David James Clark (David J Clarke)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 31

Top Venues

Chemical communications (Cambridge, England)

The Analyst

Journal of the American Chemical Society

Journal of the American Society for Mass Spectrometry

University of Edinburgh

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Edinburgh Aug 01 2014

United Kingdom

Senior Lecturer & Chancellor's Research Fellow :: School of Chemistry

Publications

Clinton G L Veale, Abir Chakraborty, Richwell Mhlanga, Fernando Albericio, Beatriz G de la Torre, Adrienne L Edkins, David James Clark
A native mass spectrometry approach to qualitatively elucidate interfacial epitopes of transient protein-protein interactions. Chemical communications (Cambridge, England) 60 (45) (2024)
Aochiu Chen, Rebecca N Re, Tony D Davis, Kelley Tran, Yuta W Moriuchi, Sitong Wu, James J La Clair, Gordon V Louie, Marianne E Bowman, David James Clark, C L Logan Mackay, Dominic J Campopiano, Joseph A P Noel, Michael D Burkart
Visualizing the Interface of Biotin and Fatty Acid Biosynthesis through SuFEx Probes. Journal of the American Chemical Society 146 (2) (2024)
Fleurdeliz Maglangit, Shan Wang, Arvin Moser, Kwaku Kyeremeh, Laurent Trembleau, Yongjun Zhou, David James Clark, Jioji N Tabudravu, Hai Deng
Accraspiroketides A-B, Phenylnaphthacenoid-Derived Polyketides with Unprecedented [6 + 6+6 + 6] + [5 + 5] Spiro-Architecture. Journal of natural products 87 (4) (2024)
Zak Towle, Faye L Cruickshank, C L Logan Mackay, David James Clark, Louise E Horsfall
Utilising Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) to track the oxidation of lignin by an alkaliphilic laccase. The Analyst 149 (8) (2024)
Zak Towle, Faye L Cruickshank, C L Logan Mackay, David James Clark, Louise E Horsfall
Utilising Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) to track the oxidation of lignin by an alkaliphilic laccase. The Analyst (2024)
Aochiu Chen, Rebecca N Re, Tony D Davis, Kelley Tran, Yuta W Moriuchi, Sitong Wu, James J La Clair, Gordon V Louie, Marianne E Bowman, David James Clark, C L Logan Mackay, Dominic J Campopiano, Joseph A P Noel, Michael D Burkart
Visualizing the Interface of Biotin and Fatty Acid Biosynthesis through SuFEx Probes. Journal of the American Chemical Society 146 (2) (2024)
Fleurdeliz Maglangit, Shan Wang, Arvin Moser, Kwaku Kyeremeh, Laurent Trembleau, Yongjun Zhou, David James Clark, Jioji N Tabudravu, Hai Deng
Accraspiroketides A-B, Phenylnaphthacenoid-Derived Polyketides with Unprecedented [6 + 6+6 + 6] + [5 + 5] Spiro-Architecture. Journal of natural products 87 (4) (2024)
Clinton G L Veale, Abir Chakraborty, Richwell Mhlanga, Fernando Albericio, Beatriz G de la Torre, Adrienne L Edkins, David James Clark
A native mass spectrometry approach to qualitatively elucidate interfacial epitopes of transient protein-protein interactions. Chemical communications (Cambridge, England) (2024)
Aochiu Chen, Rebecca N Re, Tony D Davis, Kelley Tran, Yuta W Moriuchi, Sitong Wu, James J La Clair, Gordon V Louie, Marianne E Bowman, David James Clark, C L Logan Mackay, Dominic J Campopiano, Joseph A P Noel, Michael D Burkart
Visualizing the Interface of Biotin and Fatty Acid Biosynthesis through SuFEx Probes. Journal of the American Chemical Society (2024)
Aochiu Chen, Rebecca N Re, Tony D Davis, Kelley Tran, Yuta W Moriuchi, Sitong Wu, James J La Clair, Gordon V Louie, Marianne E Bowman, David James Clark, C L Logan Mackay, Dominic J Campopiano, Joseph A P Noel, Michael D Burkart
Visualizing the Interface of Biotin and Fatty Acid Biosynthesis through SuFEx Probes. Journal of the American Chemical Society 146 (2) (2024)
Fleurdeliz Maglangit, Shan Wang, Arvin Moser, Kwaku Kyeremeh, Laurent Trembleau, Yongjun Zhou, David James Clark, Jioji N Tabudravu, Hai Deng
Accraspiroketides A-B, Phenylnaphthacenoid-Derived Polyketides with Unprecedented [6 + 6+6 + 6] + [5 + 5] Spiro-Architecture. Journal of natural products (2024)
Clinton G L Veale, Abir Chakraborty, Richwell Mhlanga, Fernando Albericio, Beatriz G de la Torre, Adrienne L Edkins, David James Clark
A native mass spectrometry approach to qualitatively elucidate interfacial epitopes of transient protein-protein interactions. Chemical communications (Cambridge, England) 60 (45) (2024)
Zak Towle, Faye L Cruickshank, C L Logan Mackay, David James Clark, Louise E Horsfall
Utilising Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) to track the oxidation of lignin by an alkaliphilic laccase. The Analyst 149 (8) (2024)
Zak Towle, Faye L Cruickshank, C L Logan Mackay, David James Clark, Louise E Horsfall
Utilising Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) to track the oxidation of lignin by an alkaliphilic laccase. The Analyst 149 (8) (2024)
Zak Towle, Faye L Cruickshank, C L Logan Mackay, David James Clark, Louise E Horsfall
Utilising Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) to track the oxidation of lignin by an alkaliphilic laccase. The Analyst 149 (8) (2024)
Clinton G L Veale, Abir Chakraborty, Richwell Mhlanga, Fernando Albericio, Beatriz G de la Torre, Adrienne L Edkins, David James Clark
A native mass spectrometry approach to qualitatively elucidate interfacial epitopes of transient protein-protein interactions. Chemical communications (Cambridge, England) 60 (45) (2024)
Rebecca S Saleeb, Craig Leighton, Ji-Eun Lee, Judi O'Shaughnessy, Kiani Jeacock, Alexandre Chappard, Robyn Cumberland, Tianxiao Zhao, Sarah R Ball, Margaret Sunde, David James Clark, Kristin Piché, Jacob A McPhail, Ariel Louwrier, Rachel Angers, Sonia Gandhi, Patrick Downey, Tilo Kunath, Mathew H Horrocks
Two-color coincidence single-molecule pulldown for the specific detection of disease-associated protein aggregates. Science advances 9 (46) (2023)
Kiani Jeacock, Alexandre Chappard, Kelly J Gallagher, C L Logan Mackay, David P A Kilgour, Mathew H Horrocks, Tilo Kunath, David James Clark
Determining the Location of the α-Synuclein Dimer Interface Using Native Top-Down Fragmentation and Isotope Depletion-Mass Spectrometry. Journal of the American Society for Mass Spectrometry (2023)
Xuan Feng, Qingzhi Zhang, David James Clark, Hai Deng, David O'Hagan
3'- O -β-Glucosyl-4',5'-didehydro-5'-deoxyadenosine Is a Natural Product of the Nucleocidin Producers Streptomyces virens and Streptomyces calvus . Journal of natural products (2023)
Kiani Jeacock, Alexandre Chappard, Kelly J Gallagher, C L Logan Mackay, David P A Kilgour, Mathew H Horrocks, Tilo Kunath, David James Clark
Determining the Location of the α-Synuclein Dimer Interface Using Native Top-Down Fragmentation and Isotope Depletion-Mass Spectrometry. Journal of the American Society for Mass Spectrometry (2023)
Jennifer Ross, Zak McIver, Thomas Lambert, Cecilia Piergentili, Jasmine Emma Bird, Kelly J Gallagher, Faye L Cruickshank, Patrick James, Efrain Zarazúa-Arvizu, Louise E Horsfall, Kevin John Waldron, Marcus D Wilson, C Logan Mackay, Arnaud Basle, David James Clark, Jon Marles-Wright
Pore dynamics and asymmetric cargo loading in an encapsulin nanocompartment. Science advances 8 (4) (2022)
Minee L Choi, Alexandre Chappard, Bhanu P Singh, Catherine Maclachlan, Margarida Rodrigues, Evgeniya I Fedotova, Alexey V Berezhnov, Suman De, Christopher J Peddie, Dilan Athauda, Gurvir S Virdi, Weijia Zhang, James R Evans, Anna I Wernick, Zeinab Shadman Zanjani, Plamena R Angelova, Noemí Esteras, Andrey Y Vinokurov, Katie Morris, Kiani Jeacock, Laura Tosatto, Daniel Little, Paul Gissen, David James Clark, Tilo Kunath, Lucy Collinson, David Klenerman, Andrey Y Abramov, Mathew H Horrocks, Sonia Gandhi
Pathological structural conversion of α-synuclein at the mitochondria induces neuronal toxicity. Nature neuroscience 25 (9) (2022)
Elsa Zacco, Owen Kantelberg, Edoardo Milanetti, Alexandros Armaos, Francesco Paolo Panei, Jenna M Gregory, Kiani Jeacock, David James Clark, Siddharthan Chandran, Giancarlo Ruocco, Stefano Gustincich, Mathew H Horrocks, Annalisa Pastore, Gian Gaetano Tartaglia
Probing TDP-43 condensation using an in silico designed aptamer. Nature communications 13 (1) (2022)
Michaelone C Vaaltyn, Maria Mateos-Jimenez, Ronel Müller, C Logan Mackay, Adrienne Lesley Edkins, David James Clark, Clinton G L Veale
Native Mass Spectrometry-Guided Screening Identifies Hit Fragments for HOP-HSP90 PPI Inhibition. Chembiochem : a European journal of chemical biology 23 (21) (2022)
Shan Wang, Sixing Lin, Qing Fang, Roland Gyampoh, Zhou Lu, Yingli Gao, David James Clark, Kewen Wu, Laurent Trembleau, Zixin Deng, Kwaku Kyeremeh, Bruce Forbes Milne, Jioji N Tabudravu, Hai Deng
A ribosomally synthesised and post-translationally modified peptide containing a β-enamino acid and a macrocyclic motif. Nature communications 13 (1) (2022)
Clinton G L Veale, Maria Mateos-Jiménez, Michaelone C Vaaltyn, Ronel Müller, Matodzi P Makhubu, Mahama Alhassan, Beatriz G de la Torre, Fernando Albericio, C L Logan Mackay, Adrienne Lesley Edkins, David James Clark
A native mass spectrometry platform identifies HOP inhibitors that modulate the HSP90-HOP protein-protein interaction. Chemical communications (Cambridge, England) 57 (83) (2021)
Clinton G L Veale, Maria Mateos Jimenez, C Logan Mackay, David James Clark
Native ion mobility mass spectrometry reveals that small organic acid fragments impart gas-phase stability to carbonic anhydrase II. Rapid communications in mass spectrometry : RCM 34 (2) (2020)
Kelly J Gallagher, Michael Palasser, Sam Hughes, C L Logan Mackay, David P A Kilgour, David James Clark
Isotope Depletion Mass Spectrometry (ID-MS) for Accurate Mass Determination and Improved Top-Down Sequence Coverage of Intact Proteins. Journal of the American Society for Mass Spectrometry 31 (3) (2020)
Kristina Srzentić, Luca Fornelli, Yury O Tsybin, Joseph A Loo, Henrique Seckler, Jeffrey N Agar, Lissa C Anderson, Dina L Bai, Alain Beck, Jennifer S Brodbelt, Yuri E M van der Burgt, Julia Chamot-Rooke, Sneha Chatterjee, Yunqiu Chen, David James Clark, Paul O Danis, Jolene K Diedrich, Robert A D'Ippolito, Mathieu Dupré, Natalia Gasilova, Ying Ge, Young Ah Goo, David R Goodlett, Sylvester Greer, Kim F Haselmann, Lidong He, Christopher L Hendrickson, Joshua D Hinkle, Matthew V Holt, Sam Hughes, Donald F Hunt, Michael P Snyder, Anton N Kozhinov, Ziqing Lin, Christian Malosse, Alan G Marshall, Laure Menin, Robert J Millikin, Konstantin O Nagornov, Simone Nicolardi, Ljiljana Paša-Tolić, Stuart Pengelley, Neil R Quebbemann, Anja Resemann, Wendy Sandoval, Richa Sarin, Nicholas D Schmitt, Jeffrey Shabanowitz, Jared B Shaw, Michael R Shortreed, Lloyd M Smith, Frank Sobott, Detlev Suckau, Timothy Toby, Chad R Weisbrod, Norelle C Wildburger, John Yates Iii, Sung Hwan Yoon, Nicolas L Young, Mowei Zhou
Interlaboratory Study for Characterizing Monoclonal Antibodies by Top-Down and Middle-Down Mass Spectrometry. Journal of the American Society for Mass Spectrometry 31 (9) (2020)
Lulu H Tucker, Gregory R Hamm, Rebecca J E Sargeant, Richard J A Goodwin, C L Logan Mackay, Colin J Campbell, David James Clark
Untargeted Metabolite Mapping in 3D Cell Culture Models Using High Spectral Resolution FT-ICR Mass Spectrometry Imaging. Analytical chemistry 91 (15) (2019)
Didi He, Sam Hughes, Sally Vanden-Hehir, Atanas Georgiev, Kirsten Altenbach, Emma Tarrant, C Logan Mackay, Kevin John Waldron, David James Clark, Jon Marles-Wright
Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments. eLife 5 (2016)

David James Clark.css-eqlu8i{font-size:small;padding-left:4px;} (David J Clarke)

Publication Activity (10 Years)

Top Topics

Top Venues

David James Clark (David J Clarke)