Kendra Hoekzema

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 30

Top Topics

Pluripotent Stem Cells

Congenital Heart Disease

Genome Wide Association Study

Top Venues

Genome research

bioRxiv : the preprint server for biology

medRxiv : the preprint server for health sciences

Science advances

This page only lists publications with an associated author ORCID identifier.

Publications

Xavi Guitart, David Porubsky, DongAhn Yoo, Max L Dougherty, Philip C Dishuck, Katherine M Munson, Alexandra P Lewis, Kendra Hoekzema, Jordan Knuth, Stephen Chang, Tomi Pastinen, Evan E Eichler
Independent expansion, selection and hypervariability of the TBC1D3 gene family in humans. Genome research (2024)
David Porubsky, Harriet Dashnow, Thomas A Sasani, Glennis A Logsdon, Pille Hallast, Michelle D Noyes, Zev N Kronenberg, Tom Mokveld, Nidhi Koundinya, Cillian Nolan, Cody J Steely, Andrea Guarracino, Egor Dolzhenko, William T Harvey, William J Rowell, Kirill Grigorev, Thomas J Nicholas, Keisuke K Oshima, Jiadong Lin, Peter Ebert, W Scott Watkins, Tiffany Y Leung, Vincent C T Hanlon, Sean McGee, Brent S Pedersen, Michael E Goldberg, Hannah C Happ, Hyeonsoo Jeong, Katherine M Munson, Kendra Hoekzema, Daniel D Chan, Yanni Wang, Jordan Knuth, Gage H Garcia, Cairbre Fanslow, Christine Lambert, Charles Lee, Joshua D Smith, Shawn E Levy, Christopher E Mason, Erik P Garrison, Peter M Lansdorp, Deborah W Neklason, Lynn B Jorde, Aaron R Quinlan, Michael A Eberle, Evan E Eichler
A familial, telomere-to-telomere reference for human de novo mutation and recombination from a four-generation pedigree. bioRxiv : the preprint server for biology (2024)
F Kumara Mastrorosa, Allison N Rozanski, William T Harvey, Jordan Knuth, Gage H Garcia, Katherine M Munson, Kendra Hoekzema, Glennis A Logsdon, Evan E Eichler
Complete chromosome 21 centromere sequences from a Down syndrome family reveal size asymmetry and differences in kinetochore attachment. bioRxiv : the preprint server for biology (2024)
Xavi Guitart, David Porubsky, DongAhn Yoo, Max L Dougherty, Philip C Dishuck, Katherine M Munson, Alexandra P Lewis, Kendra Hoekzema, Jordan Knuth, Stephen Chang, Tomi Pastinen, Evan E Eichler
Independent expansion, selection and hypervariability of the TBC1D3 gene family in humans. Genome research (2024)
David Porubsky, Harriet Dashnow, Thomas A Sasani, Glennis A Logsdon, Pille Hallast, Michelle D Noyes, Zev N Kronenberg, Tom Mokveld, Nidhi Koundinya, Cillian Nolan, Cody J Steely, Andrea Guarracino, Egor Dolzhenko, William T Harvey, William J Rowell, Kirill Grigorev, Thomas J Nicholas, Keisuke K Oshima, Jiadong Lin, Peter Ebert, W Scott Watkins, Tiffany Y Leung, Vincent C T Hanlon, Sean McGee, Brent S Pedersen, Michael E Goldberg, Hannah C Happ, Hyeonsoo Jeong, Katherine M Munson, Kendra Hoekzema, Daniel D Chan, Yanni Wang, Jordan Knuth, Gage H Garcia, Cairbre Fanslow, Christine Lambert, Charles Lee, Joshua D Smith, Shawn E Levy, Christopher E Mason, Erik P Garrison, Peter M Lansdorp, Deborah W Neklason, Lynn B Jorde, Aaron R Quinlan, Michael A Eberle, Evan E Eichler
A familial, telomere-to-telomere reference for human de novo mutation and recombination from a four-generation pedigree. bioRxiv : the preprint server for biology (2024)
Jonas A Gustafson, Sophia B Gibson, Nikhita Damaraju, Miranda Perez-Galey Zalusky, Kendra Hoekzema, David Twesigomwe, Lei Yang, Anthony A Snead, Phillip Andrew Richmond, Wouter De Coster, Nathan D Olson, Andrea Guarracino, Qiuhui Li, Angela L Miller, Joy Goffena, Zachery Anderson, Sophie Hr Storz, Sydney A Ward, Maisha Sinha, Claudia Gonzaga-Jauregui, Wayne E Clarke, Anna O Basile, André Corvelo, Catherine E Reeves, Adrienne Helland, Rajeeva Lochan Musunuri, Mahler Revsine, Karynne E Patterson, Cate Paschal, Christina Zakarian, Sara Goodwin, Tanner D Jensen, Esther Robb, null null, null null, null null, W Richard McCombie, Fritz J Sedlazeck, Justin M Zook, Stephen B Montgomery, Erik P Garrison, Mikhail Kolmogorov, Michael C Schatz, Richard N McLaughlin, Harriet Dashnow, Michael C Zody, Matthew William Loose, Miten Jain, Evan E Eichler, Danny E Miller
Nanopore sequencing of 1000 Genomes Project samples to build a comprehensive catalog of human genetic variation. medRxiv : the preprint server for health sciences (2024)
Xavi Guitart, David Porubsky, DongAhn Yoo, Max L Dougherty, Philip C Dishuck, Katherine M Munson, Alexandra P Lewis, Kendra Hoekzema, Jordan Knuth, Stephen Chang, Tomi Pastinen, Evan E Eichler
Independent expansion, selection and hypervariability of the TBC1D3 gene family in humans. bioRxiv : the preprint server for biology (2024)
Xavi Guitart, David Porubsky, DongAhn Yoo, Max L Dougherty, Philip C Dishuck, Katherine M Munson, Alexandra P Lewis, Kendra Hoekzema, Jordan Knuth, Stephen Chang, Tomi Pastinen, Evan E Eichler
Independent expansion, selection and hypervariability of the TBC1D3 gene family in humans. bioRxiv : the preprint server for biology (2024)
Xavi Guitart, David Porubsky, DongAhn Yoo, Max L Dougherty, Philip C Dishuck, Katherine M Munson, Alexandra P Lewis, Kendra Hoekzema, Jordan Knuth, Stephen Chang, Tomi Pastinen, Evan E Eichler
Independent expansion, selection and hypervariability of the TBC1D3 gene family in humans. Genome research (2024)
David Porubsky, Harriet Dashnow, Thomas A Sasani, Glennis A Logsdon, Pille Hallast, Michelle D Noyes, Zev N Kronenberg, Tom Mokveld, Nidhi Koundinya, Cillian Nolan, Cody J Steely, Andrea Guarracino, Egor Dolzhenko, William T Harvey, William J Rowell, Kirill Grigorev, Thomas J Nicholas, Keisuke K Oshima, Jiadong Lin, Peter Ebert, W Scott Watkins, Tiffany Y Leung, Vincent C T Hanlon, Sean McGee, Brent S Pedersen, Michael E Goldberg, Hannah C Happ, Hyeonsoo Jeong, Katherine M Munson, Kendra Hoekzema, Daniel D Chan, Yanni Wang, Jordan Knuth, Gage H Garcia, Cairbre Fanslow, Christine Lambert, Charles Lee, Joshua D Smith, Shawn E Levy, Christopher E Mason, Erik P Garrison, Peter M Lansdorp, Deborah W Neklason, Lynn B Jorde, Aaron R Quinlan, Michael A Eberle, Evan E Eichler
A familial, telomere-to-telomere reference for human de novo mutation and recombination from a four-generation pedigree. bioRxiv : the preprint server for biology (2024)
Jonas A Gustafson, Sophia B Gibson, Nikhita Damaraju, Miranda Perez-Galey Zalusky, Kendra Hoekzema, David Twesigomwe, Lei Yang, Anthony A Snead, Phillip Andrew Richmond, Wouter De Coster, Nathan D Olson, Andrea Guarracino, Qiuhui Li, Angela L Miller, Joy Goffena, Zachery Anderson, Sophie Hr Storz, Sydney A Ward, Maisha Sinha, Claudia Gonzaga-Jauregui, Wayne E Clarke, Anna O Basile, André Corvelo, Catherine E Reeves, Adrienne Helland, Rajeeva Lochan Musunuri, Mahler Revsine, Karynne E Patterson, Cate R Paschal, Christina Zakarian, Sara Goodwin, Tanner D Jensen, Esther Robb, null null, null null, null null, W Richard McCombie, Fritz J Sedlazeck, Justin M Zook, Stephen B Montgomery, Erik P Garrison, Mikhail Kolmogorov, Michael C Schatz, Richard N McLaughlin, Harriet Dashnow, Michael C Zody, Matthew William Loose, Miten Jain, Evan E Eichler, Danny E Miller
Nanopore sequencing of 1000 Genomes Project samples to build a comprehensive catalog of human genetic variation. medRxiv : the preprint server for health sciences (2024)
David Porubsky, Harriet Dashnow, Thomas A Sasani, Glennis A Logsdon, Pille Hallast, Michelle D Noyes, Zev N Kronenberg, Tom Mokveld, Nidhi Koundinya, Cillian Nolan, Cody J Steely, Andrea Guarracino, Egor Dolzhenko, William T Harvey, William J Rowell, Kirill Grigorev, Thomas J Nicholas, Keisuke K Oshima, Jiadong Lin, Peter Ebert, W Scott Watkins, Tiffany Y Leung, Vincent C T Hanlon, Sean McGee, Brent S Pedersen, Michael E Goldberg, Hannah C Happ, Hyeonsoo Jeong, Katherine M Munson, Kendra Hoekzema, Daniel D Chan, Yanni Wang, Jordan Knuth, Gage H Garcia, Cairbre Fanslow, Christine Lambert, Charles Lee, Joshua D Smith, Shawn E Levy, Christopher E Mason, Erik P Garrison, Peter M Lansdorp, Deborah W Neklason, Lynn B Jorde, Aaron R Quinlan, Michael A Eberle, Evan E Eichler
A familial, telomere-to-telomere reference for human de novo mutation and recombination from a four-generation pedigree. bioRxiv : the preprint server for biology (2024)
Xavi Guitart, David Porubsky, DongAhn Yoo, Max L Dougherty, Philip C Dishuck, Katherine M Munson, Alexandra P Lewis, Kendra Hoekzema, Jordan Knuth, Stephen Chang, Tomi Pastinen, Evan E Eichler
Independent expansion, selection and hypervariability of the TBC1D3 gene family in humans. bioRxiv : the preprint server for biology (2024)
Xavi Guitart, David Porubsky, DongAhn Yoo, Max L Dougherty, Philip C Dishuck, Katherine M Munson, Alexandra P Lewis, Kendra Hoekzema, Jordan Knuth, Stephen Chang, Tomi Pastinen, Evan E Eichler
Independent expansion, selection and hypervariability of the TBC1D3 gene family in humans. bioRxiv : the preprint server for biology (2024)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall. Genome research 33 (12) (2023)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant calling precision and recall. bioRxiv : the preprint server for biology (2023)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall. Genome research 33 (12) (2023)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall. Genome research 33 (12) (2023)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall. Genome research 33 (12) (2023)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall. Genome research 33 (12) (2023)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall. Genome research 33 (12) (2023)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall. Genome research 33 (12) (2023)
Glennis A Logsdon, Allison N Rozanski, Fedor D Ryabov, Tamara A Potapova, Valery A Shepelev, Yafei Mao, Mikko Rautiainen, Sergey Koren, Sergey Nurk, David Porubsky, Julian K Lucas, Kendra Hoekzema, Katherine M Munson, Jennifer L Gerton, Adam M Phillippy, Ivan A Alexandrov, Evan E Eichler
The variation and evolution of complete human centromeres. bioRxiv : the preprint server for biology (2023)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall. Genome research 33 (12) (2023)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant calling precision and recall. bioRxiv : the preprint server for biology (2023)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant calling precision and recall. bioRxiv : the preprint server for biology (2023)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall. Genome research 33 (12) (2023)
William T Harvey, Peter Ebert, Jana Ebler, Peter A Audano, Katherine M Munson, Kendra Hoekzema, David Porubsky, Christine R Beck, Tobias Marschall, Kiran V Garimella, Evan E Eichler
Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall. Genome research 33 (12) (2023)
Xiangbin Jia, Shujie Zhang, Senwei Tan, Bing Du, Mei He, Haisong Qin, Jia Chen, Xinyu Duan, Jingsi Luo, Fei Chen, Luping Ouyang, Jian Wang, Guodong Chen, Bin Yu, Ge Zhang, Zimin Zhang, Yongqing Lyu, Yi Huang, Jian Jiao, Jin Yun Helen Chen, Kathryn J Swoboda, Emanuele Agolini, Antonio Novelli, Chiara Leoni, Giuseppe Zampino, Gerarda Cappuccio, Nicola Brunetti-Pierri, Bénédicte Gérard, Emmanuelle Ginglinger, Julie Richer, Hugh J Mcmillan, Alexandre White-Brown, Kendra Hoekzema, Raphael A Bernier, Evangeline C Kurtz-Nelson, Rachel K Earl, Claartje Meddens, Marielle Alders, Meredith Fuchs, Roseline Caumes, Perrine Brunelle, Thomas Smol, Ryan Kuehl, Debra-Lynn Day-Salvatore, Kristin G Monaghan, Michelle M Morrow, Evan E Eichler, Zhengmao Hu, Ling Yuan, Jieqiong Tan, Kun Xia, Yiping Shen, Hui Guo
De novo variants in genes regulating stress granule assembly associate with neurodevelopmental disorders. Science advances 8 (33) (2022)
Mitchell R Vollger, Xavi Guitart, Philip C Dishuck, Ludovica Mercuri, William T Harvey, Ariel Gershman, Mark E Diekhans, Arvis Sulovari, Katherine M Munson, Alexandra P Lewis, Kendra Hoekzema, David Porubsky, Ruiyang Li, Sergey Nurk, Sergey Koren, Karen H Miga, Adam M Phillippy, Winston Timp, Mario Ventura, Evan E Eichler
Segmental duplications and their variation in a complete human genome. Science (New York, N.Y.) 376 (6588) (2022)