Philipp W Messer

ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 34

Top Venues

bioRxiv : the preprint server for biology

G3 (Bethesda, Md.)

eLife

Genetics

Cornell University

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Cornell University Jul 01 2014

United States

Assistant Professor :: Biological Statistics and Computational Biology

Publications

Meera Chotai, Xinzhu Wei, Philipp W Messer
Signatures of selective sweeps in continuous-space populations. bioRxiv : the preprint server for biology (2024)
Jie Du, Weizhe Chen, Xihua Jia, Xuejiao Xu, Emily Yang, Ruizhi Zhou, Yuqi Zhang, Matthew Metzloff, Philipp W Messer, Jackson Champer
Germline Cas9 promoters with improved performance for homing gene drive. Nature communications 15 (1) (2024)
Elizabeth T Chevy, Jiseon Min, Victoria R Caudill, Samuel E Champer, Benjamin C Haller, Clara T Rehmann, Chris C R Smith, Silas B Tittes, Philipp W Messer, Andrew D Kern, Sohini Ramachandran, Peter L Ralph
Population genetics meets ecology: a guide to individual-based simulations in continuous landscapes. bioRxiv : the preprint server for biology (2024)
Jie Du, Weizhe Chen, Xihua Jia, Xuejiao Xu, Emily Yang, Ruizhi Zhou, Yuqi Zhang, Matthew Metzloff, Philipp W Messer, Jackson Champer
Germline Cas9 promoters with improved performance for homing gene drive. Nature communications 15 (1) (2024)
Elizabeth T Chevy, Jiseon Min, Victoria R Caudill, Samuel E Champer, Benjamin C Haller, Clara T Rehmann, Chris C R Smith, Silas B Tittes, Philipp W Messer, Andrew D Kern, Sohini Ramachandran, Peter L Ralph
Population genetics meets ecology: a guide to individual-based simulations in continuous landscapes. bioRxiv : the preprint server for biology (2024)
Elizabeth T Chevy, Jiseon Min, Victoria R Caudill, Samuel E Champer, Benjamin C Haller, Clara T Rehmann, Chris C R Smith, Silas B Tittes, Philipp W Messer, Andrew D Kern, Sohini Ramachandran, Peter L Ralph
Population genetics meets ecology: a guide to individual-based simulations in continuous landscapes. bioRxiv : the preprint server for biology (2024)
Meera Chotai, Xinzhu Wei, Philipp W Messer
Signatures of selective sweeps in continuous-space populations. bioRxiv : the preprint server for biology (2024)
Meera Chotai, Xinzhu Wei, Philipp W Messer
Signatures of selective sweeps in continuous-space populations. bioRxiv : the preprint server for biology (2024)
Peiyu Xu, Shenni Liang, Andrew Hahn, Vivian Zhao, Wai Tung 'Jack' Lo, Benjamin C Haller, Benjamin Sobkowiak, Melanie H Chitwood, Caroline Colijn, Ted Cohen, Kyu Y Rhee, Philipp W Messer, Martin T Wells, Andrew G Clark, Jaehee Kim
e3SIM: epidemiological-ecological-evolutionary simulation framework for genomic epidemiology. bioRxiv : the preprint server for biology (2024)
Peiyu Xu, Shenni Liang, Andrew Hahn, Vivian Zhao, Wai Tung 'Jack' Lo, Benjamin C Haller, Benjamin Sobkowiak, Melanie H Chitwood, Caroline Colijn, Ted Cohen, Kyu Y Rhee, Philipp W Messer, Martin T Wells, Andrew G Clark, Jaehee Kim
e3SIM: epidemiological-ecological-evolutionary simulation framework for genomic epidemiology. bioRxiv : the preprint server for biology (2024)
Anna C Clark, Alana Alexander, Rey Edison, Kevin M Esvelt, Sebastian Kamau, Ludovic Dutoit, Jackson Champer, Samuel E Champer, Philipp W Messer, Neil J Gemmell
A framework for identifying fertility gene targets for mammalian pest control. bioRxiv : the preprint server for biology (2023)
Jaehee Kim, Keith D Harris, Isabel K Kim, Shahar Shemesh, Philipp W Messer, Gili Greenbaum
Incorporating ecology into gene drive modelling. Ecology letters (2023)
Emily Yang, Matthew Metzloff, Anna Maria Langmüller, Xuejiao Xu, Andrew G Clark, Philipp W Messer, Jackson Champer
A homing suppression gene drive with multiplexed gRNAs maintains high drive conversion efficiency and avoids functional resistance alleles. G3 (Bethesda, Md.) 12 (6) (2022)
Runxi Shen, Philipp W Messer
Predicting the genomic resolution of bulk segregant analysis. G3 (Bethesda, Md.) 12 (3) (2022)
Anna Maria Langmüller, Jackson Champer, Sandra Lapinska, Lin Xie, Matthew Metzloff, Samuel E Champer, Jingxian Liu, Yineng Xu, Jie Du, Andrew G Clark, Philipp W Messer
Fitness effects of CRISPR endonucleases in Drosophila melanogaster populations. eLife 11 (2022)
Samuel E Champer, Isabel K Kim, Andrew G Clark, Philipp W Messer, Jackson Champer
Anopheles homing suppression drive candidates exhibit unexpected performance differences in simulations with spatial structure. eLife 11 (2022)
Anyi Mazo-Vargas, Anna Maria Langmüller, Alexis Wilder, Karin R L van der Burg, James J Lewis, Philipp W Messer, Linlin Zhang, Arnaud Martin, Robert D Reed
Deep cis-regulatory homology of the butterfly wing pattern ground plan. Science (New York, N.Y.) 378 (6617) (2022)
Nandita R Garud, Philipp W Messer, Dmitri A Petrov
Detection of hard and soft selective sweeps from Drosophila melanogaster population genomic data. PLoS genetics 17 (2) (2021)
Jeffrey R Adrion, Christopher B Cole, Noah Dukler, Jared G Galloway, Ariella L Gladstein, Graham Gower, Christopher C Kyriazis, Aaron P Ragsdale, Georgia Tsambos, Franz Baumdicker, Jedidiah Carlson, Reed A Cartwright, Arun Durvasula, Zehavit Leibovich, Bernard Y Kim, Patrick McKenzie, Philipp W Messer, Ekaterina Noskova, Diego Ortega-Del Vecchyo, Fernando Racimo, Travis J Struck, Simon Gravel, Ryan N Gutenkunst, Kirk E Lohmueller, Peter L Ralph, Daniel R Schrider, Adam C Siepel, Jerome Kelleher, Andrew D Kern
A community-maintained standard library of population genetic models. eLife 9 (2020)
Jackson Champer, Samuel E Champer, Isabel K Kim, Andrew G Clark, Philipp W Messer
Design and analysis of CRISPR-based underdominance toxin-antidote gene drives. Evolutionary applications 14 (4) (2020)
Jackson Champer, Emily Yang, Esther Lee, Jingxian Liu, Andrew G Clark, Philipp W Messer
A CRISPR homing gene drive targeting a haplolethal gene removes resistance alleles and successfully spreads through a cage population. Proceedings of the National Academy of Sciences of the United States of America 117 (39) (2020)
Samuel E Champer, Suh Yeon Oh, Chen Liu, Zhaoxin Wen, Andrew G Clark, Philipp W Messer, Jackson Champer
Computational and experimental performance of CRISPR homing gene drive strategies with multiplexed gRNAs. Science advances 6 (10) (2020)
Jackson Champer, Esther Lee, Emily Yang, Chen Liu, Andrew G Clark, Philipp W Messer
A toxin-antidote CRISPR gene drive system for regional population modification. Nature communications 11 (1) (2020)
Runyang Nicolas Lou, Nina Overgaard Therkildsen, Philipp W Messer
The Effects of Quantitative Trait Architecture on Detection Power in Short-Term Artificial Selection Experiments. G3 (Bethesda, Md.) 10 (9) (2020)
Jackson Champer, Zhaoxin Wen, Anisha Luthra, Riona Reeves, Joan Chung, Chen Liu, Yoo Lim Lee, Jingxian Liu, Emily Yang, Philipp W Messer, Andrew G Clark
CRISPR Gene Drive Efficiency and Resistance Rate Is Highly Heritable with No Common Genetic Loci of Large Effect. Genetics 212 (1) (2019)
Jackson Champer, Joan Chung, Yoo Lim Lee, Chen Liu, Emily Yang, Zhaoxin Wen, Andrew G Clark, Philipp W Messer
Molecular safeguarding of CRISPR gene drive experiments. eLife 8 (2019)
Jingxian Liu, Jackson Champer, Anna Maria Langmüller, Chen Liu, Joan Chung, Riona Reeves, Anisha Luthra, Yoo Lim Lee, Andrew H Vaughn, Andrew G Clark, Philipp W Messer
Maximum Likelihood Estimation of Fitness Components in Experimental Evolution. Genetics 211 (3) (2019)
Benjamin C Haller, Jared Galloway, Jerome Kelleher, Philipp W Messer, Peter L Ralph
Tree-sequence recording in SLiM opens new horizons for forward-time simulation of whole genomes. Molecular ecology resources 19 (2) (2019)
Jackson Champer, Jingxian Liu, Suh Yeon Oh, Riona Reeves, Anisha Luthra, Nathan Oakes, Andrew G Clark, Philipp W Messer
Reducing resistance allele formation in CRISPR gene drive. Proceedings of the National Academy of Sciences of the United States of America 115 (21) (2018)
Nicholas R Polato, Brian A Gill, Alisha A Shah, Miranda M Gray, Kayce L Casner, Antoine Barthelet, Philipp W Messer, Mark P Simmons, Juan M Guayasamín, Andrea C Encalada, Boris C Kondratieff, Alexander S Flecker, Steven A Thomas, Cameron K Ghalambor, N LeRoy Poff, W Chris Funk, Kelly Raquel Zamudio
Narrow thermal tolerance and low dispersal drive higher speciation in tropical mountains. Proceedings of the National Academy of Sciences of the United States of America 115 (49) (2018)
Jackson Champer, Riona Reeves, Suh Yeon Oh, Chen Liu, Jingxian Liu, Andrew G Clark, Philipp W Messer
Novel CRISPR/Cas9 gene drive constructs reveal insights into mechanisms of resistance allele formation and drive efficiency in genetically diverse populations. PLoS genetics 13 (7) (2017)
Benjamin C Haller, Philipp W Messer
asymptoticMK: A Web-Based Tool for the Asymptotic McDonald-Kreitman Test. G3 (Bethesda, Md.) 7 (5) (2017)
Robert L Unckless, Andrew G Clark, Philipp W Messer
Evolution of Resistance Against CRISPR/Cas9 Gene Drive. Genetics 205 (2) (2016)
Robert L Unckless, Philipp W Messer, Tim Connallon, Andrew G Clark
Modeling the Manipulation of Natural Populations by the Mutagenic Chain Reaction. Genetics 201 (2) (2015)

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Publication Activity (10 Years)

Top Topics

Top Venues

Philipp W Messer