Mauricio Barahona

ResearcherID Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 43

Top Topics

Acinetobacter Baumannii

Raman Spectroscopy

Top Venues

The Journal of infectious diseases

Journal of the American Medical Informatics Association : JAMIA

Analytical chemistry

This page only lists publications with an associated author ORCID identifier.

Publications

Yu Wan, Ashleigh C Myall, Adhiratha Boonyasiri, Frances Bolt, Alice Ledda, Siddharth Mookerjee, Andrea Y Weiße, María Getino, Jane F Turton, Hala Abbas, Ruta Prakapaite, Akshay Sabnis, Alireza Abdolrasouli, Kenny Malpartida-Cardenas, Luca Miglietta, Hugo Donaldson, Mark Gilchrist, Katie L Hopkins, Matthew J Ellington, Jonathan A Otter, Gerald Larrouy-Maumus, Andrew M Edwards, Jesus Rodriguez-Manzano, Xavier Didelot, Mauricio Barahona, Alison H Holmes, Elita Jauneikaite, Frances Davies
Integrated Analysis of Patient Networks and Plasmid Genomes to Investigate a Regional, Multispecies Outbreak of Carbapenemase-Producing Enterobacterales Carrying Both blaIMP and mcr-9 Genes. The Journal of infectious diseases 230 (1) (2024)
Dimitar Georgiev, Simon Vilms Pedersen, Ruoxiao Xie, Álvaro Fernández-Galiana, Molly M Stevens, Mauricio Barahona
RamanSPy: An Open-Source Python Package for Integrative Raman Spectroscopy Data Analysis. Analytical chemistry (2024)
Dimitar Georgiev, Simon Vilms Pedersen, Ruoxiao Xie, Álvaro Fernández-Galiana, Molly M Stevens, Mauricio Barahona
RamanSPy: An Open-Source Python Package for Integrative Raman Spectroscopy Data Analysis. Analytical chemistry 96 (21) (2024)
Dimitar Georgiev, Simon Vilms Pedersen, Ruoxiao Xie, Álvaro Fernández-Galiana, Molly M Stevens, Mauricio Barahona
RamanSPy: An Open-Source Python Package for Integrative Raman Spectroscopy Data Analysis. Analytical chemistry 96 (21) (2024)
Yu Wan, Ashleigh C Myall, Adhiratha Boonyasiri, Frances Bolt, Alice Ledda, Siddharth Mookerjee, Andrea Y Weiße, María Getino, Jane F Turton, Hala Abbas, Ruta Prakapaite, Akshay Sabnis, Alireza Abdolrasouli, Kenny Malpartida-Cardenas, Luca Miglietta, Hugo Donaldson, Mark Gilchrist, Katie L Hopkins, Matthew J Ellington, Jonathan A Otter, Gerald Larrouy-Maumus, Andrew M Edwards, Jesus Rodriguez-Manzano, Xavier Didelot, Mauricio Barahona, Alison H Holmes, Elita Jauneikaite, Frances Davies
Integrated analysis of patient networks and plasmid genomes reveals a regional, multi-species outbreak of carbapenemase-producing Enterobacterales carrying both blaIMP and mcr-9 genes. The Journal of infectious diseases (2024)
Thomas Beaney, Sneha Jha, Asem Alaa, Alexander Smith, Jonathan Clarke, Thomas Woodcock, Azeem Majeed, Paul P Aylin, Mauricio Barahona
Comparing natural language processing representations of coded disease sequences for prediction in electronic health records. Journal of the American Medical Informatics Association : JAMIA 31 (7) (2024)
Yu Wan, Ashleigh C Myall, Adhiratha Boonyasiri, Frances Bolt, Alice Ledda, Siddharth Mookerjee, Andrea Y Weiße, María Getino, Jane F Turton, Hala Abbas, Ruta Prakapaite, Akshay Sabnis, Alireza Abdolrasouli, Kenny Malpartida-Cardenas, Luca Miglietta, Hugo Donaldson, Mark Gilchrist, Katie L Hopkins, Matthew J Ellington, Jonathan A Otter, Gerald Larrouy-Maumus, Andrew M Edwards, Jesus Rodriguez-Manzano, Xavier Didelot, Mauricio Barahona, Alison H Holmes, Elita Jauneikaite, Frances Davies
Integrated analysis of patient networks and plasmid genomes reveals a regional, multi-species outbreak of carbapenemase-producing Enterobacterales carrying both blaIMP and mcr-9 genes. The Journal of infectious diseases (2024)
Thomas Beaney, Sneha Jha, Asem Alaa, Alexander Smith, Jonathan Clarke, Thomas Woodcock, Azeem Majeed, Paul P Aylin, Mauricio Barahona
Comparing natural language processing representations of coded disease sequences for prediction in electronic health records. Journal of the American Medical Informatics Association : JAMIA 31 (7) (2024)
Thomas Beaney, Jonathan M Clarke, David Salman, Thomas Woodcock, Azeem Majeed, Paul P Aylin, Mauricio Barahona
Identifying multi-resolution clusters of diseases in ten million patients with multimorbidity in primary care in England. Communications medicine 4 (1) (2024)
Yu Wan, Ashleigh C Myall, Adhiratha Boonyasiri, Frances Bolt, Alice Ledda, Siddharth Mookerjee, Andrea Y Weiße, María Getino, Jane F Turton, Hala Abbas, Ruta Prakapaite, Akshay Sabnis, Alireza Abdolrasouli, Kenny Malpartida-Cardenas, Luca Miglietta, Hugo Donaldson, Mark Gilchrist, Katie L Hopkins, Matthew J Ellington, Jonathan A Otter, Gerald Larrouy-Maumus, Andrew M Edwards, Jesus Rodriguez-Manzano, Xavier Didelot, Mauricio Barahona, Alison H Holmes, Elita Jauneikaite, Frances Davies
Integrated Analysis of Patient Networks and Plasmid Genomes to Investigate a Regional, Multispecies Outbreak of Carbapenemase-Producing Enterobacterales Carrying Both blaIMP and mcr-9 Genes. The Journal of infectious diseases 230 (1) (2024)
Thomas Beaney, Sneha Jha, Asem Alaa, Alexander Smith, Jonathan Clarke, Thomas Woodcock, Azeem Majeed, Paul P Aylin, Mauricio Barahona
Comparing natural language processing representations of coded disease sequences for prediction in electronic health records. Journal of the American Medical Informatics Association : JAMIA 31 (7) (2024)
Yu Wan, Ashleigh C Myall, Adhiratha Boonyasiri, Frances Bolt, Alice Ledda, Siddharth Mookerjee, Andrea Y Weiße, María Getino, Jane F Turton, Hala Abbas, Ruta Prakapaite, Akshay Sabnis, Alireza Abdolrasouli, Kenny Malpartida-Cardenas, Luca Miglietta, Hugo Donaldson, Mark Gilchrist, Katie L Hopkins, Matthew J Ellington, Jonathan A Otter, Gerald Larrouy-Maumus, Andrew M Edwards, Jesus Rodriguez-Manzano, Xavier Didelot, Mauricio Barahona, Alison H Holmes, Elita Jauneikaite, Frances Davies
Integrated analysis of patient networks and plasmid genomes reveals a regional, multi-species outbreak of carbapenemase-producing Enterobacterales carrying both blaIMP and mcr-9 genes. The Journal of infectious diseases (2024)
Yu Wan, Ashleigh C Myall, Adhiratha Boonyasiri, Frances Bolt, Alice Ledda, Siddharth Mookerjee, Andrea Y Weiße, María Getino, Jane F Turton, Hala Abbas, Ruta Prakapaite, Akshay Sabnis, Alireza Abdolrasouli, Kenny Malpartida-Cardenas, Luca Miglietta, Hugo Donaldson, Mark Gilchrist, Katie L Hopkins, Matthew J Ellington, Jonathan A Otter, Gerald Larrouy-Maumus, Andrew M Edwards, Jesus Rodriguez-Manzano, Xavier Didelot, Mauricio Barahona, Alison H Holmes, Elita Jauneikaite, Frances Davies
Integrated Analysis of Patient Networks and Plasmid Genomes to Investigate a Regional, Multispecies Outbreak of Carbapenemase-Producing Enterobacterales Carrying Both blaIMP and mcr-9 Genes. The Journal of infectious diseases 230 (1) (2024)
Yu Wan, Ashleigh C Myall, Adhiratha Boonyasiri, Frances Bolt, Alice Ledda, Siddharth Mookerjee, Andrea Y Weiße, María Getino, Jane F Turton, Hala Abbas, Ruta Prakapaite, Akshay Sabnis, Alireza Abdolrasouli, Kenny Malpartida-Cardenas, Luca Miglietta, Hugo Donaldson, Mark Gilchrist, Katie L Hopkins, Matthew J Ellington, Jonathan A Otter, Gerald Larrouy-Maumus, Andrew M Edwards, Jesus Rodriguez-Manzano, Xavier Didelot, Mauricio Barahona, Alison H Holmes, Elita Jauneikaite, Frances Davies
Integrated analysis of patient networks and plasmid genomes reveals a regional, multi-species outbreak of carbapenemase-producing Enterobacterales carrying both blaIMP and mcr-9 genes. The Journal of infectious diseases (2024)
Dimitar Georgiev, Simon Vilms Pedersen, Ruoxiao Xie, Álvaro Fernández-Galiana, Molly M Stevens, Mauricio Barahona
RamanSPy: An Open-Source Python Package for Integrative Raman Spectroscopy Data Analysis. Analytical chemistry 96 (21) (2024)
Thomas Beaney, Jonathan M Clarke, David Salman, Thomas Woodcock, Azeem Majeed, Paul P Aylin, Mauricio Barahona
Identifying multi-resolution clusters of diseases in ten million patients with multimorbidity in primary care in England. Communications medicine 4 (1) (2024)
Thomas Beaney, Sneha Jha, Asem Alaa, Alexander Smith, Jonathan Clarke, Thomas Woodcock, Azeem Majeed, Paul P Aylin, Mauricio Barahona
Comparing natural language processing representations of coded disease sequences for prediction in electronic health records. Journal of the American Medical Informatics Association : JAMIA (2024)
Yu Wan, Ashleigh C Myall, Adhiratha Boonyasiri, Frances Bolt, Alice Ledda, Siddharth Mookerjee, Andrea Y Weiße, María Getino, Jane F Turton, Hala Abbas, Ruta Prakapaite, Akshay Sabnis, Alireza Abdolrasouli, Kenny Malpartida-Cardenas, Luca Miglietta, Hugo Donaldson, Mark Gilchrist, Katie L Hopkins, Matthew J Ellington, Jonathan A Otter, Gerald Larrouy-Maumus, Andrew M Edwards, Jesus Rodriguez-Manzano, Xavier Didelot, Mauricio Barahona, Alison H Holmes, Elita Jauneikaite, Frances Davies
Integrated analysis of patient networks and plasmid genomes reveals a regional, multi-species outbreak of carbapenemase-producing Enterobacterales carrying both blaIMP and mcr-9 genes. The Journal of infectious diseases (2024)
Felix Laumann, Julius von Kügelgen, Junhyung Park, Bernhard Schölkopf, Mauricio Barahona
Kernel-Based Independence Tests for Causal Structure Learning on Functional Data. Entropy (Basel, Switzerland) 25 (12) (2023)
Felix Laumann, Julius von Kügelgen, Junhyung Park, Bernhard Schölkopf, Mauricio Barahona
Kernel-Based Independence Tests for Causal Structure Learning on Functional Data. Entropy (Basel, Switzerland) 25 (12) (2023)
Dominik J Schindler, Jonathan M Clarke, Mauricio Barahona
Multiscale mobility patterns and the restriction of human movement. Royal Society open science 10 (10) (2023)
Thomas Beaney, Jonathan M Clarke, David Salman, Thomas Woodcock, Azeem Majeed, Mauricio Barahona, Paul Aylin
Identifying potential biases in code sequences in primary care electronic healthcare records: a retrospective cohort study of the determinants of code frequency. BMJ open 13 (9) (2023)
Zhaolu Liu, Robert L Peach, Felix Laumann, Sara Vallejo Mengod, Mauricio Barahona
Kernel-based joint independence tests for multivariate stationary and non-stationary time series. Royal Society open science 10 (11) (2023)
Daniela Rodrigues, Noemi Kreif, Anna Lawrence-Jones, Mauricio Barahona, Erik K Mayer
Reflection on modern methods: constructing directed acyclic graphs (DAGs) with domain experts for health services research. International journal of epidemiology 51 (4) (2022)
Robert L Peach, Alexis Arnaudon, Mauricio Barahona
Relative, local and global dimension in complex networks. Nature communications 13 (1) (2022)
Dhruv Saxena, Alexis Arnaudon, Oscar Cipolato, Michele Gaio, Alain Quentel, Sophia Yaliraki, Dario Pisignano, Andrea Camposeo, Mauricio Barahona, Riccardo Sapienza
Sensitivity and spectral control of network lasers. Nature communications 13 (1) (2022)
Paula Saavedra-García, Monica Roman-Trufero, Hibah A Al-Sadah, Kevin Blighe, Elena Lopez-Jimenez, Marilena Christoforou, Lucy Penfold, Daria Capece, Xiaobei Xiong, Yirun Miao, Katarzyna Parzych, Valentina S Caputo, Alexandros P Siskos, Vesela Encheva, Zijing Liu, Denise Thiel, Martin F Kaiser, Paolo Piazza, Aristeidis Chaidos, Anastasios Karadimitris, Guido Franzoso, Ambrosius P Snijders, Hector C Keun, Diego A Oyarzún, Mauricio Barahona, Holger W Auner
Systems level profiling of chemotherapy-induced stress resolution in cancer cells reveals druggable trade-offs. Proceedings of the National Academy of Sciences of the United States of America 118 (17) (2021)
Stelios Chrysostomou, Rajat Roy, Filippo Prischi, Lucksamon Thamlikitkul, Kathryn L Chapman, Uwais Mufti, Robert L Peach, Laifeng Ding, David C Hancock, Christopher Moore, Miriam Molina-Arcas, Francesco Mauri, David James Pinato, Joel M Abrahams, Silvia Ottaviani, Castellano L, Georgios Giamas, Jennifer Pascoe, Devmini Moonamale, Sarah J Pirrie, Claire Gaunt, Lucinda Billingham, Neil M Steven, Michael Cullen, David Hrouda, Mathias Winkler, John Post, Philip Cohen, Seth J Salpeter, Vered Bar, Adi Zundelevich, Shay Golan, Dan Leibovici, Romain Lara, David R Klug, Sophia N Yaliraki, Mauricio Barahona, Yulan Wang, Julian Downward, J Mark Skehel, Maruf M U Ali, Michael J Seckl, Olivier E Pardo
Repurposed floxacins targeting RSK4 prevent chemoresistance and metastasis in lung and bladder cancer. Science translational medicine 13 (602) (2021)
Thomas Beaney, Jonathan M Clarke, Thomas Woodcock, Rachel McCarthy, Kavitha Saravanakumar, Mauricio Barahona, Mitch Blair, Dougal S Hargreaves
Patterns of healthcare utilisation in children and young people: a retrospective cohort study using routinely collected healthcare data in Northwest London. BMJ open 11 (12) (2021)
Sebastian R Schreglmann, David Wang, Robert L Peach, Junheng Li, Xu Zhang, Anna Latorre, Edward Rhodes, Emanuele Panella, Antonino Mario Cassarà, Edward S Boyden, Mauricio Barahona, Sabato Santaniello, John C Rothwell, Kailash P Bhatia, Nir Grossman
Non-invasive suppression of essential tremor via phase-locked disruption of its temporal coherence. Nature communications 12 (1) (2021)
Jonathan M Clarke, Thomas Beaney, Azeem Majeed, Ara Darzi, Mauricio Barahona
Identifying naturally occurring communities of primary care providers in the English National Health Service in London. BMJ open 10 (7) (2020)
Amadeus Maes, Mauricio Barahona, Claudia Clopath
Learning spatiotemporal signals using a recurrent spiking network that discretizes time. PLoS computational biology 16 (1) (2020)
Jonathan M Clarke, Alice Murray, Sheraz Rehan Markar, Mauricio Barahona, James Kinross, null null
New geographic model of care to manage the post-COVID-19 elective surgery aftershock in England: a retrospective observational study. BMJ open 10 (10) (2020)
Mona K Tonn, Philipp Thomas, Mauricio Barahona, Diego A Oyarzún
Stochastic modelling reveals mechanisms of metabolic heterogeneity. Communications biology 2 (2019)
Juan Kuntz, Philipp Thomas, Guy-Bart V Stan, Mauricio Barahona
Bounding the stationary distributions of the chemical master equation via mathematical programming. The Journal of chemical physics 151 (3) (2019)
Iain G Johnston, Till Hoffmann, Sam F Greenbury, Ornella Cominetti, Muminatou Jallow, Dominic Kwiatkowski, Mauricio Barahona, Nick S Jones, Climent Casals-Pascual
Precision identification of high-risk phenotypes and progression pathways in severe malaria without requiring longitudinal data. NPJ digital medicine 2 (2019)
Robert L Peach, Sophia N Yaliraki, David Lefevre, Mauricio Barahona
Data-driven unsupervised clustering of online learner behaviour. NPJ science of learning 4 (2019)
Jonathan M Clarke, Leigh R Warren, Sonal Arora, Mauricio Barahona, Ara W Darzi
Guiding interoperable electronic health records through patient-sharing networks. NPJ digital medicine 1 (2018)
Maxwell Hodges, Mauricio Barahona, Sophia N Yaliraki
Allostery and cooperativity in multimeric proteins: bond-to-bond propensities in ATCase. Scientific reports 8 (1) (2018)
Mariano Beguerisse-Díaz, Gabriel Bosque, Diego Oyarzún, Jesús Picó, Mauricio Barahona
Flux-dependent graphs for metabolic networks. NPJ systems biology and applications 4 (2018)
Justine Dattani, Mauricio Barahona
Stochastic models of gene transcription with upstream drives: exact solution and sample path characterization. Journal of the Royal Society, Interface 14 (126) (2017)
Vladimir Yu Kiselev, Kristina Kirschner, Michael T Schaub, Tallulah S Andrews, Andrew Yiu, Tamir Chandra, Kedar N Natarajan, Wolf Reik, Mauricio Barahona, Anthony R Green, Martin Hemberg
SC3: consensus clustering of single-cell RNA-seq data. Nature methods 14 (5) (2017)
Mariano Beguerisse-Díaz, Radhika Desikan, Mauricio Barahona
Linear models of activation cascades: analytical solutions and coarse-graining of delayed signal transduction. Journal of the Royal Society, Interface 13 (121) (2016)