Kerrie W Barry (Kerrie Barry, K Barry)

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 75

Top Venues

DOE-JGI

This page only lists publications with an associated author ORCID identifier.

Affiliation History

DOE-JGI Apr 22 2004

United States

Scientific Project Manager

Publications

Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Günter Theißen, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Nature genetics 56 (5) (2024)
Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Günter Theißen, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Nature genetics (2024)
Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Günter Theißen, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Nature genetics 56 (5) (2024)
Alexander H Smith, Jessica Fletcher, Janne Swinnen, Karl Jonckheere, Anna Liza Bazzicalupo, Hui-Ling Liao, Gregory J Ragland, Jan Colpaert, Anna Lipzen, Sravanthi Tejomurthula, Kerrie W Barry, Igor V Grigoriev, Joske Ruytinx, Sara Branco
Comparative transcriptomics provides insight into molecular mechanisms of zinc tolerance in the ectomycorrhizal fungus Suillus luteus. G3 (Bethesda, Md.) (2024)
Xiao Ma, Steffen Vanneste, Jiyang Chang, Luca Ambrosino, Kerrie W Barry, Till Bayer, Alexander A Bobrov, LoriBeth Boston, Justin E Campbell, Hengchi Chen, Maria Luisa Chiusano, Emanuela Dattolo, Jerry W Jenkins, Guifen He, Jerry W Jenkins, Marina Khachaturyan, Lazaro Marín-Guirao, Attila Mesterházy, Danish-Daniel Muhd, Jessica Pazzaglia, Christopher Plott, Shanmugam Rajasekar, Stephane Rombauts, Miriam Ruocco, Alison Dawn Scott, Min Pau Tan, Jozefien Van de Velde, Bartel Vanholme, Jenell Webber, Li Lian Wong, Mi Yan, Yeong Yik Sung, Polina Yu Novikova, Jeremy Schmutz, Thorsten B H Reusch, Gabriele Procaccini, Jeanine L Olsen, Yves Van de Peer
Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment. Nature plants 10 (2) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
L Felipe Benites, Timothy G Stephens, Julia Van Etten, Timeeka James, William C Christian, Kerrie W Barry, Igor V Grigoriev, Timothy R McDermott, Debashish Bhattacharya
Hot springs viruses at Yellowstone National Park have ancient origins and are adapted to thermophilic hosts. Communications biology 7 (1) (2024)
Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Günter Theißen, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Nature genetics (2024)
L Felipe Benites, Timothy G Stephens, Julia Van Etten, Timeeka James, William C Christian, Kerrie W Barry, Igor V Grigoriev, Timothy R McDermott, Debashish Bhattacharya
Hot springs viruses at Yellowstone National Park have ancient origins and are adapted to thermophilic hosts. Communications biology 7 (1) (2024)
Joshua H Coomey, Kirk J-M MacKinnon, Ian W McCahill, Bahman Khahani, Pubudu P Handakumbura, Gina M Trabucco, Jessica Mazzola, Nicole A Leblanc, Rithany Kheam, Miriam Hernandez-Romero, Kerrie W Barry, Lifeng Liu, Ji E Lee, John P Vogel, Ronan C O'Malley, James J Chambers, Samuel P Hazen
Mechanically induced localisation of SECONDARY WALL INTERACTING bZIP is associated with thigmomorphogenic and secondary cell wall gene expression. Quantitative plant biology 5 (2024)
Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Günter Theißen, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Nature genetics 56 (5) (2024)
Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Günter Theißen, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Nature genetics 56 (5) (2024)
José Eduardo Marqués-Gálvez, Gaurav Pandharikar, Veronica Basso, Annegret Kohler, Nathalie D Lackus, Kerrie W Barry, Keykhosrow Keymanesh, Jenifer Johnson, Vasanth R Singan, Igor V Grigoriev, Rytas Vilgalys, Francis M Martin, Claire Veneault-Fourrey
Populus MYC2 orchestrates root transcriptional reprogramming of defence pathway to impair Laccaria bicolor ectomycorrhizal development. The New phytologist 242 (2) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Sebastian Theobald, Tammi C Vesth, Elena Geib, Jane L Nybo, Jens Christian Frisvad, Thomas O Larsen, Alan Kuo, Kurt M LaButti, Ellen K Lyhne, Inge Kjærbølling, Line Ledsgaard, Kerrie W Barry, Alicia Clum, Cindy Chen, Matt Nolan, Laura Sandor, Anna Lipzen, Stephen Mondo, Jasmyn Pangilinan, Asaf Salamov, Robert Riley, Ad Wiebenga, Astrid Müller, Roland S Kun, Ana Carolina Dos Santos Gomes, Bernard Henrissat, Jon K Magnuson, Blake A Simmons, Miia R Mäkelä, Uffe H Mortensen, Igor V Grigoriev, Matthias Brock, Scott E Baker, Ronald P de Vries, Mikael R Andersen
Genomic Analysis of Aspergillus Section Terrei Reveals a High Potential in Secondary Metabolite Production and Plant Biomass Degradation. Journal of fungi (Basel, Switzerland) 10 (7) (2024)
José Eduardo Marqués-Gálvez, Gaurav Pandharikar, Veronica Basso, Annegret Kohler, Nathalie D Lackus, Kerrie W Barry, Keykhosrow Keymanesh, Jenifer Johnson, Vasanth R Singan, Igor V Grigoriev, Rytas Vilgalys, Francis M Martin, Claire Veneault-Fourrey
Populus MYC2 orchestrates root transcriptional reprogramming of defence pathway to impair Laccaria bicolor ectomycorrhizal development. The New phytologist (2024)
Xiao Ma, Steffen Vanneste, Jiyang Chang, Luca Ambrosino, Kerrie W Barry, Till Bayer, Alexander A Bobrov, LoriBeth Boston, Justin E Campbell, Hengchi Chen, Maria Luisa Chiusano, Emanuela Dattolo, Jerry W Jenkins, Guifen He, Jerry W Jenkins, Marina Khachaturyan, Lazaro Marín-Guirao, Attila Mesterházy, Danish-Daniel Muhd, Jessica Pazzaglia, Christopher Plott, Shanmugam Rajasekar, Stephane Rombauts, Miriam Ruocco, Alison Dawn Scott, Min Pau Tan, Jozefien Van de Velde, Bartel Vanholme, Jenell Webber, Li Lian Wong, Mi Yan, Yeong Yik Sung, Polina Yu Novikova, Jeremy Schmutz, Thorsten B H Reusch, Gabriele Procaccini, Jeanine L Olsen, Yves Van de Peer
Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment. Nature plants 10 (2) (2024)
Xiao Ma, Steffen Vanneste, Jiyang Chang, Luca Ambrosino, Kerrie W Barry, Till Bayer, Alexander A Bobrov, LoriBeth Boston, Justin E Campbell, Hengchi Chen, Maria Luisa Chiusano, Emanuela Dattolo, Jerry W Jenkins, Guifen He, Jerry W Jenkins, Marina Khachaturyan, Lazaro Marín-Guirao, Attila Mesterházy, Danish-Daniel Muhd, Jessica Pazzaglia, Christopher Plott, Shanmugam Rajasekar, Stephane Rombauts, Miriam Ruocco, Alison Dawn Scott, Min Pau Tan, Jozefien Van de Velde, Bartel Vanholme, Jenell Webber, Li Lian Wong, Mi Yan, Yeong Yik Sung, Polina Yu Novikova, Jeremy Schmutz, Thorsten B H Reusch, Gabriele Procaccini, Jeanine L Olsen, Yves Van de Peer
Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment. Nature plants 10 (2) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Günter Theißen, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Nature genetics 56 (5) (2024)
José Eduardo Marqués-Gálvez, Gaurav Pandharikar, Veronica Basso, Annegret Kohler, Nathalie D Lackus, Kerrie W Barry, Keykhosrow Keymanesh, Jenifer Johnson, Vasanth R Singan, Igor V Grigoriev, Rytas Vilgalys, Francis M Martin, Claire Veneault-Fourrey
Populus MYC2 orchestrates root transcriptional reprogramming of defence pathway to impair Laccaria bicolor ectomycorrhizal development. The New phytologist 242 (2) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
L Felipe Benites, Timothy G Stephens, Julia Van Etten, Timeeka James, William C Christian, Kerrie W Barry, Igor V Grigoriev, Timothy R McDermott, Debashish Bhattacharya
Hot springs viruses at Yellowstone National Park have ancient origins and are adapted to thermophilic hosts. Communications biology 7 (1) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature (2024)
Xiao Ma, Steffen Vanneste, Jiyang Chang, Luca Ambrosino, Kerrie W Barry, Till Bayer, Alexander A Bobrov, LoriBeth Boston, Justin E Campbell, Hengchi Chen, Maria Luisa Chiusano, Emanuela Dattolo, Jerry W Jenkins, Guifen He, Jerry W Jenkins, Marina Khachaturyan, Lazaro Marín-Guirao, Attila Mesterházy, Danish-Daniel Muhd, Jessica Pazzaglia, Christopher Plott, Shanmugam Rajasekar, Stephane Rombauts, Miriam Ruocco, Alison Dawn Scott, Min Pau Tan, Jozefien Van de Velde, Bartel Vanholme, Jenell Webber, Li Lian Wong, Mi Yan, Yeong Yik Sung, Polina Yu Novikova, Jeremy Schmutz, Thorsten B H Reusch, Gabriele Procaccini, Jeanine L Olsen, Yves Van de Peer
Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment. Nature plants 10 (2) (2024)
Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Günter Theißen, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Nature genetics 56 (5) (2024)
Xiao Ma, Steffen Vanneste, Jiyang Chang, Luca Ambrosino, Kerrie W Barry, Till Bayer, Alexander A Bobrov, LoriBeth Boston, Justin E Campbell, Hengchi Chen, Maria Luisa Chiusano, Emanuela Dattolo, Jerry W Jenkins, Guifen He, Jerry W Jenkins, Marina Khachaturyan, Lazaro Marín-Guirao, Attila Mesterházy, Danish-Daniel Muhd, Jessica Pazzaglia, Christopher Plott, Shanmugam Rajasekar, Stephane Rombauts, Miriam Ruocco, Alison Dawn Scott, Min Pau Tan, Jozefien Van de Velde, Bartel Vanholme, Jenell Webber, Li Lian Wong, Mi Yan, Yeong Yik Sung, Polina Yu Novikova, Jeremy Schmutz, Thorsten B H Reusch, Gabriele Procaccini, Jeanine L Olsen, Yves Van de Peer
Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment. Nature plants 10 (2) (2024)
L Felipe Benites, Timothy G Stephens, Julia Van Etten, Timeeka James, William C Christian, Kerrie W Barry, Igor V Grigoriev, Timothy R McDermott, Debashish Bhattacharya
Hot springs viruses at Yellowstone National Park have ancient origins and are adapted to thermophilic hosts. Communications biology 7 (1) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Günter Theißen, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Nature genetics 56 (5) (2024)
Xiao Ma, Steffen Vanneste, Jiyang Chang, Luca Ambrosino, Kerrie W Barry, Till Bayer, Alexander A Bobrov, LoriBeth Boston, Justin E Campbell, Hengchi Chen, Maria Luisa Chiusano, Emanuela Dattolo, Jerry W Jenkins, Guifen He, Jerry W Jenkins, Marina Khachaturyan, Lazaro Marín-Guirao, Attila Mesterházy, Danish-Daniel Muhd, Jessica Pazzaglia, Christopher Plott, Shanmugam Rajasekar, Stephane Rombauts, Miriam Ruocco, Alison Dawn Scott, Min Pau Tan, Jozefien Van de Velde, Bartel Vanholme, Jenell Webber, Li Lian Wong, Mi Yan, Yeong Yik Sung, Polina Yu Novikova, Jeremy Schmutz, Thorsten B H Reusch, Gabriele Procaccini, Jeanine L Olsen, Yves Van de Peer
Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment. Nature plants 10 (2) (2024)
Joshua H Coomey, Kirk J-M MacKinnon, Ian W McCahill, Bahman Khahani, Pubudu P Handakumbura, Gina M Trabucco, Jessica Mazzola, Nicole A Leblanc, Rithany Kheam, Miriam Hernandez-Romero, Kerrie W Barry, Lifeng Liu, Ji E Lee, John P Vogel, Ronan C O'Malley, James J Chambers, Samuel P Hazen
Mechanically induced localisation of SECONDARY WALL INTERACTING bZIP is associated with thigmomorphogenic and secondary cell wall gene expression. Quantitative plant biology 5 (2024)
Xiao Ma, Steffen Vanneste, Jiyang Chang, Luca Ambrosino, Kerrie W Barry, Till Bayer, Alexander A Bobrov, LoriBeth Boston, Justin E Campbell, Hengchi Chen, Maria Luisa Chiusano, Emanuela Dattolo, Jerry W Jenkins, Guifen He, Jerry W Jenkins, Marina Khachaturyan, Lazaro Marín-Guirao, Attila Mesterházy, Danish-Daniel Muhd, Jessica Pazzaglia, Christopher Plott, Shanmugam Rajasekar, Stephane Rombauts, Miriam Ruocco, Alison Dawn Scott, Min Pau Tan, Jozefien Van de Velde, Bartel Vanholme, Jenell Webber, Li Lian Wong, Mi Yan, Yeong Yik Sung, Polina Yu Novikova, Jeremy Schmutz, Thorsten B H Reusch, Gabriele Procaccini, Jeanine L Olsen, Yves Van de Peer
Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment. Nature plants (2024)
Xiao Ma, Steffen Vanneste, Jiyang Chang, Luca Ambrosino, Kerrie W Barry, Till Bayer, Alexander A Bobrov, LoriBeth Boston, Justin E Campbell, Hengchi Chen, Maria Luisa Chiusano, Emanuela Dattolo, Jerry W Jenkins, Guifen He, Jerry W Jenkins, Marina Khachaturyan, Lazaro Marín-Guirao, Attila Mesterházy, Danish-Daniel Muhd, Jessica Pazzaglia, Christopher Plott, Shanmugam Rajasekar, Stephane Rombauts, Miriam Ruocco, Alison Dawn Scott, Min Pau Tan, Jozefien Van de Velde, Bartel Vanholme, Jenell Webber, Li Lian Wong, Mi Yan, Yeong Yik Sung, Polina Yu Novikova, Jeremy Schmutz, Thorsten B H Reusch, Gabriele Procaccini, Jeanine L Olsen, Yves Van de Peer
Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment. Nature plants 10 (2) (2024)
Sebastian Theobald, Tammi C Vesth, Elena Geib, Jane L Nybo, Jens Christian Frisvad, Thomas O Larsen, Alan Kuo, Kurt M LaButti, Ellen K Lyhne, Inge Kjærbølling, Line Ledsgaard, Kerrie W Barry, Alicia Clum, Cindy Chen, Matt Nolan, Laura Sandor, Anna Lipzen, Stephen Mondo, Jasmyn Pangilinan, Asaf Salamov, Robert Riley, Ad Wiebenga, Astrid Müller, Roland S Kun, Ana Carolina Dos Santos Gomes, Bernard Henrissat, Jon K Magnuson, Blake A Simmons, Miia R Mäkelä, Uffe H Mortensen, Igor V Grigoriev, Matthias Brock, Scott E Baker, Ronald P de Vries, Mikael R Andersen
Genomic Analysis of Aspergillus Section Terrei Reveals a High Potential in Secondary Metabolite Production and Plant Biomass Degradation. Journal of fungi (Basel, Switzerland) 10 (7) (2024)
Sebastian Theobald, Tammi C Vesth, Elena Geib, Jane L Nybo, Jens Christian Frisvad, Thomas O Larsen, Alan Kuo, Kurt M LaButti, Ellen K Lyhne, Inge Kjærbølling, Line Ledsgaard, Kerrie W Barry, Alicia Clum, Cindy Chen, Matt Nolan, Laura Sandor, Anna Lipzen, Stephen Mondo, Jasmyn Pangilinan, Asaf Salamov, Robert Riley, Ad Wiebenga, Astrid Müller, Roland S Kun, Ana Carolina Dos Santos Gomes, Bernard Henrissat, Jon K Magnuson, Blake A Simmons, Miia R Mäkelä, Uffe H Mortensen, Igor V Grigoriev, Matthias Brock, Scott E Baker, Ronald P de Vries, Mikael R Andersen
Genomic Analysis of Aspergillus Section Terrei Reveals a High Potential in Secondary Metabolite Production and Plant Biomass Degradation. Journal of fungi (Basel, Switzerland) 10 (7) (2024)
Xiao Ma, Steffen Vanneste, Jiyang Chang, Luca Ambrosino, Kerrie W Barry, Till Bayer, Alexander A Bobrov, LoriBeth Boston, Justin E Campbell, Hengchi Chen, Maria Luisa Chiusano, Emanuela Dattolo, Jerry W Jenkins, Guifen He, Jerry W Jenkins, Marina Khachaturyan, Lazaro Marín-Guirao, Attila Mesterházy, Danish-Daniel Muhd, Jessica Pazzaglia, Christopher Plott, Shanmugam Rajasekar, Stephane Rombauts, Miriam Ruocco, Alison Dawn Scott, Min Pau Tan, Jozefien Van de Velde, Bartel Vanholme, Jenell Webber, Li Lian Wong, Mi Yan, Yeong Yik Sung, Polina Yu Novikova, Jeremy Schmutz, Thorsten B H Reusch, Gabriele Procaccini, Jeanine L Olsen, Yves Van de Peer
Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment. Nature plants 10 (2) (2024)
Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Günter Theißen, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Nature genetics 56 (5) (2024)
Ran Zhou, Jerry W Jenkins, Yibing Zeng, Shengqiang Shu, Hosung Jang, Scott A Harding, Melissa Williams, Christopher Plott, Kerrie W Barry, Maxim Koriabine, Mojgan Amirebrahimi, Jayson Talag, Shanmugam Rajasekar, Jerry W Jenkins, Robert J Schmitz, R Kelly Dawe, Jeremy Schmutz, Chung-Jui Tsai
Haplotype-resolved genome assembly of Populus tremula × P. alba reveals aspen-specific megabase satellite DNA. The Plant journal : for cell and molecular biology (2023)
François Maillard, Annegret Kohler, Emmanuelle Morin, Christian Hossann, Shingo Miyauchi, Isabelle Ziegler-Devin, Dominique Gérant, Nicolas Angeli, Anna Lipzen, Keykhosrow Keymanesh, Jenifer Johnson, Kerrie W Barry, Igor V Grigoriev, Francis M Martin, Marc Buée
Functional genomics gives new insights into the ectomycorrhizal degradation of chitin. The New phytologist (2023)
Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Danuše Tarkowská, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Chromosome-level genomes of multicellular algal sisters to land plants illuminate signaling network evolution. bioRxiv : the preprint server for biology (2023)
Yi-Hong Ke, Sara Branco, Anna Liza Bazzicalupo, Nhu H Nguyen, Hui-Ling Liao, Peter G Kennedy, Thomas D Bruns, Alan Kuo, Kurt M LaButti, Kerrie W Barry, Igor V Grigoriev, Rytas Vilgalys
Genomic determination of breeding systems and trans-specific evolution of HD MAT genes in suilloid fungi. Genetics (2023)
Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Danuše Tarkowská, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Chromosome-level genomes of multicellular algal sisters to land plants illuminate signaling network evolution. bioRxiv : the preprint server for biology (2023)
Degao Liu, Dan Tang, Meng Xie, Jin Zhang, Longmei Zhai, Jiangping Mao, Chao Luo, Anna Lipzen, Yu Zhang, Emily Savage, Guoliang Yuan, Hao-Bo Guo, Dimiru Tadesse, Rongbin Hu, Sara S Jawdy, Hua Cheng, Linling Li, Huseyin Yer, Miranda M Clark, Huayu Sun, Jiyuan Shi, Roshani Budhathoki, Rahul Kumar, Troy Kamuda, Yanjun Li, Christa Pennacchio, Kerrie W Barry, Jeremy Schmutz, Rajiv J Berry, Wellington Muchero, Jin-Gui Chen, Yi Li, Gerald A Tuskan, Xiaohan Yang
Agave REVEILLE1 regulates the onset and release of seasonal dormancy in Populus. Plant physiology 191 (3) (2023)
Jin Zhang, Xiaqin Wang, Hsin-Tzu Wang, Zhenzhen Qiao, Tao Yao, Meng Xie, Breeanna R Urbanowicz, Wei Zeng, Sara S Jawdy, Lee E Gunter, Xiaohan Yang, Olaf Czarnecki, Sharon Regan, Armand Séguin, William Rottmann, Kimberly A Winkeler, Robert W Sykes, Anna Lipzen, Christopher Daum, Kerrie W Barry, Meng-Zhu Lu, Gerald A Tuskan, Wellington Muchero, Jin-Gui Chen
Overexpression of REDUCED WALL ACETYLATION C increases xylan acetylation and biomass recalcitrance in Populus. Plant physiology (2023)
Neha Sahu, Boris Indic, Johanna Wong-Bajracharya, Zsolt Merényi, Huei-Mien Ke, Steven R Ahrendt, Tori-Lee Monk, Sándor Kocsubé, Elodie Drula, Anna Lipzen, Balázs Bálint, Bernard Henrissat, Bill Andreopoulos, Francis M Martin, Christoffer Bugge Harder, Daniel Rigling, Kathryn L Ford, Gary D Foster, Jasmyn Pangilinan, Alexie Papanicolaou, Kerrie W Barry, Kurt M LaButti, Máté Virágh, Maxim Koriabine, Mi Yan, Robert Riley, Simang Champramary, Krista L Plett, Igor V Grigoriev, Isheng Jason Tsai, Jason Slot, György Sipos, Jonathan M Plett, László G Nagy
Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria. Nature microbiology (2023)
Rory J Craig, Sean D Gallaher, Shengqiang Shu, Patrice A Salomé, Jerry W Jenkins, Crysten E Blaby-Haas, Samuel Owen Purvine, Samuel O'Donnell, Kerrie W Barry, Jerry W Jenkins, Daniela Strenkert, Janette Kropat, Christopher Daum, Yuko Yoshinaga, David M Goodstein, Olivier Vallon, Jeremy Schmutz, Sabeeha S Merchant
The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type plus and minus strains reveal extensive structural mutation in the laboratory. The Plant cell 35 (2) (2023)
Julien Vigneaud, Annegret Kohler, Mamadou Dia Sow, Delaunay A, Laure Fauchery, Frederic Guinet, Christian Daviaud, Kerrie W Barry, Keykhosrow Keymanesh, Jenifer Johnson, Vasanth R Singan, Igor V Grigoriev, Régis Fichot, Daniel Conde, Mariano Perales, Jorg Tost, Francis M Martin, Isabel Allona, Steven H Strauss, Claire Veneault-Fourrey, Stéphane Maury
DNA hypomethylation of the host tree impairs interaction with mutualistic ectomycorrhizal fungus. The New phytologist (2023)
Reid Longley, Aaron J Robinson, Julian A Liber, Abigail E Bryson, Demosthenes P Morales, Kurt M LaButti, Robert Riley, Stephen J Mondo, Alan Kuo, Yuko Yoshinaga, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Alessandro Desirò, Patrick S G Chain, Gregory M Bonito
Comparative genomics of Mollicutes-related endobacteria supports a late invasion into Mucoromycota fungi. Communications biology 6 (1) (2023)
Kaile Zhang, Chang-Keun Sung, Ryan V Tappero, Jennifer M Bhatnagar, Rytas Vilgalys, Kerrie W Barry, Keykhosrow Keymanesh, Sravanthi Tejomurthula, Igor V Grigoriev, William R Kew, Elizabeth K Eder, Carrie D Nicora, Hui-Ling Liao
Ectomycorrhizal fungi enhance pine growth by stimulating iron-dependent mechanisms with trade-offs in symbiotic performance. The New phytologist (2023)
François Maillard, Annegret Kohler, Emmanuelle Morin, Christian Hossann, Shingo Miyauchi, Isabelle Ziegler-Devin, Dominique Gérant, Nicolas Angeli, Anna Lipzen, Keykhosrow Keymanesh, Jenifer Johnson, Kerrie W Barry, Igor V Grigoriev, Francis M Martin, Marc Buée
Functional genomics gives new insights into the ectomycorrhizal degradation of chitin. The New phytologist 238 (2) (2023)
François Maillard, Annegret Kohler, Emmanuelle Morin, Christian Hossann, Shingo Miyauchi, Isabelle Ziegler-Devin, Dominique Gérant, Nicolas Angeli, Anna Lipzen, Keykhosrow Keymanesh, Jenifer Johnson, Kerrie W Barry, Igor V Grigoriev, Francis M Martin, Marc Buée
Functional genomics gives new insights into the ectomycorrhizal degradation of chitin. The New phytologist 238 (2) (2023)
Xuehuan Feng, Jinfang Zheng, Iker Irisarri, Huihui Yu, Bo Zheng, Zahin Ali, Sophie de Vries, Jean Keller, Janine M R Fürst-Jansen, Armin Dadras, Jaccoline M S Zegers, Tim P Rieseberg, Amra Dhabalia Ashok, Tatyana Darienko, Maaike J Bierenbroodspot, Lydia Gramzow, Romy Petroll, Fabian B Haas, Noe Fernandez Pozo, Orestis Nousias, Tang Li, Elisabeth Fitzek, W Scott Grayburn, Nina Rittmeier, Charlotte Permann, Florian Rümpler, John M Archibald, Danuše Tarkowská, Jeffrey P Mower, Maike Lorenz, Henrik Buschmann, Klaus von Schwartzenberg, Lori Boston, Richard D Hayes, Christopher Daum, Kerrie W Barry, Igor V Grigoriev, Xiyin Wang, Fay-Wei Li, Stefan Andreas Rensing, Julius Ben Ari, Noa Keren, Assaf Mosquna, Andreas Holzinger, Pierre-Marc Delaux, Chi Zhang, Jinling Huang, Marek Mutwil, Jan de Vries, Yanbin Yin
Chromosome-level genomes of multicellular algal sisters to land plants illuminate signaling network evolution. bioRxiv : the preprint server for biology (2023)
Annie Lebreton, Nianwu Tang, Alan Kuo, Kurt M LaButti, William Andreopoulos, Elodie Drula, Shingo Miyauchi, Kerrie W Barry, Alicia Clum, Anna Lipzen, Daniel Mousain, Vivian Ng, Ran Wang, Yu-Cheng Dai, Bernard Henrissat, Igor V Grigoriev, Alexis Guerin-Laguette, Fu-Qiang Yu, Francis M Martin
Comparative genomics reveals a dynamic genome evolution in the ectomycorrhizal milk-cap (Lactarius) mushrooms. The New phytologist 235 (1) (2022)
Yi-Fei Sun, Annie Lebreton, Jia-Hui Xing, Yu-Xuan Fang, Jing Si, Emmanuelle Morin, Shingo Miyauchi, Elodie Drula, Steven Ahrendt, Kelly Cobaugh, Anna Lipzen, Maxim Koriabine, Robert Riley, Annegret Kohler, Kerrie W Barry, Bernard Henrissat, Igor V Grigoriev, Francis M Martin, Bao-Kai Cui
Phylogenomics and Comparative Genomics Highlight Specific Genetic Features in Ganoderma Species. Journal of fungi (Basel, Switzerland) 8 (3) (2022)
Kathryn J Michel, Dayane Cristina Lima, Hope Hundley, Vasanth R Singan, Yuko Yoshinaga, Christopher Daum, Kerrie W Barry, Karl W Broman, Carol Robin Buell, Natalia de Leon, Shawn M Kaeppler
Genetic mapping and prediction of flowering time and plant height in a maize Stiff Stalk MAGIC population. Genetics 221 (2) (2022)
Anthony Duncan, Kerrie W Barry, Chris Daum, Emiley Eloe-Fadrosh, Simon Roux, Katrin Schmidt, Susannah G Tringe, Klaus U Valentin, Neha Varghese, Asaf Salamov, Igor V Grigoriev, Richard M Leggett, Vincent Moulton, Thomas Mock
Metagenome-assembled genomes of phytoplankton microbiomes from the Arctic and Atlantic Oceans. Microbiome 10 (1) (2022)
Degao Liu, Dan Tang, Meng Xie, Jin Zhang, Longmei Zhai, Jiangping Mao, Chao Luo, Anna Lipzen, Yu Zhang, Emily Savage, Guoliang Yuan, Hao-Bo Guo, Dimiru Tadesse, Rongbin Hu, Sara S Jawdy, Hua Cheng, Linling Li, Huseyin Yer, Miranda M Clark, Huayu Sun, Jiyuan Shi, Roshani Budhathoki, Rahul Kumar, Troy Kamuda, Yanjun Li, Christa Pennacchio, Kerrie W Barry, Jeremy Schmutz, Rajiv J Berry, Wellington Muchero, Jin-Gui Chen, Yi Li, Gerald A Tuskan, Xiaohan Yang
Agave REVEILLE1 regulates the onset and release of seasonal dormancy in Populus. Plant physiology (2022)
Valerie A Buijs, Johannes Z Groenewald, Sajeet Haridas, Kurt M LaButti, Anna Lipzen, Francis M Martin, Kerrie W Barry, Igor V Grigoriev, Pedro W Crous, Michael F Seidl
Enemy or ally: a genomic approach to elucidate the lifestyle of Phyllosticta citrichinaensis. G3 (Bethesda, Md.) 12 (5) (2022)
William P Bewg, Scott A Harding, Nancy L Engle, Brajesh N Vaidya, Ran Zhou, Jacob Reeves, Thomas W Horn, Nirmal Joshee, Jerry W Jenkins, Shengqiang Shu, Kerrie W Barry, Yuko Yoshinaga, Jerry W Jenkins, Robert J Schmitz, Jeremy Schmutz, Timothy J Tschaplinski, Chung-Jui Tsai
Multiplex knockout of trichome-regulating MYB duplicates in hybrid poplar using a single gRNA. Plant physiology 189 (2) (2022)
Yue Hao, Makenzie E Mabry, Patrick P Edger, Michael Freeling, Chunfang Zheng, Lingling Jin, Robert VanBuren, Marivi Colle, Hong An, R Shawn Abrahams, Jacob D Washburn, Xinshuai Qi, Kerrie W Barry, Christopher Daum, Shengqiang Shu, Jeremy Schmutz, David Sankoff, Michael S Barker, Eric Lyons, Joseph Chris Pires, Gavin C Conant
The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible. Genome research 31 (5) (2021)
Benjamin Dauphin, Maíra de Freitas Pereira, Annegret Kohler, Igor V Grigoriev, Kerrie W Barry, Hyunsoo Na, Mojgan Amirebrahimi, Anna Lipzen, Francis M Martin, Martina Peter, Daniel Croll
Cryptic genetic structure and copy-number variation in the ubiquitous forest symbiotic fungus Cenococcum geophilum. Environmental microbiology 23 (11) (2021)
Gang Wu, Shingo Miyauchi, Emmanuelle Morin, Alan Kuo, Elodie Drula, Torda Varga, Annegret Kohler, Bang Feng, Yang Cao, Anna Lipzen, Christopher Daum, Hope Hundley, Jasmyn Pangilinan, Jenifer Johnson, Kerrie W Barry, Kurt M LaButti, Vivian Ng, Steven R Ahrendt, Byoungnam Min, In-Geol Choi, Hongjae Park, Jonathan M Plett, John M Gladden, Joseph W Spatafora, László G Nagy, Bernard Henrissat, Igor V Grigoriev, Zhu-Liang Yang, Jian-Ping Xu, Francis M Martin
Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales. The New phytologist (2021)
Sarah B Carey, Jerry W Jenkins, John T Lovell, Florian Maumus, Avinash Sreedasyam, Adam C Payton, Shengqiang Shu, George P Tiley, Noe Fernandez Pozo, Adam L Healey, Kerrie W Barry, Cindy Chen, Mei Wang, Anna Lipzen, Christopher Daum, Christopher A Saski, Jordan C McBreen, Roth E Conrad, Leslie M Kollar, Sanna Olsson, Sanna Huttunen, Jacob B Landis, J Gordon Burleigh, Norman J Wickett, Matthew G Johnson, Stefan Andreas Rensing, Jerry W Jenkins, Jeremy Schmutz, Stuart F McDaniel
Gene-rich UV sex chromosomes harbor conserved regulators of sexual development. Science advances 7 (27) (2021)
Lotus A Lofgren, Nhu H Nguyen, Rytas Vilgalys, Joske Ruytinx, Hui-Ling Liao, Sara Branco, Alan Kuo, Kurt M LaButti, Anna Lipzen, William Andreopoulos, Jasmyn Pangilinan, Robert Riley, Hope Hundley, Hyunsoo Na, Kerrie W Barry, Igor V Grigoriev, Jason E Stajich, Peter G Kennedy
Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi. The New phytologist 230 (2) (2021)
Noe Fernandez Pozo, Fabian B Haas, Rabea Meyberg, Kristian Karsten Ullrich, Manuel Hiss, Pierre-François Perroud, Sebastian Hanke, Viktor Kratz, Adrian F Powell, Eleanor F Vesty, Christopher G Daum, Matthew Zane, Anna Lipzen, Avinash Sreedasyam, Jane Grimwood, Juliet C Coates, Kerrie W Barry, Jeremy Schmutz, Lukas A Mueller, Stefan Andreas Rensing
PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens. The Plant journal : for cell and molecular biology 102 (1) (2020)
José Eduardo Marqués-Gálvez, Shingo Miyauchi, Francesco Paolocci, Alfonso Navarro-Ródenas, Francisco Arenas, Manuela Pérez-Gilabert, Emmanuelle Morin, Lucas Auer, Kerrie W Barry, Alan Kuo, Igor V Grigoriev, Francis M Martin, Annegret Kohler, Asunción Morte
Desert truffle genomes reveal their reproductive modes and new insights into plant-fungal interaction and ectendomycorrhizal lifestyle. The New phytologist 229 (5) (2020)
Peter A Crisp, Reza K Hammond, Peng Zhou, Brieanne Vaillancourt, Anna Lipzen, Chris Daum, Kerrie W Barry, Natalia de Leon, Carol Robin Buell, Shawn M Kaeppler, Blake C Meyers, Candice N Hirsch, Springer M Nathan
Variation and Inheritance of Small RNAs in Maize Inbreds and F1 Hybrids. Plant physiology 182 (1) (2019)
S V Balasundaram, Jaqueline Hess, Mikael Brandström Durling, Suzy Clare Moody, L Thorbek, Cinzia Progida, Kurt M LaButti, A Aerts, Kerrie W Barry, Igor V Grigoriev, Lynne Boddy, N Högberg, Håvard Kauserud, Daniel C Eastwood, Inger Skrede
The fungus that came in from the cold: dry rot's pre-adapted ability to invade buildings. The ISME journal 12 (3) (2018)
Danièle L Filiault, Evangeline S Ballerini, Terezie Mandáková, Gökçe Aköz, Nathan J Derieg, Jeremy Schmutz, Jerry Jenkins, Jane Grimwood, Shengqiang Shu, Richard D Hayes, Uffe Hellsten, Kerrie W Barry, Juying Yan, Sirma Mihaltcheva, Miroslava Karafiátová, Viktoria Nizhynska, Elena M Kramer, Martin A Lysak, Scott A Hodges, Magnus Nordborg
The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history. eLife 7 (2018)
Guotian Li, Rashmi Jain, Mawsheng Chern, Nikki T Pham, Joel A Martin, Tong Wei, Wendy S Schackwitz, Anna M Lipzen, Phat Q Duong, Kyle C Jones, Liangrong Jiang, Deling Ruan, Diane Bauer, Yi Peng, Kerrie W Barry, Jeremy Schmutz, Pamela C Ronald
The Sequences of 1504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies. The Plant cell 29 (6) (2017)

Kerrie W Barry.css-eqlu8i{font-size:small;padding-left:4px;} (Kerrie Barry, K Barry)

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Kerrie W Barry (Kerrie Barry, K Barry)