination Analysis (CHARDA) Assigns Charge State to Every Ion Peak. Journal of the American Society for Mass Spectrometry 35 (5) (2024)
Lucienne Nouchikian, David Fernandez-Martinez, Pierre-Yves Renard, Cyrille Sabot, Guillaume Duménil, Martial Rey, Julia Chamot-Rooke
Do Not Waste Time─Ensure Success in Your Cross-Linking Mass Spectrometry Experiments before You Begin. Analytical chemistry (2024)
David Fernandez-Martinez, Youxin Kong, Sylvie Goussard, Agustin Zavala, Pauline Gastineau, Martial Rey, Gabriel Ayme, Julia Chamot-Rooke, Pierre LaFaye, Matthijn Vos, Ariel Mechaly, Guillaume Duménil
Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms. Nature communications 15 (1) (2024)
Lucienne Nouchikian, David Fernandez-Martinez, Pierre-Yves Renard, Cyrille Sabot, Guillaume Duménil, Martial Rey, Julia Chamot-Rooke
Do Not Waste Time─Ensure Success in Your Cross-Linking Mass Spectrometry Experiments before You Begin. Analytical chemistry 96 (6) (2024)
Lucienne Nouchikian, David Fernandez-Martinez, Pierre-Yves Renard, Cyrille Sabot, Guillaume Duménil, Martial Rey, Julia Chamot-Rooke
Do Not Waste Time─Ensure Success in Your Cross-Linking Mass Spectrometry Experiments before You Begin. Analytical chemistry 96 (6) (2024)
Lucienne Nouchikian, David Fernandez-Martinez, Pierre-Yves Renard, Cyrille Sabot, Guillaume Duménil, Martial Rey, Julia Chamot-Rooke
Do Not Waste Time─Ensure Success in Your Cross-Linking Mass Spectrometry Experiments before You Begin. Analytical chemistry 96 (6) (2024)
David Fernandez-Martinez, Youxin Kong, Sylvie Goussard, Agustin Zavala, Pauline Gastineau, Martial Rey, Gabriel Ayme, Julia Chamot-Rooke, Pierre LaFaye, Matthijn Vos, Ariel Mechaly, Guillaume Duménil
Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms. Nature communications 15 (1) (2024)
Yaroslav Lyutvinskiy, Konstantin O Nagornov, Anton N Kozhinov, Natalia Gasilova, Laure Menin, Zhaowei Meng, Xuepei Zhang, Amir Ata Saei, Tingting Fu, Julia Chamot-Rooke, Yury O Tsybin, Alexander A Makarov, Roman A Zubarev
Adding Color to Mass Spectra of Biopolymers: Charge Determination Analysis (CHARDA) Assigns Charge State to Every Ion Peak. Journal of the American Society for Mass Spectrometry (2024)
Yaroslav Lyutvinskiy, Konstantin O Nagornov, Anton N Kozhinov, Natalia Gasilova, Laure Menin, Zhaowei Meng, Xuepei Zhang, Amir Ata Saei, Tingting Fu, Julia Chamot-Rooke, Yury O Tsybin, Alexander A Makarov, Roman A Zubarev
Adding Color to Mass Spectra of Biopolymers: Charge Determination Analysis (CHARDA) Assigns Charge State to Every Ion Peak. Journal of the American Society for Mass Spectrometry 35 (5) (2024)
David Fernandez-Martinez, Youxin Kong, Sylvie Goussard, Agustin Zavala, Pauline Gastineau, Martial Rey, Gabriel Ayme, Julia Chamot-Rooke, Pierre LaFaye, Matthijn Vos, Ariel Mechaly, Guillaume Duménil
Publisher Correction: Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms. Nature communications 15 (1) (2024)
David Fernandez-Martinez, Youxin Kong, Sylvie Goussard, Agustin Zavala, Pauline Gastineau, Martial Rey, Gabriel Ayme, Julia Chamot-Rooke, Pierre LaFaye, Matthijn Vos, Ariel Mechaly, Guillaume Duménil
Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms. Nature communications 15 (1) (2024)
Valérie Biou, Ricardo Jorge Diogo Adaixo, Mohamed Chami, Pierre-Damien Coureux, Benoist Laurent, Véronique Yvette Ntsogo Enguéné, Gisele Cardoso Amorim, Nadia Izadi-Pruneyre, Christian Malosse, Julia Chamot-Rooke, Henning Stahlberg, Philippe Delepelaire
Author Correction: Structural and molecular determinants for the interaction of ExbB from Serratia marcescens and HasB, a TonB paralog. Communications biology 6 (1) (2023)
Valérie Biou, Ricardo Jorge Diogo Adaixo, Mohamed Chami, Pierre-Damien Coureux, Benoist Laurent, Véronique Yvette Ntsogo Enguéné, Gisele Cardoso Amorim, Nadia Izadi-Pruneyre, Christian Malosse, Julia Chamot-Rooke, Henning Stahlberg, Philippe Delepelaire
Author Correction: Structural and molecular determinants for the interaction of ExbB from Serratia marcescens and HasB, a TonB paralog. Communications biology 6 (1) (2023)
David L Tabb, Kyowon Jeong, Karen Druart, Megan S Gant, Kyle A Brown, Carrie Nicora, Mowei Zhou, Sneha Couvillion, Ernesto Nakayasu, Janet E Williams, Haley K Peterson, Michelle K McGuire, Mark A McGuire, Thomas O Metz, Julia Chamot-Rooke
Comparing Top-Down Proteoform Identification: Deconvolution, PrSM Overlap, and PTM Detection. Journal of proteome research (2023)
Jonathan Dhenin, Valérie Lafont, Mathieu Dupré, Alain Krick, Christine Mauriac, Julia Chamot-Rooke
Monitoring mAb proteoforms in mouse plasma using an automated immunocapture combined with top-down and middle-down mass spectrometry. Proteomics (2023)
Frédéric Fischer, Egor Vorontsov, Evelyne Turlin, Christian Malosse, Camille Garcia, David L Tabb, Julia Chamot-Rooke, Riccardo Percudani, Daniel Vinella, Hilde de Reuse
Expansion of nickel binding- and histidine-rich proteins during gastric adaptation of Helicobacter species. Metallomics : integrated biometal science 14 (9) (2022)
Dukas Jurėnas, Martial Rey, Deborah Byrne, Julia Chamot-Rooke, Laurent Terradot, Éric Cascales
Salmonella antibacterial Rhs polymorphic toxin inhibits translation through ADP-ribosylation of EF-Tu P-loop. Nucleic acids research (2022)
Valérie Biou, Ricardo Jorge Diogo Adaixo, Mohamed Chami, Pierre-Damien Coureux, Benoist Laurent, Véronique Yvette Ntsogo Enguéné, Gisele Cardoso Amorim, Nadia Izadi-Pruneyre, Christian Malosse, Julia Chamot-Rooke, Henning Stahlberg, Philippe Delepelaire
Structural and molecular determinants for the interaction of ExbB from Serratia marcescens and HasB, a TonB paralog. Communications biology 5 (1) (2022)
Mathieu Dupré, Magalie Duchateau, Rebecca Sternke-Hoffmann, Amelie Boquoi, Christian Malosse, Roland Fenk, Rainer Haas, Alexander K Buell, Martial Rey, Julia Chamot-Rooke
De Novo Sequencing of Antibody Light Chain Proteoforms from Patients with Multiple Myeloma. Analytical chemistry 93 (30) (2021)
Dukas Jurėnas, Leonardo Talachia Rosa, Martial Rey, Julia Chamot-Rooke, Remi Fronzes, Éric Cascales
Mounting, structure and autocleavage of a type VI secretion-associated Rhs polymorphic toxin. Nature communications 12 (1) (2021)
Guillaume Dumas, Hany Goubran-Botros, Mariette Matondo, Cécile Pagan, Cyril Boulègue, Thibault Chaze, Julia Chamot-Rooke, Erik Maronde, Thomas Bourgeron
Mass-spectrometry analysis of the human pineal proteome during night and day and in autism. Journal of pineal research 70 (3) (2021)
Diogo Borges Lima, Mathieu Dupré, Marlon Dias Mariano Santos, Paulo Costa Carvalho, Julia Chamot-Rooke
DiagnoTop: A Computational Pipeline for Discriminating Bacterial Pathogens without Database Search. Journal of the American Society for Mass Spectrometry 32 (6) (2021)
Martial Rey, Jonathan Dhenin, Youxin Kong, Lucienne Nouchikian, Isaac Filella, Magalie Duchateau, Mathieu Dupré, Riccardo Pellarin, Guillaume Duménil, Julia Chamot-Rooke
Advanced In Vivo Cross-Linking Mass Spectrometry Platform to Characterize Proteome-Wide Protein Interactions. Analytical chemistry 93 (9) (2021)
Lloyd M Smith, Jeffery N Agar, Julia Chamot-Rooke, Paul O Danis, Ying Ge, Joseph A Loo, Ljiljana Pasa-Tolic, Yury O Tsybin, Michael P Snyder, null null
The Human Proteoform Project: Defining the human proteome. Science advances 7 (46) (2021)
Cyril Addi, Adrien Presle, Stéphane Frémont, Frédérique Cuvelier, Murielle Rocancourt, Florine Milin, Sandrine Schmutz, Julia Chamot-Rooke, Thibault Douche, Magalie Duchateau, Quentin Giai Gianetto, Audrey Salles, Hervé Ménager, Mariette Matondo, Pascale Zimmermann, Neetu Gupta-Rossi, Arnaud Echard
The Flemmingsome reveals an ESCRT-to-membrane coupling via ALIX/syntenin/syndecan-4 required for completion of cytokinesis. Nature communications 11 (1) (2020)
Lloyd M Smith, Paul M Thomas, Michael R Shortreed, Leah V Schaffer, Ryan T Fellers, Richard D LeDuc, Trisha Tucholski, Ying Ge, Jeffery N Agar, Lissa C Anderson, Julia Chamot-Rooke, Joseph Gault, Joseph A Loo, Ljiljana Pasa-Tolic, Carol V Robinson, Hartmut Schlüter, Yury O Tsybin, Juan Antonio Vizcaino, Juan Antonio Vizcaíno, Paul O Danis, Michael P Snyder
A five-level classification system for proteoform identifications. Nature methods 16 (10) (2020)
Mathieu Dupré, Magalie Duchateau, Christian Malosse, Diogo Borges-Lima, Valeria Calvaresi, Isabelle Podglajen, Dominique Clermont, Martial Rey, Julia Chamot-Rooke
Optimization of a Top-Down Proteomics Platform for Closely Related Pathogenic Bacterial Discrimination. Journal of proteome research 20 (1) (2020)
Kristina Srzentić, Luca Fornelli, Yury O Tsybin, Joseph A Loo, Henrique Seckler, Jeffrey N Agar, Lissa C Anderson, Dina L Bai, Alain Beck, Jennifer S Brodbelt, Yuri E M van der Burgt, Julia Chamot-Rooke, Sneha Chatterjee, Yunqiu Chen, David James Clark, Paul O Danis, Jolene K Diedrich, Robert A D'Ippolito, Mathieu Dupré, Natalia Gasilova, Ying Ge, Young Ah Goo, David R Goodlett, Sylvester Greer, Kim F Haselmann, Lidong He, Christopher L Hendrickson, Joshua D Hinkle, Matthew V Holt, Sam Hughes, Donald F Hunt, Michael P Snyder, Anton N Kozhinov, Ziqing Lin, Christian Malosse, Alan G Marshall, Laure Menin, Robert J Millikin, Konstantin O Nagornov, Simone Nicolardi, Ljiljana Paša-Tolić, Stuart Pengelley, Neil R Quebbemann, Anja Resemann, Wendy Sandoval, Richa Sarin, Nicholas D Schmitt, Jeffrey Shabanowitz, Jared B Shaw, Michael R Shortreed, Lloyd M Smith, Frank Sobott, Detlev Suckau, Timothy Toby, Chad R Weisbrod, Norelle C Wildburger, John Yates Iii, Sung Hwan Yoon, Nicolas L Young, Mowei Zhou
Interlaboratory Study for Characterizing Monoclonal Antibodies by Top-Down and Middle-Down Mass Spectrometry. Journal of the American Society for Mass Spectrometry 31 (9) (2020)
Daniel P Donnelly, Catherine M Rawlins, Caroline J DeHart, Luca Fornelli, Luis F Schachner, Ziqing Lin, Jennifer L Lippens, Krishna C Aluri, Richa Sarin, Bifan Chen, Carter Lantz, Wonhyeuk Jung, Kendall R Johnson, Antonius Koller, Jeremy J Wolff, Iain D G Campuzano, Jared R Auclair, Alexander R Ivanov, Julian P Whitelegge, Ljiljana Pasa-Tolic, Julia Chamot-Rooke, Paul O Danis, Lloyd M Smith, Yury O Tsybin, Joseph A Loo, Ying Ge, Michael P Snyder, Jeffery N Agar
Best practices and benchmarks for intact protein analysis for top-down mass spectrometry. Nature methods 16 (7) (2019)
Martial Rey, Mathieu Dupré, Isabel Lopez-Neira, Magalie Duchateau, Julia Chamot-Rooke
eXL-MS: An Enhanced Cross-Linking Mass Spectrometry Workflow To Study Protein Complexes. Analytical chemistry 90 (18) (2018)