Samuel K Sheppard

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 14

Top Topics

Escherichia Coli

Antimicrobial Resistance

Cystic Fibrosis

Top Venues

Antibiotics (Basel, Switzerland)

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Aidan J Taylor, Koji Yahara, Ben Pascoe, Seungwon Ko, Leonardos Mageiros, Evangelos Mourkas, Jessica K Calland, Santeri Puranen, Matthew D Hitchings, Keith A Jolley, Carolin M Kobras, Sion Bayliss, Nicola J Williams, Arnoud H M van Vliet, Julian Parkhill, Martin Christopher James Maiden, Jukka Corander, Laurence D Hurst, Daniel Falush, Paul S Keim, Xavier Didelot, David J Kelly, Samuel K Sheppard
Epistasis, core-genome disharmony, and adaptation in recombining bacteria. mBio 15 (6) (2024)
Aidan J Taylor, Koji Yahara, Ben Pascoe, Seungwon Ko, Leonardos Mageiros, Evangelos Mourkas, Jessica K Calland, Santeri Puranen, Matthew D Hitchings, Keith A Jolley, Carolin M Kobras, Sion Bayliss, Nicola J Williams, Arnoud H M van Vliet, Julian Parkhill, Martin Christopher James Maiden, Jukka Corander, Laurence D Hurst, Daniel Falush, Paul S Keim, Xavier Didelot, David J Kelly, Samuel K Sheppard
Epistasis, core-genome disharmony, and adaptation in recombining bacteria. mBio (2024)
Biel Garcias, Mayra Alejandra Flores, Mercedes Fernández, William Monteith, Ben Pascoe, Samuel K Sheppard, Margarita Martín, Martí Cortey, Laila Darwich
Global Variation in Escherichia coli mcr-1 Genes and Plasmids from Animal and Human Genomes Following Colistin Usage Restrictions in Livestock. Antibiotics (Basel, Switzerland) 13 (8) (2024)
Aidan J Taylor, Koji Yahara, Ben Pascoe, Seungwon Ko, Leonardos Mageiros, Evangelos Mourkas, Jessica K Calland, Santeri Puranen, Matthew D Hitchings, Keith A Jolley, Carolin M Kobras, Sion Bayliss, Nicola J Williams, Arnoud H M van Vliet, Julian Parkhill, Martin Christopher James Maiden, Jukka Corander, Laurence D Hurst, Daniel Falush, Paul S Keim, Xavier Didelot, David J Kelly, Samuel K Sheppard
Epistasis, core-genome disharmony, and adaptation in recombining bacteria. mBio 15 (6) (2024)
Aidan J Taylor, Koji Yahara, Ben Pascoe, Seungwon Ko, Leonardos Mageiros, Evangelos Mourkas, Jessica K Calland, Santeri Puranen, Matthew D Hitchings, Keith A Jolley, Carolin M Kobras, Sion Bayliss, Nicola J Williams, Arnoud H M van Vliet, Julian Parkhill, Martin Christopher James Maiden, Jukka Corander, Laurence D Hurst, Daniel Falush, Paul S Keim, Xavier Didelot, David J Kelly, Samuel K Sheppard
Epistasis, core-genome disharmony, and adaptation in recombining bacteria. mBio 15 (6) (2024)
Biel Garcias, Mayra Alejandra Flores, Mercedes Fernández, William Monteith, Ben Pascoe, Samuel K Sheppard, Margarita Martín, Martí Cortey, Laila Darwich
Global Variation in Escherichia coli mcr-1 Genes and Plasmids from Animal and Human Genomes Following Colistin Usage Restrictions in Livestock. Antibiotics (Basel, Switzerland) 13 (8) (2024)
Carolin M Kobras, William Monteith, Sophie Somerville, James M Delaney, Imran Khan, Camilla Brimble, Rebecca M Corrigan, Samuel K Sheppard, Andrew K Fenton
Loss of Pde1 function acts as an evolutionary gateway to penicillin resistance in Streptococcus pneumoniae . Proceedings of the National Academy of Sciences of the United States of America 120 (41) (2023)
Shenghan Cai, Na Wang, Like Xu, Fei Yan, Qingwu Jiang, Xinping Zhao, Wei Wang, Hexing Wang, Lufang Jiang, Wenjuan Cong, Samuel K Sheppard, Jason Weeks, Barbara Kasprzyk-Hordern, Chaowei Fu, Helen Lambert
Impacts of Antibiotic Residues in the Environment on Bacterial Resistance and Human Health in Eastern China: An Interdisciplinary Mixed-Methods Study Protocol. International journal of environmental research and public health 19 (13) (2022)
Evangelos Mourkas, Koji Yahara, Sion C Bayliss, Jessica K Calland, Håkan Johansson, Leonardos Mageiros, Zilia Y Muñoz-Ramírez, Grant Futcher, Guillaume Méric, Matthew D Hitchings, Santiago Sandoval-Motta, Javier Torres, Keith A Jolley, Martin Christopher James Maiden, Patrik Ellström, Jonas Waldenström, Ben Pascoe, Samuel K Sheppard
Host ecology regulates interspecies recombination in bacteria of the genus Campylobacter . eLife 11 (2022)
Leonardos Mageiros, Guillaume Méric, Sion C Bayliss, Johan Pensar, Ben Pascoe, Evangelos Mourkas, Jessica K Calland, Koji Yahara, Susan Murray, Thomas S Wilkinson, Lisa K Williams, Matthew D Hitchings, Jonathan Porter, Kirsty Kemmett, Edward J Feil, Keith A Jolley, Nicola J Williams, Jukka Corander, Samuel K Sheppard
Author Correction: Genome evolution and the emergence of pathogenicity in avian Escherichia coli. Nature communications 12 (1) (2021)
Jessica K Calland, Ben Pascoe, Sion C Bayliss, Evangelos Mourkas, Elvire Berthenet, Harry A Thorpe, Matthew D Hitchings, Edward J Feil, Jukka Corander, Martin J Blaser, Daniel Falush, Samuel K Sheppard
Quantifying bacterial evolution in the wild: A birthday problem for Campylobacter lineages. PLoS genetics 17 (9) (2021)
Leonardos Mageiros, Guillaume Méric, Sion C Bayliss, Johan Pensar, Ben Pascoe, Evangelos Mourkas, Jessica K Calland, Koji Yahara, Susan Murray, Thomas S Wilkinson, Lisa K Williams, Matthew D Hitchings, Jonathan Porter, Kirsty Kemmett, Edward J Feil, Keith A Jolley, Nicola J Williams, Jukka Corander, Samuel K Sheppard
Genome evolution and the emergence of pathogenicity in avian Escherichia coli. Nature communications 12 (1) (2021)
Nicolas Arning, Samuel K Sheppard, Sion C Bayliss, David A Clifton, Daniel J Wilson
Machine learning to predict the source of campylobacteriosis using whole genome data. PLoS genetics 17 (10) (2021)
Carolin M Kobras, Andrew K Fenton, Samuel K Sheppard
Next-generation microbiology: from comparative genomics to gene function. Genome biology 22 (1) (2021)