Alan Kuo

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 12

Top Topics

Dna Methylation

Top Venues

Journal of fungi (Basel, Switzerland)

The New phytologist

Communications biology

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Sebastian Theobald, Tammi C Vesth, Elena Geib, Jane L Nybo, Jens Christian Frisvad, Thomas O Larsen, Alan Kuo, Kurt M LaButti, Ellen K Lyhne, Inge Kjærbølling, Line Ledsgaard, Kerrie W Barry, Alicia Clum, Cindy Chen, Matt Nolan, Laura Sandor, Anna Lipzen, Stephen Mondo, Jasmyn Pangilinan, Asaf Salamov, Robert Riley, Ad Wiebenga, Astrid Müller, Roland S Kun, Ana Carolina Dos Santos Gomes, Bernard Henrissat, Jon K Magnuson, Blake A Simmons, Miia R Mäkelä, Uffe H Mortensen, Igor V Grigoriev, Matthias Brock, Scott E Baker, Ronald P de Vries, Mikael R Andersen
Genomic Analysis of Aspergillus Section Terrei Reveals a High Potential in Secondary Metabolite Production and Plant Biomass Degradation. Journal of fungi (Basel, Switzerland) 10 (7) (2024)
Andrei Stecca Steindorff, Maria Victoria Aguilar Pontes, Aaron J Robinson, Bill Andreopoulos, Kurt M LaButti, Alan Kuo, Stephen J Mondo, Robert Riley, Robert Otillar, Sajeet Haridas, Anna Lipzen, Jerry W Jenkins, Jeremy Schmutz, Alicia Clum, Ian D Reid, Marie-Claude Moisan, Gregory Butler, Thi Truc Minh Nguyen, Ken Dewar, Gavin C Conant, Elodie Drula, Bernard Henrissat, Colleen M Hansel, Steven Singer, Miriam I Hutchinson, Ronald P de Vries, Donald O Natvig, Amy J Powell, Adrian Tsang, Igor V Grigoriev
Comparative genomic analysis of thermophilic fungi reveals convergent evolutionary adaptations and gene losses. Communications biology 7 (1) (2024)
Sebastian Theobald, Tammi C Vesth, Elena Geib, Jane L Nybo, Jens Christian Frisvad, Thomas O Larsen, Alan Kuo, Kurt M LaButti, Ellen K Lyhne, Inge Kjærbølling, Line Ledsgaard, Kerrie W Barry, Alicia Clum, Cindy Chen, Matt Nolan, Laura Sandor, Anna Lipzen, Stephen Mondo, Jasmyn Pangilinan, Asaf Salamov, Robert Riley, Ad Wiebenga, Astrid Müller, Roland S Kun, Ana Carolina Dos Santos Gomes, Bernard Henrissat, Jon K Magnuson, Blake A Simmons, Miia R Mäkelä, Uffe H Mortensen, Igor V Grigoriev, Matthias Brock, Scott E Baker, Ronald P de Vries, Mikael R Andersen
Genomic Analysis of Aspergillus Section Terrei Reveals a High Potential in Secondary Metabolite Production and Plant Biomass Degradation. Journal of fungi (Basel, Switzerland) 10 (7) (2024)
Sebastian Theobald, Tammi C Vesth, Elena Geib, Jane L Nybo, Jens Christian Frisvad, Thomas O Larsen, Alan Kuo, Kurt M LaButti, Ellen K Lyhne, Inge Kjærbølling, Line Ledsgaard, Kerrie W Barry, Alicia Clum, Cindy Chen, Matt Nolan, Laura Sandor, Anna Lipzen, Stephen Mondo, Jasmyn Pangilinan, Asaf Salamov, Robert Riley, Ad Wiebenga, Astrid Müller, Roland S Kun, Ana Carolina Dos Santos Gomes, Bernard Henrissat, Jon K Magnuson, Blake A Simmons, Miia R Mäkelä, Uffe H Mortensen, Igor V Grigoriev, Matthias Brock, Scott E Baker, Ronald P de Vries, Mikael R Andersen
Genomic Analysis of Aspergillus Section Terrei Reveals a High Potential in Secondary Metabolite Production and Plant Biomass Degradation. Journal of fungi (Basel, Switzerland) 10 (7) (2024)
Yi-Hong Ke, Sara Branco, Anna Liza Bazzicalupo, Nhu H Nguyen, Hui-Ling Liao, Peter G Kennedy, Thomas D Bruns, Alan Kuo, Kurt M LaButti, Kerrie W Barry, Igor V Grigoriev, Rytas Vilgalys
Genomic determination of breeding systems and trans-specific evolution of HD MAT genes in suilloid fungi. Genetics (2023)
Reid Longley, Aaron J Robinson, Julian A Liber, Abigail E Bryson, Demosthenes P Morales, Kurt M LaButti, Robert Riley, Stephen J Mondo, Alan Kuo, Yuko Yoshinaga, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Alessandro Desirò, Patrick S G Chain, Gregory M Bonito
Comparative genomics of Mollicutes-related endobacteria supports a late invasion into Mucoromycota fungi. Communications biology 6 (1) (2023)
Kevin R Amses, D Rabern Simmons, Joyce E Longcore, Stephen J Mondo, Kensuke Seto, Gustavo H Jerônimo, Anne E Bonds, C Alisha Quandt, William J Davis, Ying Chang, Brian A Federici, Alan Kuo, Kurt M LaButti, Jasmyn Pangilinan, William Andreopoulos, Andrew Tritt, Robert Riley, Hope Hundley, Jenifer Johnson, Anna Lipzen, Kerrie Barry, B Franz Lang, Christina A Cuomo, Nicolas E Buchler, Igor V Grigoriev, Joseph W Spatafora, Jason E Stajich, Timothy Y James
Diploid-dominant life cycles characterize the early evolution of Fungi. Proceedings of the National Academy of Sciences of the United States of America 119 (36) (2022)
Annie Lebreton, Nianwu Tang, Alan Kuo, Kurt M LaButti, William Andreopoulos, Elodie Drula, Shingo Miyauchi, Kerrie W Barry, Alicia Clum, Anna Lipzen, Daniel Mousain, Vivian Ng, Ran Wang, Yu-Cheng Dai, Bernard Henrissat, Igor V Grigoriev, Alexis Guerin-Laguette, Fu-Qiang Yu, Francis M Martin
Comparative genomics reveals a dynamic genome evolution in the ectomycorrhizal milk-cap (Lactarius) mushrooms. The New phytologist 235 (1) (2022)
Gang Wu, Shingo Miyauchi, Emmanuelle Morin, Alan Kuo, Elodie Drula, Torda Varga, Annegret Kohler, Bang Feng, Yang Cao, Anna Lipzen, Christopher Daum, Hope Hundley, Jasmyn Pangilinan, Jenifer Johnson, Kerrie W Barry, Kurt M LaButti, Vivian Ng, Steven R Ahrendt, Byoungnam Min, In-Geol Choi, Hongjae Park, Jonathan M Plett, John M Gladden, Joseph W Spatafora, László G Nagy, Bernard Henrissat, Igor V Grigoriev, Zhu-Liang Yang, Jian-Ping Xu, Francis M Martin
Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales. The New phytologist (2021)
Lotus A Lofgren, Nhu H Nguyen, Rytas Vilgalys, Joske Ruytinx, Hui-Ling Liao, Sara Branco, Alan Kuo, Kurt M LaButti, Anna Lipzen, William Andreopoulos, Jasmyn Pangilinan, Robert Riley, Hope Hundley, Hyunsoo Na, Kerrie W Barry, Igor V Grigoriev, Jason E Stajich, Peter G Kennedy
Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi. The New phytologist 230 (2) (2021)
Javier F Tabima, Ian A Trautman, Ying Chang, Yan Wang, Stephen J Mondo, Alan Kuo, Asaf Salamov, Igor V Grigoriev, Jason E Stajich, Joseph W Spatafora
Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus. G3 (Bethesda, Md.) 10 (9) (2020)
Irina S Druzhinina, Komal Chenthamara, Jian Zhang, Lea Atanasova, Dongqing Yang, Youzhi Miao, Mohammad J Rahimi, Marica Grujic, Feng Cai, Shadi Pourmehdi, Kamariah Abu Salim, Carina Pretzer, Alexey G Kopchinskiy, Bernard Henrissat, Alan Kuo, Hope Hundley, Mei Wang, Andrea Aerts, Asaf Salamov, Anna Lipzen, Kurt M LaButti, Kerrie Barry, Igor V Grigoriev, Qirong Shen, Christian P Kubicek
Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts. PLoS genetics 14 (4) (2018)