Shingo Miyauchi

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 19

Top Topics

Dna Methylation

Top Venues

The New phytologist

Nature communications

The Journal of biological chemistry

Nature ecology & evolution

This page only lists publications with an associated author ORCID identifier.

Publications

Ruben Eichfeld, Lisa K Mahdi, Concetta De Quattro, Laura Armbruster, Asmamaw B Endeshaw, Shingo Miyauchi, Margareta J Hellmann, Stefan Cord-Landwehr, Daniel Peterson, Vasanth R Singan, Kathleen Lail, Emily Savage, Vivian Ng, Igor V Grigoriev, Gregor Langen, Bruno M Moerschbacher, Alga Zuccaro
Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18-CBM5 chitinase to protect their hosts. The New phytologist (2024)
Hyung-Woo Jeon, Hidekazu Iwakawa, Satoshi Naramoto, Cornelia Herrfurth, Nora Gutsche, Titus Schlüter, Junko Kyozuka, Shingo Miyauchi, Ivo Doe Feussner, Sabine Zachgo, Hirofumi Nakagami
Contrasting and conserved roles of NPR pathways in diverged land plant lineages. The New phytologist 243 (6) (2024)
Hyung-Woo Jeon, Hidekazu Iwakawa, Satoshi Naramoto, Cornelia Herrfurth, Nora Gutsche, Titus Schlüter, Junko Kyozuka, Shingo Miyauchi, Ivo Doe Feussner, Sabine Zachgo, Hirofumi Nakagami
Contrasting and conserved roles of NPR pathways in diverged land plant lineages. The New phytologist (2024)
François Maillard, Annegret Kohler, Emmanuelle Morin, Christian Hossann, Shingo Miyauchi, Isabelle Ziegler-Devin, Dominique Gérant, Nicolas Angeli, Anna Lipzen, Keykhosrow Keymanesh, Jenifer Johnson, Kerrie W Barry, Igor V Grigoriev, Francis M Martin, Marc Buée
Functional genomics gives new insights into the ectomycorrhizal degradation of chitin. The New phytologist (2023)
François Maillard, Annegret Kohler, Emmanuelle Morin, Christian Hossann, Shingo Miyauchi, Isabelle Ziegler-Devin, Dominique Gérant, Nicolas Angeli, Anna Lipzen, Keykhosrow Keymanesh, Jenifer Johnson, Kerrie W Barry, Igor V Grigoriev, Francis M Martin, Marc Buée
Functional genomics gives new insights into the ectomycorrhizal degradation of chitin. The New phytologist 238 (2) (2023)
François Maillard, Annegret Kohler, Emmanuelle Morin, Christian Hossann, Shingo Miyauchi, Isabelle Ziegler-Devin, Dominique Gérant, Nicolas Angeli, Anna Lipzen, Keykhosrow Keymanesh, Jenifer Johnson, Kerrie W Barry, Igor V Grigoriev, Francis M Martin, Marc Buée
Functional genomics gives new insights into the ectomycorrhizal degradation of chitin. The New phytologist 238 (2) (2023)
Annie Lebreton, Nianwu Tang, Alan Kuo, Kurt M LaButti, William Andreopoulos, Elodie Drula, Shingo Miyauchi, Kerrie W Barry, Alicia Clum, Anna Lipzen, Daniel Mousain, Vivian Ng, Ran Wang, Yu-Cheng Dai, Bernard Henrissat, Igor V Grigoriev, Alexis Guerin-Laguette, Fu-Qiang Yu, Francis M Martin
Comparative genomics reveals a dynamic genome evolution in the ectomycorrhizal milk-cap (Lactarius) mushrooms. The New phytologist 235 (1) (2022)
Brian P Looney, Shingo Miyauchi, Emmanuelle Morin, Elodie Drula, Pierre Emmanuel Courty, Annegret Kohler, Alan Kuo, Kurt LaButti, Jasmyn Pangilinan, Anna Lipzen, Robert Riley, William Andreopoulos, Guifen He, Jenifer Johnson, Matt Nolan, Andrew Tritt, Kerrie W Barry, Igor V Grigoriev, László G Nagy, David Hibbett, Bernard Henrissat, P Brandon Matheny, Jessy L Labbé, Francis M Martin
Evolutionary transition to the ectomycorrhizal habit in the genomes of a hyper-diverse lineage of mushroom-forming fungi. The New phytologist (2021)
Hayat Hage, Shingo Miyauchi, Máté Virágh, Elodie Drula, Byoungnam Min, Delphine Chaduli, David Navarro, Anne Favel, Manon Norest, Laurence Lesage-Meessen, Balázs Bálint, Zsolt Merényi, Laura de Eugenio, Emmanuelle Morin, Angel T Martínez, Petr Baldrian, Martina Štursová, María Jesús Martínez, Cenek Novotny, Jon K Magnuson, Joey W Spatafora, Sundy Maurice, Jasmyn Pangilinan, Willian Andreopoulos, Kurt LaButti, Hope Hundley, Hyunsoo Na, Alan Kuo, Kerrie Barry, Anna Lipzen, Bernard Henrissat, Robert Riley, Steven Ahrendt, László G Nagy, Igor V Grigoriev, Francis Martin, Marie-Noëlle Rosso
Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay. Environmental microbiology 23 (10) (2021)
Fantin Mesny, Shingo Miyauchi, Thorsten Thiergart, Brigitte Pickel, Lea Atanasova, Magnus Karlsson, Bruno Huettel, Kerrie W Barry, Sajeet Haridas, Cindy Chen, Diane Bauer, William Andreopoulos, Jasmyn Pangilinan, Kurt M LaButti, Robert Riley, Anna Lipzen, Alicia Clum, Elodie Drula, Bernard Henrissat, Annegret Kohler, Igor V Grigoriev, Francis M Martin, Stéphane Hacquard
Genetic determinants of endophytism in the Arabidopsis root mycobiome. Nature communications 12 (1) (2021)
Lisa K Mahdi, Shingo Miyauchi, Charles Uhlmann, Ruben Garrido-Oter, Gregor Langen, Stephan Wawra, Yulong Niu, Rui Guan, Senga Robertson-Albertyn, Davide Bulgarelli, Jane E Parker, Alga Zuccaro
The fungal root endophyte Serendipita vermifera displays inter-kingdom synergistic beneficial effects with the microbiota in Arabidopsis thaliana and barley. The ISME journal (2021)
Gang Wu, Shingo Miyauchi, Emmanuelle Morin, Alan Kuo, Elodie Drula, Torda Varga, Annegret Kohler, Bang Feng, Yang Cao, Anna Lipzen, Christopher Daum, Hope Hundley, Jasmyn Pangilinan, Jenifer Johnson, Kerrie W Barry, Kurt M LaButti, Vivian Ng, Steven R Ahrendt, Byoungnam Min, In-Geol Choi, Hongjae Park, Jonathan M Plett, John M Gladden, Joseph W Spatafora, László G Nagy, Bernard Henrissat, Igor V Grigoriev, Zhu-Liang Yang, Jian-Ping Xu, Francis M Martin
Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales. The New phytologist (2021)
Veronica Basso, Annegret Kohler, Shingo Miyauchi, Vasanth Singan, Frédéric Guinet, Jan Šimura, Ondřej Novák, Kerrie W Barry, Mojgan Amirebrahimi, Jonathan Block, Yohann Daguerre, Hyunsoo Na, Igor V Grigoriev, Francis Martin, Claire Veneault-Fourrey
An ectomycorrhizal fungus alters sensitivity to jasmonate, salicylate, gibberellin, and ethylene in host roots. Plant, cell & environment 43 (4) (2020)
José Eduardo Marqués-Gálvez, Shingo Miyauchi, Francesco Paolocci, Alfonso Navarro-Ródenas, Francisco Arenas, Manuela Pérez-Gilabert, Emmanuelle Morin, Lucas Auer, Kerrie W Barry, Alan Kuo, Igor V Grigoriev, Francis M Martin, Annegret Kohler, Asunción Morte
Desert truffle genomes reveal their reproductive modes and new insights into plant-fungal interaction and ectendomycorrhizal lifestyle. The New phytologist 229 (5) (2020)
Shingo Miyauchi, Enikő Kiss, Alan Kuo, Elodie Drula, Annegret Kohler, Marisol Sánchez-García, Emmanuelle Morin, Bill Andreopoulos, Kerrie W Barry, Gregory Bonito, Marc Buée, Akiko Carver, Cindy Chen, Nicolas Cichocki, Alicia Clum, David Culley, Pedro W Crous, Laure Fauchery, Mariangela Girlanda, Richard D Hayes, Zsófia Kéri, Kurt M LaButti, Anna Lipzen, Vincent Lombard, John M Gladden, François Maillard, Claude Murat, Matt Nolan, Robin A Ohm, Jasmyn Pangilinan, Maíra de Freitas Pereira, Silvia Perotto, Martina Peter, Stephanie Pfister, Robert Riley, Yaron Sitrit, J Benjamin Stielow, Gergely J Szöllősi, Lucia Žifčáková, Martina Štursová, Joseph W Spatafora, Leho Tedersoo, Lu-Min Vaario, Akiyoshi Yamada, Mi Yan, Pengfei Wang, Jian-Ping Xu, Tom Bruns, Petr Baldrian, Rytas Vilgalys, Christophe Dunand, Bernard Henrissat, Igor V Grigoriev, David Hibbett, László G Nagy, Francis M Martin
Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits. Nature communications 11 (1) (2020)
Emmanuelle Morin, Shingo Miyauchi, Hélène San Clemente, Eric C H Chen, Adrian Pelin, Ivan de la Providencia, Steve Ndikumana, Denis Beaudet, Mathieu Hainaut, Elodie Drula, Alan Kuo, Nianwu Tang, Sébastien Roy, Julie Viala, Bernard Henrissat, Igor V Grigoriev, Nicolas Corradi, Christophe Roux, Francis M Martin
Comparative genomics of Rhizophagus irregularis, R. cerebriforme, R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina. The New phytologist 222 (3) (2019)
Kristian Erik Høpfner Frandsen, Morten Tovborg, Christian I Jørgensen, Nikolaj Spodsberg, Marie-Noëlle Rosso, Glyn R Hemsworth, Elspeth F Garman, Geoffrey W Grime, Jens-Christian Navarro Poulsen, Tanveer S Batth, Shingo Miyauchi, Anna Lipzen, Chris Daum, Igor V Grigoriev, Katja S Johansen, Bernard Henrissat, Jean-Guy Berrin, Leila Lo Leggio
Insights into an unusual Auxiliary Activity 9 family member lacking the histidine brace motif of lytic polysaccharide monooxygenases. The Journal of biological chemistry 294 (45) (2019)
Claude Murat, Thibaut Payen, Benjamin Noel, Alan Kuo, Emmanuelle Morin, Juan Chen, Annegret Kohler, Krisztina Krizsán, Raffaella Balestrini, Corinne Da Silva, Barbara Montanini, Mathieu Hainaut, Elisabetta Levati, Kerrie W Barry, Beatrice Belfiori, Nicolas Cichocki, Alicia Clum, Rhyan B Dockter, Laure Fauchery, Julie Guy, Mirco Iotti, François Le Tacon, Erika A Lindquist, Anna Lipzen, Fabienne Malagnac, Antonietta Mello, Virginie Molinier, Shingo Miyauchi, Julie Poulain, Claudia Riccioni, Andrea Rubini, Yaron Sitrit, Richard Splivallo, Stefanie Traeger, Mei Wang, Lucia Žifčáková, Daniel Wipf, Alessandra Zambonelli, Francesco Paolocci, Minou Nowrousian, Simone Ottonello, Petr Baldrian, Joseph W Spatafora, Bernard Henrissat, László G Nagy, Jean-Marc Aury, Patrick Wincker, Igor V Grigoriev, Paola Bonfante, Francis M Martin
Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle. Nature ecology & evolution 2 (12) (2018)
Shingo Miyauchi, David Navarro, Sacha Grisel, Didier Chevret, Jean-Guy Berrin, Marie-Noelle Rosso
The integrative omics of white-rot fungus Pycnoporus coccineus reveals co-regulated CAZymes for orchestrated lignocellulose breakdown. PloS one 12 (4) (2017)