Senjie Lin

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 62

Top Venues

Applied and environmental microbiology

Nature communications

Microbiology spectrum

Microorganisms

University of Connecticut Avery Point

Stony Brook University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Connecticut Avery Point Aug 15 2009

United States

Professor :: Department of Marine Sciecnes

University of Connecticut Avery Point Aug 15 2005 - Aug 14 2009

United States

Associate Professor :: Department of Marine Sciences

University of Connecticut Avery Point Aug 15 1999 - Aug 14 2005

United States

Assistant Professor :: Department of Marine Sciences

Education History

Stony Brook University Sep 01 1990 - Jul 15 1995

United States

PHD :: Marine Sciences Research Center

Publications

Cong Wang, Jiashun Li, Sihan Li, Senjie Lin
Effects and mechanisms of glyphosate as phosphorus nutrient on element stoichiometry and metabolism in the diatom Phaeodactylum tricornutum . Applied and environmental microbiology 90 (2) (2024)
Hao Zhang, Xin Wang, Meng Qu, Haiyan Yu, Jianping Yin, Xiaochuan Liu, Yuhong Liu, Bo Zhang, Yanhong Zhang, Zhangliang Wei, Fangfang Yang, Jingtian Wang, Chengcheng Shi, Guangyi Fan, Jun Sun, Lijuan Long, David A Hutchins, Chris Bowler, Senjie Lin, Da-Zhi Wang, Qiang Lin
Genome of Halimeda opuntia reveals differentiation of subgenomes and molecular bases of multinucleation and calcification in algae. Proceedings of the National Academy of Sciences of the United States of America 121 (39) (2024)
Jiamin He, Yulin Huang, Ling Li, Sitong Lin, Minglei Ma, Yujie Wang, Senjie Lin
Novel Plastid Genome Characteristics in Fugacium kawagutii and the Trend of Accelerated Evolution of Plastid Proteins in Dinoflagellates. Genome biology and evolution 16 (1) (2024)
Cong Wang, Jiashun Li, Sihan Li, Senjie Lin
Effects and mechanisms of glyphosate as phosphorus nutrient on element stoichiometry and metabolism in the diatom Phaeodactylum tricornutum . Applied and environmental microbiology 90 (2) (2024)
Senjie Lin, Shuaishuai Wu, Jiamin He, Xiaoyu Wang, Arthur R Grossman
Shining light on dinoflagellate photosystem I. Nature communications 15 (1) (2024)
Sitong Lin, Ling Li, Zhi Zhou, Huatao Yuan, Osama S Saad, Jia Tang, Wenqi Cai, Kefu Yu, Senjie Lin
Higher genotypic diversity and distinct assembly mechanism of free-living Symbiodiniaceae assemblages than sympatric coral-endosymbiotic assemblages in a tropical coral reef. Microbiology spectrum (2024)
Hongfei Li, Jian-Wei Chen, Liying Yu, Guangyi Fan, Tangcheng Li, Ling Li, Huatao Yuan, Jingtian Wang, Cong Wang, Denghui Li, Senjie Lin
In situ community transcriptomics illuminates CO 2 -fixation potentials and supporting roles of phagotrophy and proton pump in plankton in a subtropical marginal sea. Microbiology spectrum 12 (3) (2024)
Cong Wang, Jiashun Li, Sihan Li, Senjie Lin
Effects and mechanisms of glyphosate as phosphorus nutrient on element stoichiometry and metabolism in the diatom Phaeodactylum tricornutum . Applied and environmental microbiology 90 (2) (2024)
Cong Wang, Jiashun Li, Sihan Li, Senjie Lin
Effects and mechanisms of glyphosate as phosphorus nutrient on element stoichiometry and metabolism in the diatom Phaeodactylum tricornutum . Applied and environmental microbiology 90 (2) (2024)
Sitong Lin, Ling Li, Zhi Zhou, Huatao Yuan, Osama S Saad, Jia Tang, Wenqi Cai, Kefu Yu, Senjie Lin
Higher genotypic diversity and distinct assembly mechanism of free-living Symbiodiniaceae assemblages than sympatric coral-endosymbiotic assemblages in a tropical coral reef. Microbiology spectrum 12 (8) (2024)
Hongfei Li, Jian-Wei Chen, Liying Yu, Guangyi Fan, Tangcheng Li, Ling Li, Huatao Yuan, Jingtian Wang, Cong Wang, Denghui Li, Senjie Lin
In situ community transcriptomics illuminates CO 2 -fixation potentials and supporting roles of phagotrophy and proton pump in plankton in a subtropical marginal sea. Microbiology spectrum (2024)
Jiashun Li, Shuaishuai Wu, Kaidian Zhang, Xueqiong Sun, Wenwen Lin, Cong Wang, Senjie Lin
Clustered Regularly Interspaced Short Palindromic Repeat/CRISPR-Associated Protein and Its Utility All at Sea: Status, Challenges, and Prospects. Microorganisms 12 (1) (2024)
Cong Wang, Jiashun Li, Sihan Li, Senjie Lin
Effects and mechanisms of glyphosate as phosphorus nutrient on element stoichiometry and metabolism in the diatom Phaeodactylum tricornutum . Applied and environmental microbiology 90 (2) (2024)
Senjie Lin, Shuaishuai Wu, Jiamin He, Xiaoyu Wang, Arthur R Grossman
Shining light on dinoflagellate photosystem I. Nature communications 15 (1) (2024)
Senjie Lin, Shuaishuai Wu, Jiamin He, Xiaoyu Wang, Arthur R Grossman
Shining light on dinoflagellate photosystem I. Nature communications 15 (1) (2024)
Hongfei Li, Jian-Wei Chen, Liying Yu, Guangyi Fan, Tangcheng Li, Ling Li, Huatao Yuan, Jingtian Wang, Cong Wang, Denghui Li, Senjie Lin
In situ community transcriptomics illuminates CO 2 -fixation potentials and supporting roles of phagotrophy and proton pump in plankton in a subtropical marginal sea. Microbiology spectrum 12 (3) (2024)
Cong Wang, Jiashun Li, Sihan Li, Senjie Lin
Effects and mechanisms of glyphosate as phosphorus nutrient on element stoichiometry and metabolism in the diatom Phaeodactylum tricornutum . Applied and environmental microbiology 90 (2) (2024)
Jiashun Li, Shuaishuai Wu, Kaidian Zhang, Xueqiong Sun, Wenwen Lin, Cong Wang, Senjie Lin
Clustered Regularly Interspaced Short Palindromic Repeat/CRISPR-Associated Protein and Its Utility All at Sea: Status, Challenges, and Prospects. Microorganisms 12 (1) (2024)
Jiamin He, Yulin Huang, Ling Li, Sitong Lin, Minglei Ma, Yujie Wang, Senjie Lin
Novel Plastid Genome Characteristics in Fugacium kawagutii and the Trend of Accelerated Evolution of Plastid Proteins in Dinoflagellates. Genome biology and evolution 16 (1) (2024)
Hongfei Li, Jian-Wei Chen, Liying Yu, Guangyi Fan, Tangcheng Li, Ling Li, Huatao Yuan, Jingtian Wang, Cong Wang, Denghui Li, Senjie Lin
In situ community transcriptomics illuminates CO 2 -fixation potentials and supporting roles of phagotrophy and proton pump in plankton in a subtropical marginal sea. Microbiology spectrum 12 (3) (2024)
Cong Wang, Jiashun Li, Sihan Li, Senjie Lin
Effects and mechanisms of glyphosate as phosphorus nutrient on element stoichiometry and metabolism in the diatom Phaeodactylum tricornutum . Applied and environmental microbiology 90 (2) (2024)
Xinguo Shi, Yazhen Zou, Yingjiao Zhang, Guangmao Ding, Yuchun Xiao, Senjie Lin, Jianfeng Chen
Salinity decline promotes growth and harmful blooms of a toxic alga by diverting carbon flow. Global change biology 30 (6) (2024)
Huan Zhang, Kelly J Nulick, Zair Burris, Melissa Pierce, Minglei Ma, Senjie Lin
Dinoflagellate Proton-Pump Rhodopsin Genes in Long Island Sound: Diversity and Spatiotemporal Distribution. Microorganisms 12 (3) (2024)
Jiashun Li, Shuaishuai Wu, Kaidian Zhang, Xueqiong Sun, Wenwen Lin, Cong Wang, Senjie Lin
Clustered Regularly Interspaced Short Palindromic Repeat/CRISPR-Associated Protein and Its Utility All at Sea: Status, Challenges, and Prospects. Microorganisms 12 (1) (2024)
Cong Wang, Jiashun Li, Sihan Li, Senjie Lin
Effects and mechanisms of glyphosate as phosphorus nutrient on element stoichiometry and metabolism in the diatom Phaeodactylum tricornutum . Applied and environmental microbiology 90 (2) (2024)
Senjie Lin, Shuaishuai Wu, Jiamin He, Xiaoyu Wang, Arthur R Grossman
Shining light on dinoflagellate photosystem I. Nature communications 15 (1) (2024)
Senjie Lin, Shuaishuai Wu, Jiamin He, Xiaoyu Wang, Arthur R Grossman
Shining light on dinoflagellate photosystem I. Nature communications 15 (1) (2024)
Cong Wang, Jiashun Li, Sihan Li, Senjie Lin
Effects and mechanisms of glyphosate as phosphorus nutrient on element stoichiometry and metabolism in the diatom Phaeodactylum tricornutum . Applied and environmental microbiology (2024)
Huan Zhang, Kelly J Nulick, Zair Burris, Melissa Pierce, Minglei Ma, Senjie Lin
Dinoflagellate Proton-Pump Rhodopsin Genes in Long Island Sound: Diversity and Spatiotemporal Distribution. Microorganisms 12 (3) (2024)
Huan Zhang, Kelly J Nulick, Zair Burris, Melissa Pierce, Minglei Ma, Senjie Lin
Dinoflagellate Proton-Pump Rhodopsin Genes in Long Island Sound: Diversity and Spatiotemporal Distribution. Microorganisms 12 (3) (2024)
Sitong Lin, Ling Li, Zhi Zhou, Huatao Yuan, Osama S Saad, Jia Tang, Wenqi Cai, Kefu Yu, Senjie Lin
Higher genotypic diversity and distinct assembly mechanism of free-living Symbiodiniaceae assemblages than sympatric coral-endosymbiotic assemblages in a tropical coral reef. Microbiology spectrum (2024)
Senjie Lin
Phosphate limitation and ocean acidification co-shape phytoplankton physiology and community structure. Nature communications 14 (1) (2023)
Jiashun Li, Kaidian Zhang, Ling Li, Yujie Wang, Senjie Lin
Phosphorus nutrition strategies in a Symbiodiniacean species: Implications in coral-alga symbiosis facing increasing phosphorus deficiency in future warmer oceans. Global change biology (2023)
Minglei Ma, Hongfei Li, Cong Wang, Tangcheng Li, Jierui Wang, Huatao Yuan, Liying Yu, Jingtian Wang, Ling Li, Senjie Lin
A comparative study reveals the relative importance of prokaryotic and eukaryotic proton pump rhodopsins in a subtropical marginal sea. ISME communications 3 (1) (2023)
Jiashun Li, Kaidian Zhang, Ling Li, Yujie Wang, Cong Wang, Senjie Lin
Two-sided effects of the organic phosphorus phytate on a globally important marine coccolithophorid phytoplankton. Microbiology spectrum (2023)
Jiamin He, Yulin Huang, Ling Li, Sitong Lin, Minglei Ma, Yujie Wang, Senjie Lin
Novel plastid genome characteristics in Fugacium kawagutii and the trend of accelerated evolution of plastid proteins in dinoflagellates. Genome biology and evolution (2023)
Liying Yu, Tangcheng Li, Hongfei Li, Minglei Ma, Ling Li, Senjie Lin
In Situ Molecular Ecological Analyses Illuminate Distinct Factors Regulating Formation and Demise of a Harmful Dinoflagellate Bloom. Microbiology spectrum (2023)
Yi Sun, Hongjun Li, Xiaocheng Wang, Yuan Jin, Satoshi Nagai, Senjie Lin
Phytoplankton and Microzooplankton Community Structure and Assembly Mechanisms in Northwestern Pacific Ocean Estuaries with Environmental Heterogeneity and Geographic Segregation. Microbiology spectrum (2023)
Jingtian Wang, Ling Li, Senjie Lin
Active viral infection during blooms of a dinoflagellate indicates dinoflagellate-viral co-adaptation. Applied and environmental microbiology (2023)
Senjie Lin
Phosphate limitation and ocean acidification co-shape phytoplankton physiology and community structure. Nature communications 14 (1) (2023)
Senjie Lin
Phosphate limitation and ocean acidification co-shape phytoplankton physiology and community structure. Nature communications 14 (1) (2023)
Kaidian Zhang, Jiashun Li, Jie Cheng, Senjie Lin
Alkaline Phosphatase PhoD Mutation Induces Fatty Acid and Long-Chain Polyunsaturated Fatty Acid (LC-PUFA)-Bound Phospholipid Production in the Model Diatom Phaeodactylum tricornutum . Marine drugs 21 (11) (2023)
Yanchun You, Xueqiong Sun, Senjie Lin
An ancient enzyme finds a new home: Prevalence and neofunctionalization of trypsin in marine phytoplankton. Journal of phycology (2022)
Lu Zhou, Shan Gao, Wenting Yang, Songcui Wu, Li Huan, Xiujun Xie, Xulei Wang, Senjie Lin, Guangce Wang
Transcriptomic and metabolic signatures of diatom plasticity to light fluctuations. Plant physiology 190 (4) (2022)
Yanchun You, Xueqiong Sun, Minglei Ma, Jiamin He, Ling Li, Felipe Wendt Porto, Senjie Lin
Trypsin is a coordinate regulator of N and P nutrients in marine phytoplankton. Nature communications 13 (1) (2022)
Hao Luo, Jingtian Wang, Joaquim I Goes, Helga do R Gomes, Khalid Al-Hashmi, Craig Tobias, Claudia Koerting, Senjie Lin
A grazing-driven positive nutrient feedback loop and active sexual reproduction underpin widespread Noctiluca green tides. ISME communications 2 (1) (2022)
Kaidian Zhang, Jiashun Li, Jierui Wang, Xin Lin, Ling Li, Yanchun You, Xiaomei Wu, Zhi Zhou, Senjie Lin
Functional differentiation and complementation of alkaline phosphatases and choreography of DOP scavenging in a marine diatom. Molecular ecology 31 (12) (2022)
Jiashun Li, Kaidian Zhang, Xin Lin, Ling Li, Senjie Lin
Phytate as a phosphorus nutrient with impacts on iron stress-related gene expression for phytoplankton: insights from diatom Phaeodactylum tricornutum. Applied and environmental microbiology (2021)
Zhi Zhou, Kaidian Zhang, Lingui Wang, Yilu Su, Jierui Wang, Tingting Song, Xiaohong Yang, Jia Tang, Senjie Lin
Nitrogen availability improves the physiological resilience of coral endosymbiont Cladocopium goreaui to high temperature. Journal of phycology 57 (4) (2021)
Kaidian Zhang, Jiashun Li, Zhi Zhou, Ruiping Huang, Senjie Lin
Roles of Alkaline Phosphatase PhoA in Algal Metabolic Regulation under Phosphorus-replete Conditions. Journal of phycology 57 (3) (2021)
Kaidian Zhang, Zhi Zhou, Jiashun Li, Jingtian Wang, Liying Yu, Senjie Lin
SPX-related genes regulate phosphorus homeostasis in the marine phytoplankton, Phaeodactylum tricornutum. Communications biology 4 (1) (2021)
Rita C Kuo, Huan Zhang, James D Stuart, Anthony A Provatas, Linda Hannick, Senjie Lin
Abundant synthesis of long-chain polyunsaturated fatty acids in Eutreptiella sp. (Euglenozoa) revealed by chromatographic and transcriptomic analyses. Journal of phycology 57 (2) (2021)
Huatao Yuan, Tangcheng Li, Hongfei Li, Cong Wang, Ling Li, Xin Lin, Senjie Lin
Diversity Distribution, Driving Factors and Assembly Mechanisms of Free-Living and Particle-Associated Bacterial Communities at a Subtropical Marginal Sea. Microorganisms 9 (12) (2021)
Senjie Lin, Bo Song, David Morse
Spatial organization of dinoflagellate genomes: Novel insights and remaining critical questions. Journal of phycology 57 (6) (2021)
Drahomíra Faktorová, R Ellen R Nisbet, José A Fernández Robledo, Elena Casacuberta, Lisa Sudek, Andrew Ellis Allen, Manuel Ares, Cristina Aresté, Cecilia Balestreri, Adrian C Barbrook, Patrick Beardslee, Sara Bender, David S Booth, François-Yves Bouget, Chris Bowler, Susana A Breglia, Colin Brownlee, Gertraud Burger, Heriberto Cerutti, Rachele Cesaroni, Miguel A Chiurillo, Thomas Clemente, Duncan B Coles, Jackie L Collier, Elizabeth C Cooney, Kathryn Coyne, Roberto Docampo, Christopher L Dupont, Virginia P Edgcomb, Elin Einarsson, Pía A Elustondo, Fernan Federici, Veronica Freire-Beneitez, Nastasia J Freyria, Kodai Fukuda, Paulo A García, Peter R Girguis, Fatma Gomaa, Sebastian G Gornik, Jian Guo, Vladimír Hampl, Yutaka Hanawa, Esteban R Haro-Contreras, Elisabeth Hehenberger, Andrea Highfield, Yoshihisa Hirakawa, Amanda Hopes, Christopher J Howe, Ian Hu, Jorge Ibañez, Nicholas A T Irwin, Yuu Ishii, Natalia Ewa Janowicz, Adam C Jones, Ambar Kachale, Konomi Fujimura-Kamada, Binnypreet Kaur, Jonathan Z Kaye, Eleanna Kazana, Patrick J Keeling, Nicole King, Lawrence A Klobutcher, Noelia Lander, Imen Lassadi, Zhuhong Li, Senjie Lin, Jean-Claude Lozano, Fulei Luan, Shinichiro Maruyama, Tamara Matute, Cristina Miceli, Jun Minagawa, Mark Moosburner, Sebastián R Najle, Deepak Nanjappa, Isabel C Nimmo, Luke Noble, Anna M G Novák Vanclová, Mariusz Nowacki, Isaac Nuñez, Arnab Pain, Angela Piersanti, Sandra Pucciarelli, Jan Pyrih, Joshua S Rest, Mariana Rius, Deborah Robertson, Albane Ruaud, Iñaki Ruiz-Trillo, Monika A Sigg, Pamela A Silver, Claudio H Slamovits, G Jason Smith, Brittany N Sprecher, Rowena Stern, Estienne C Swart, Anastasios D Tsaousis, Lev M Z Tsypin, Aaron P Turkewitz, Jernej Turnšek, Matus Valach, Valérie Vergé, Peter von Dassow, Tobias von der Haar, Ross F Waller, Lu Wang, Xiaoxue Wen, Glen Wheeler, April Woods, Huan Zhang, Thomas Mock, Alexandra Z Worden, Julius Lukeš
Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature methods 17 (5) (2020)
Feng Yang, Ling Li, Senjie Lin
Methylation Pattern and Expression Dynamics of Methylase and Photosystem Genes Under varying light Intensities in Fugacium kawagutii (Symbiodiniaceae). Journal of phycology 56 (6) (2020)
Brittany N Sprecher, Huan Zhang, Senjie Lin
Nuclear Gene Transformation in the Dinoflagellate Oxyrrhis marina. Microorganisms 8 (1) (2020)
Tangcheng Li, Liying Yu, Bo Song, Yue Song, Ling Li, Xin Lin, Senjie Lin
Genome Improvement and Core Gene Set Refinement of Fugacium kawagutii. Microorganisms 8 (1) (2020)
Xin Lin, Chentao Guo, Ling Li, Tangcheng Li, Senjie Lin
Non-Conventional Metal Ion Cofactor Requirement of Dinoflagellate Alkaline Phosphatase and Translational Regulation by Phosphorus Limitation. Microorganisms 7 (8) (2019)
Alex de Mendoza, Amandine Bonnet, Dulce B Vargas-Landin, Nanjing Ji, Hongfei Li, Feng Yang, Ling Li, Koichi Hori, Jahnvi Pflueger, Sam Buckberry, Hiroyuki Ohta, Nedeljka Rosic, Pascale Lesage, Senjie Lin, Ryan Lister
Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons. Nature communications 9 (1) (2018)
Fernando Gómez, Lu Wang, Senjie Lin
Morphology and molecular phylogeny of epizoic araphid diatoms on marine zooplankton, including Pseudofalcula hyalina gen. & comb. nov. (Fragilariophyceae, Bacillariophyta). Journal of phycology 54 (4) (2018)
Alex de Mendoza, Amandine Bonnet, Dulce B Vargas-Landin, Nanjing Ji, Hongfei Li, Feng Yang, Ling Li, Koichi Hori, Jahnvi Pflueger, Sam Buckberry, Hiroyuki Ohta, Nedeljka Rosic, Pascale Lesage, Senjie Lin, Ryan Lister
Author Correction: Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons. Nature communications 9 (1) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Senjie Lin