Simon A Mallal (Simon Mallal)

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 12

Top Topics

Respiratory Syndrome Coronavirus

Men Who Have Sex With Men

Top Venues

Journal of immunology (Baltimore, Md. : 1950)

bioRxiv : the preprint server for biology

Genome research

This page only lists publications with an associated author ORCID identifier.

Publications

Evan A Clark, Edward Ryan R Talatala, Wenda Ye, Ruth J Davis, Samuel L Collins, Alexander T Hillel, Marisol Ramirez-Solano, Quanhu Shen, Celestine N Wanjalla, Simon A Mallal, Alexander Gelbard
Characterizing the T Cell Repertoire in the Proximal Airway in Health and Disease. The Laryngoscope (2023)
Payel Roy, John Sidney, Cecilia S Lindestam Arlehamn, Elizabeth Phillips, Simon A Mallal, Sujit Silas Armstrong Suthahar, Monica Billitti, Paul Rubiro, Daniel Marrama, Fabrizio Drago, Jenifer Vallejo, Vasantika Suryawanshi, Marco Orecchioni, Jeffrey Makings, Paul J Kim, Coleen A McNamara, Bjoern Peters, Alessandro Sette, Klaus Ley
Immunodominant MHC-II (Major Histocompatibility Complex II) Restricted Epitopes in Human Apolipoprotein B. Circulation research 131 (3) (2022)
Ayoda T Werede, James G Terry, Sangeeta Nair, Tecla M Temu, Bryan E Shepherd, Samuel S Bailin, Mona Mashayekhi, Curtis L Gabriel, Morgan Lima, Beverly Owen Woodward, LaToya Hannah, Simon A Mallal, Joshua A Beckman, Jonathan Z Li, Jesse Fajnzylber, David G Harrison, John Jeffrey Carr, John R Koethe, Celestine N Wanjalla
Mean Coronary Cross-Sectional Area as a Measure of Arterial Remodeling Using Noncontrast CT Imaging in Persons With HIV. Journal of the American Heart Association 11 (23) (2022)
Shay Leary, Silvana Gaudieri, Matthew D Parker, Abha Chopra, Ian James, Suman B Pakala, Eric Alves, Mina John, Benjamin B Lindsey, Alexander J Keeley, Sarah L Rowland-Jones, Maurice S Swanson, David A Ostrov, Jodi L Bubenik, Suman R Das, John Sidney, Alessandro Sette, null null, Thushan I de Silva, Elizabeth Phillips, Simon A Mallal
Generation of a novel SARS-CoV-2 sub-genomic RNA due to the R203K/G204R variant in nucleocapsid: homologous recombination has potential to change SARS-CoV-2 at both protein and RNA level. bioRxiv : the preprint server for biology (2021)
Matthew D Parker, Benjamin B Lindsey, Shay Leary, Silvana Gaudieri, Abha Chopra, Matthew Wyles, Adrienn Angyal, Luke R Green, Paul Parsons, Rachel M Tucker, Rebecca Brown, Danielle Groves, Katie Johnson, Laura Carrilero, Joe Heffer, David G Partridge, Cariad Evans, Mohammad Raza, Alexander J Keeley, Nikki Smith, Ana da Silva Filipe, James G Shepherd, Chris Davis, Sahan Bennett, Vattipally B Sreenu, Alain Kohl, Elihu Aranday-Cortes, Lily Tong, Jenna Nichols, Emma C Thomson, null null, Dennis Wang, Simon A Mallal, Thushan I de Silva
Subgenomic RNA identification in SARS-CoV-2 genomic sequencing data. Genome research 31 (4) (2021)
Charline Bacchus-Souffan, Mark D Fitch, Jori Symons, Mohamed Abdel-Mohsen, Daniel B Reeves, Rebecca Hoh, Mars Stone, Joseph Hiatt, Peggy Kim, Abha Chopra, Haelee Ahn, Vanessa A York, Daniel L Cameron, Frederick M Hecht, Jeffrey N Martin, Steven A Yukl, Simon A Mallal, Paul U Cameron, Steven G Deeks, Joshua T Schiffer, Sharon R Lewin, Marc K Hellerstein, Joseph M McCune, Peter W Hunt
Relationship between CD4 T cell turnover, cellular differentiation and HIV persistence during ART. PLoS pathogens 17 (1) (2021)
Margaret L Axelrod, Mellissa J Nixon, Paula I Gonzalez Ericsson, Riley E Bergman, Mark A Pilkinton, Wyatt J McDonnell, Violeta Sanchez, Susan R Opalenik, Sherene Loi, Jing Zhou, Sean Mackay, Brent N Rexer, Vandana G Abramson, Valerie M Jansen, Simon A Mallal, Joshua Donaldson, Sara M Tolaney, Ian E Krop, Ana Christina Garrido-Castro, Jonathan D Marotti, Kevin Shee, Todd W Miller, Melinda E Sanders, Ingrid A Mayer, Roberto Salgado, Justin M Balko
Changes in Peripheral and Local Tumor Immunity after Neoadjuvant Chemotherapy Reshape Clinical Outcomes in Patients with Breast Cancer. Clinical cancer research : an official journal of the American Association for Cancer Research 26 (21) (2020)
Alison Tarke, John Sidney, Conner K Kidd, Jennifer M Dan, Sydney I Ramirez, Esther Dawen Yu, Jose Mateus, Ricardo da Silva Antunes, Erin Moore, Paul Rubiro, Nils Methot, Elizabeth Phillips, Simon A Mallal, April Frazier, Stephen A Rawlings, Jason A Greenbaum, Bjoern Peters, Davey M Smith, Shane Crotty, Daniela Weiskopf, Alba Grifoni, Alessandro Sette
Comprehensive analysis of T cell immunodominance and immunoprevalence of SARS-CoV-2 epitopes in COVID-19 cases. bioRxiv : the preprint server for biology (2020)
Jose Mateus, Alba Grifoni, Alison Tarke, John Sidney, Sydney I Ramirez, Jennifer M Dan, Zoe C Burger, Stephen A Rawlings, Davey M Smith, Elizabeth Jane Phillips, Simon A Mallal, Marshall Lammers, Paul Rubiro, Lorenzo Quiambao, Aaron Sutherland, Esther Dawen Yu, Ricardo da Silva Antunes, Jason A Greenbaum, April Frazier, Alena Janda Markmann, Lakshmanane Premkumar, Arivianda M DeSilva, Bjoern Peters, Shane Crotty, Alessandro Sette, Daniela Weiskopf
Selective and cross-reactive SARS-CoV-2 T cell epitopes in unexposed humans. Science (New York, N.Y.) 370 (6512) (2020)
Jennifer Currenti, Abha Chopra, Mina John, Shay Leary, Elizabeth McKinnon, Eric Alves, Mark Pilkinton, Rita Smith, Louise Barnett, Wyatt J McDonnell, Michaela Lucas, Francine Noel, Simon A Mallal, Joseph A Conrad, Spyros A Kalams, Silvana Gaudieri
Deep sequence analysis of HIV adaptation following vertical transmission reveals the impact of immune pressure on the evolution of HIV. PLoS pathogens 15 (12) (2019)
Cecilia S Lindestam Arlehamn, John Pham, Roy N Alcalay, April Frazier, Evan Shorr, Chelsea Carpenter, John Sidney, Rekha Dhanwani, Julian Agin-Liebes, Francesca Garretti, Amy W Amara, David G Standaert, Elizabeth J Phillips, Simon A Mallal, Bjoern Peters, David Sulzer, Alessandro Sette
Widespread Tau-Specific CD4 T Cell Reactivity in the General Population. Journal of immunology (Baltimore, Md. : 1950) 203 (1) (2019)
Chike Osita Abana, Mark A Pilkinton, Silvana Gaudieri, Abha Chopra, Wyatt J McDonnell, Celestine Wanjalla, Louise Barnett, Rama Gangula, Cindy Hager, Dae K Jung, Brian G Engelhardt, Madan H Jagasia, Paul Klenerman, Elizabeth J Phillips, David M Koelle, Spyros A Kalams, Simon A Mallal
Cytomegalovirus (CMV) Epitope-Specific CD4+ T Cells Are Inflated in HIV+ CMV+ Subjects. Journal of immunology (Baltimore, Md. : 1950) 199 (9) (2017)