Samuel Schwartz Minot (Samuel S Minot, Samuel Minot)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 23

Top Venues

Nature

medRxiv : the preprint server for health sciences

BMC bioinformatics

PeerJ

Fred Hutch

University of Pennsylvania (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Fred Hutch Sep 01 2017

United States

Scientist :: VIDD

One Codex Apr 01 2015 - Aug 01 2017

United States

Principal Scientist

Education History

University of Pennsylvania Jul 01 2009 - Apr 01 2012

United States

PHD :: Cell and Molecular Biology

Publications

Martha Zepeda-Rivera, Samuel Schwartz Minot, Heather Bouzek, Hanrui Wu, Aitor Blanco-Míguez, Paolo Manghi, Dakota S Jones, Kaitlyn D LaCourse, Ying Wu, Elsa F McMahon, Soon-Nang Park, Yun K Lim, Andrew G Kempchinsky, Amy D Willis, Sean L Cotton, Susan C Yost, Ewa Sicinska, Joong-Ki Kook, Floyd E Dewhirst, Nicola Segata, Susan Bullman, Christopher D Johnston
A distinct Fusobacterium nucleatum clade dominates the colorectal cancer niche. Nature (2024)
Martha Zepeda-Rivera, Samuel Schwartz Minot, Heather Bouzek, Hanrui Wu, Aitor Blanco-Míguez, Paolo Manghi, Dakota S Jones, Kaitlyn D LaCourse, Ying Wu, Elsa F McMahon, Soon-Nang Park, Yun K Lim, Andrew G Kempchinsky, Amy D Willis, Sean L Cotton, Susan C Yost, Ewa Sicinska, Joong-Ki Kook, Floyd E Dewhirst, Nicola Segata, Susan Bullman, Christopher D Johnston
A distinct Fusobacterium nucleatum clade dominates the colorectal cancer niche. Nature 628 (8007) (2024)
Martha Zepeda-Rivera, Samuel Schwartz Minot, Heather Bouzek, Hanrui Wu, Aitor Blanco-Míguez, Paolo Manghi, Dakota S Jones, Kaitlyn D LaCourse, Ying Wu, Elsa F McMahon, Soon-Nang Park, Yun K Lim, Andrew G Kempchinsky, Amy D Willis, Sean L Cotton, Susan C Yost, Ewa Sicinska, Joong-Ki Kook, Floyd E Dewhirst, Nicola Segata, Susan Bullman, Christopher D Johnston
A distinct Fusobacterium nucleatum clade dominates the colorectal cancer niche. Nature (2024)
Martha Zepeda-Rivera, Samuel Schwartz Minot, Heather Bouzek, Hanrui Wu, Aitor Blanco-Míguez, Paolo Manghi, Dakota S Jones, Kaitlyn D LaCourse, Ying Wu, Elsa F McMahon, Soon-Nang Park, Yun K Lim, Andrew G Kempchinsky, Amy D Willis, Sean L Cotton, Susan C Yost, Ewa Sicinska, Joong-Ki Kook, Floyd E Dewhirst, Nicola Segata, Susan Bullman, Christopher D Johnston
A distinct Fusobacterium nucleatum clade dominates the colorectal cancer niche. Nature (2024)
Martha Zepeda-Rivera, Samuel Schwartz Minot, Heather Bouzek, Hanrui Wu, Aitor Blanco-Míguez, Paolo Manghi, Dakota S Jones, Kaitlyn D LaCourse, Ying Wu, Elsa F McMahon, Soon-Nang Park, Yun K Lim, Andrew G Kempchinsky, Amy D Willis, Sean L Cotton, Susan C Yost, Ewa Sicinska, Joong-Ki Kook, Floyd E Dewhirst, Nicola Segata, Susan Bullman, Christopher D Johnston
A distinct Fusobacterium nucleatum clade dominates the colorectal cancer niche. Nature (2024)
Martha Zepeda-Rivera, Samuel Schwartz Minot, Heather Bouzek, Hanrui Wu, Aitor Blanco-Míguez, Paolo Manghi, Dakota S Jones, Kaitlyn D LaCourse, Ying Wu, Elsa F McMahon, Soon-Nang Park, Yun K Lim, Andrew G Kempchinsky, Amy D Willis, Sean L Cotton, Susan C Yost, Ewa Sicinska, Joong-Ki Kook, Floyd E Dewhirst, Nicola Segata, Susan Bullman, Christopher D Johnston
A distinct Fusobacterium nucleatum clade dominates the colorectal cancer niche. Nature 628 (8007) (2024)
Martha Zepeda-Rivera, Samuel Schwartz Minot, Heather Bouzek, Hanrui Wu, Aitor Blanco-Míguez, Paolo Manghi, Dakota S Jones, Kaitlyn D LaCourse, Ying Wu, Elsa F McMahon, Soon-Nang Park, Yun K Lim, Andrew G Kempchinsky, Amy D Willis, Sean L Cotton, Susan C Yost, Ewa Sicinska, Joong-Ki Kook, Floyd E Dewhirst, Nicola Segata, Susan Bullman, Christopher D Johnston
A distinct Fusobacterium nucleatum clade dominates the colorectal cancer niche. Nature 628 (8007) (2024)
Martha Zepeda-Rivera, Samuel Schwartz Minot, Heather Bouzek, Hanrui Wu, Aitor Blanco-Míguez, Paolo Manghi, Dakota S Jones, Kaitlyn D LaCourse, Ying Wu, Elsa F McMahon, Soon-Nang Park, Yun K Lim, Andrew G Kempchinsky, Amy D Willis, Sean L Cotton, Susan C Yost, Ewa Sicinska, Joong-Ki Kook, Floyd E Dewhirst, Nicola Segata, Susan Bullman, Christopher D Johnston
A distinct Fusobacterium nucleatum clade dominates the colorectal cancer niche. Nature 628 (8007) (2024)
Martha Zepeda-Rivera, Samuel Schwartz Minot, Heather Bouzek, Hanrui Wu, Aitor Blanco-Míguez, Paolo Manghi, Dakota S Jones, Kaitlyn D LaCourse, Ying Wu, Elsa F McMahon, Soon-Nang Park, Yun K Lim, Andrew G Kempchinsky, Amy D Willis, Sean L Cotton, Susan C Yost, Ewa Sicinska, Joong-Ki Kook, Floyd E Dewhirst, Nicola Segata, Susan Bullman, Christopher D Johnston
A distinct Fusobacterium nucleatum clade dominates the colorectal cancer niche. Nature 628 (8007) (2024)
Martha Zepeda-Rivera, Samuel Schwartz Minot, Heather Bouzek, Hanrui Wu, Aitor Blanco-Míguez, Paolo Manghi, Dakota S Jones, Kaitlyn D LaCourse, Ying Wu, Elsa F McMahon, Soon-Nang Park, Yun K Lim, Andrew G Kempchinsky, Amy D Willis, Sean L Cotton, Susan C Yost, Ewa Sicinska, Joong-Ki Kook, Floyd E Dewhirst, Nicola Segata, Susan Bullman, Christopher D Johnston
A distinct Fusobacterium nucleatum clade dominates the colorectal cancer niche. Nature 628 (8007) (2024)
Samuel Schwartz Minot, Koshlan Mayer-Blackwell, Andrew-Fiore Gartland, Andrew Johnson, Steven Self, Parveen Bhatti, Lena Yao, Lili Liu, Xin Sun, Yi Jinfa, James G Kublin
Strain-level characterization of health-associated bacterial consortia that colonize the human gut during infancy. medRxiv : the preprint server for health sciences (2023)
Samuel Schwartz Minot, Koshlan Mayer-Blackwell, Andrew-Fiore Gartland, Andrew Johnson, Steven Self, Parveen Bhatti, Lena Yao, Lili Liu, Xin Sun, Yi Jinfa, James G Kublin
Strain-level characterization of health-associated bacterial consortia that colonize the human gut during infancy. medRxiv : the preprint server for health sciences (2023)
Samuel Schwartz Minot, Koshlan Mayer-Blackwell, Andrew-Fiore Gartland, Andrew Johnson, Steven Self, Parveen Bhatti, Lena Yao, Lili Liu, Xin Sun, Yi Jinfa, James G Kublin
Strain-level characterization of health-associated bacterial consortia that colonize the human gut during infancy. medRxiv : the preprint server for health sciences (2023)
Andrew M F Johnson, Kevin Hager, Mohamad-Gabriel Alameh, Phuong Van, Nicole Potchen, Koshlan Mayer-Blackwell, Andrew Fiore-Gartland, Samuel Schwartz Minot, Paulo J C Lin, Ying K Tam, Drew Weissman, James G Kublin
The Regulation of Nucleic Acid Vaccine Responses by the Microbiome. bioRxiv : the preprint server for biology (2023)
Samuel Schwartz Minot, Koshlan Mayer-Blackwell, Andrew-Fiore Gartland, Andrew Johnson, Steven Self, Parveen Bhatti, Lena Yao, Lili Liu, Xin Sun, Yi Jinfa, James G Kublin
Strain-level characterization of health-associated bacterial consortia that colonize the human gut during infancy. medRxiv : the preprint server for health sciences (2023)
Samuel Schwartz Minot, Koshlan Mayer-Blackwell, Andrew-Fiore Gartland, Andrew Johnson, Steven Self, Parveen Bhatti, Lena Yao, Lili Liu, Xin Sun, Yi Jinfa, James G Kublin
Strain-level characterization of health-associated bacterial consortia that colonize the human gut during infancy. medRxiv : the preprint server for health sciences (2023)
Pande Putu Erawijantari, Ece Kartal, José Liñares-Blanco, Teemu Daniel Laajala, Lily Elizabeth Feldman, null null, Pedro Carmona-Saez, Rajesh Shigdel, Marcus Joakim Claesson, Randi Jacobsen Bertelsen, David-Gómez Cabrero, Samuel Schwartz Minot, Jacob Albrecht, Verena Chung, Michael Inouye, Pekka Jousilahti, Jobst-Hendrik Schultz, Hans Christoph Friederich, Rob Knight, Veikko V Salomaa, Teemu J Niiranen, Aki Samuli Havulinna, Julio Saez-Rodriguez, Rebecca T Levinson, Leo Lahti
Microbiome-based risk prediction in incident heart failure: a community challenge. medRxiv : the preprint server for health sciences (2023)
Andrew M F Johnson, Kevin Hager, Mohamad Gabriel Alameh, Phuong Van, Nicole B Potchen, Koshlan Mayer-Blackwell, Andrew Fiore-Gartland, Samuel Schwartz Minot, Paulo J C Lin, Ying K Tam, Drew Weissman, James G Kublin
The Regulation of Nucleic Acid Vaccine Responses by the Microbiome. Journal of immunology (Baltimore, Md. : 1950) (2023)
Jorge Luis Galeano Niño, Hanrui Wu, Kaitlyn D LaCourse, Andrew G Kempchinsky, Alexander Baryiames, Brittany Barber, Neal Futran, Jeffrey Houlton, Cassie Sather, Ewa Sicinska, Alison Taylor, Samuel Schwartz Minot, Christopher D Johnston, Susan Bullman
Effect of the intratumoral microbiota on spatial and cellular heterogeneity in cancer. Nature 611 (7937) (2022)
Samuel Schwartz Minot, Kevin C Barry, Caroline Kasman, Jonathan L Golob, Amy D Willis
geneshot: gene-level metagenomics identifies genome islands associated with immunotherapy response. Genome biology 22 (1) (2021)
Jonathan Louis Golob, Samuel Schwartz Minot
In silico benchmarking of metagenomic tools for coding sequence detection reveals the limits of sensitivity and precision. BMC bioinformatics 21 (1) (2020)
Samuel Schwartz Minot, Amy D Willis
Clustering co-abundant genes identifies components of the gut microbiome that are reproducibly associated with colorectal cancer and inflammatory bowel disease. Microbiome 7 (1) (2019)
Geoffrey D Hannigan, Qi Zheng, Jacquelyn S Meisel, Samuel Schwartz Minot, Frederick D Bushman, Elizabeth A Grice
Evolutionary and functional implications of hypervariable loci within the skin virome. PeerJ 5 (2017)

Samuel Schwartz Minot.css-eqlu8i{font-size:small;padding-left:4px;} (Samuel S Minot, Samuel Minot)

Publication Activity (10 Years)

Top Topics

Top Venues

Samuel Schwartz Minot (Samuel S Minot, Samuel Minot)