Swapnil Mishra

ORCID

Publication Activity (10 Years)

Years Active: 2020-2023
Publications (10 Years): 26

Top Venues

Nature communications

Science (New York, N.Y.)

PLOS global public health

PLoS computational biology

Imperial College London

Australian National University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Imperial College London

United Kingdom

Post Doc :: Department of Infectious Diseases and Epidemiology

Australian National University

Australia

Teaching Assistant :: Research School of Computer Science

Education History

Australian National University

Australia

PHD :: Research School of Computer Science

Australian National University

Australia

MSC :: Research School of Computer Science

Maharashtra Institute of Technology

India

BSC :: Department of Computer Engineering

Publications

Alexandros Katsiferis, Samir Bhatt, Laust Hvas Mortensen, Swapnil Mishra, Majken Karoline Jensen, Rudi Gerardus Johannes Westendorp
Machine learning models of healthcare expenditures predicting mortality: A cohort study of spousal bereaved Danish individuals. PloS one 18 (8) (2023)
Ritoban Kundu, Jyotishka Datta, Debashree Ray, Swapnil Mishra, Rupam Bhattacharyya, Lauren Zimmermann, Bhramar Mukherjee
Comparative impact assessment of COVID-19 policy interventions in five South Asian countries using reported and estimated unreported death counts during 2020-2021. PLOS global public health 3 (12) (2023)
Ritoban Kundu, Jyotishka Datta, Debashree Ray, Swapnil Mishra, Rupam Bhattacharyya, Lauren Zimmermann, Bhramar Mukherjee
Comparative impact assessment of COVID-19 policy interventions in five South Asian countries using reported and estimated unreported death counts during 2020-2021. PLOS global public health 3 (12) (2023)
Ritoban Kundu, Jyotishka Datta, Debashree Ray, Swapnil Mishra, Rupam Bhattacharyya, Lauren Zimmermann, Bhramar Mukherjee
Comparative impact assessment of COVID-19 policy interventions in five South Asian countries using reported and estimated unreported death counts during 2020-2021. PLOS global public health 3 (12) (2023)
Iwona Hawryluk, Swapnil Mishra, Seth Flaxman, Samir Bhatt, Thomas A Mellan
Application of referenced thermodynamic integration to Bayesian model selection. PloS one 18 (8) (2023)
Andrea Brizzi, Charles Whittaker, Luciana M S Servo, Iwona Hawryluk, Carlos A Prete, William Marciel de Souza, Renato S Aguiar, Leonardo José Tadeu de Araújo, Leonardo Soares Bastos, Alexandra Blenkinsop, Lewis F Buss, Darlan Candido, Marcia Caldas de Castro, Silvia F Costa, Julio Croda, Andreza Aruska de Souza-Santos, Christopher Dye, Seth Flaxman, Paula L C Fonseca, Victor E V Geddes, Bernardo Gutierrez, Philippe Lemey, Anna S Levin, Thomas Mellan, Diego Menezes Bonfim, Xenia Miscouridou, Swapnil Mishra, Mélodie Monod, Filipe R R Moreira, Bruce Walker Nelson, Rafael Henrique Moraes Pereira, Otávio Tavares Ranzani, Ricardo P Schnekenberg, Elizaveta Semenova, Raphael Sonabend, Renan Pedra de Souza, Xiaoyue Xi, Ester C Sabino, Nuno Rodrigues Faria, Samir Bhatt, Oliver Ratmann
Spatial and temporal fluctuations in COVID-19 fatality rates in Brazilian hospitals. Nature medicine 28 (7) (2022)
George Altman, Janvi Ahuja, Joshua Teperowski Monrad, Gurpreet Dhaliwal, Charlie Rogers-Smith, Gavin Leech, Benedict Snodin, Jonas B Sandbrink, Lukas Finnveden, Alexander John Norman, Sebastian B Oehm, Julia Fabienne Sandkühler, Jan Kulveit, Seth Flaxman, Yarin Gal, Swapnil Mishra, Samir Bhatt, Mrinank Sharma, Sören Mindermann, Jan Markus Brauner
A dataset of non-pharmaceutical interventions on SARS-CoV-2 in Europe. Scientific data 9 (1) (2022)
Swapnil Mishra, Seth Flaxman, Tresnia Berah, Harrison Zhu, Mikko Pakkanen, Samir Bhatt
π VAE: a stochastic process prior for Bayesian deep learning with MCMC. Statistics and computing 32 (6) (2022)
Nicholas F Brazeau, Robert J Verity, Sara Jenks, Han Fu, Charles Whittaker, Peter Winskill, Ilaria Dorigatti, Patrick G T Walker, Steven Riley, Ricardo P Schnekenberg, Henrique Hoeltgebaum, Thomas A Mellan, Swapnil Mishra, H Juliette T Unwin, Oliver John Watson, Zulma M Cucunubá, Marc Baguelin, Lilith K Whittles, Samir Bhatt, Azra C Ghani, Neil M Ferguson, Lucy C Okell
Estimating the COVID-19 infection fatality ratio accounting for seroreversion using statistical modelling. Communications medicine 2 (2022)
Elizaveta Semenova, Yidan Xu, Adam Howes, Theo Rashid, Samir Bhatt, Swapnil Mishra, Seth R Flaxman
PriorVAE: encoding spatial priors with variational autoencoders for small-area estimation. Journal of the Royal Society, Interface 19 (191) (2022)
Erik M Volz, Swapnil Mishra, Meera Chand, Jeffrey C Barrett, Robert Johnson, Lily Geidelberg, Wes R Hinsley, Daniel J Laydon, Gavin Dabrera, Áine O'Toole, Robert Amato, Manon Ragonnet-Cronin, Ian Harrison, Benjamin C Jackson, Cristina V Ariani, Olivia Boyd, Nicholas J Loman, John T McCrone, Sónia Gonçalves, David Jorgensen, Richard Myers, Verity Hill, David K Jackson, Katy A M Gaythorpe, Natalie Groves, John Sillitoe, Dominic P Kwiatkowski, null null, Seth R Flaxman, Oliver Ratmann, Samir Bhatt, Susan Hopkins, Axel Gandy, Andrew Rambaut, Neil M Ferguson
Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England. Nature 593 (7858) (2021)
Nuno Rodrigues Faria, Thomas A Mellan, Charles Whittaker, Ingra Morales Claro, Darlan da Silva Candido, Swapnil Mishra, Myuki A E Crispim, Flávia Cristina Silva Sales, Iwona Hawryluk, John T McCrone, Ruben J G Hulswit, Lucas Augusto Moysés Franco, Mariana Severo Ramundo, Jaqueline Góes de Jesus, Pamela Dos Santos Andrade, Thaís de Moura Coletti, Giulia M Ferreira, Camila Alves Maia da Silva, Erika Regina Manuli, Rafael Henrique Moraes Pereira, Pedro S Peixoto, Moritz U G Kraemer, Nelson Gaburo-Júnior, Cecilia da C Camilo, Henrique H Hoeltgebaum, William Marciel de Souza, Esmenia C Rocha, Leandro Menezes de Souza, Mariana C de Pinho, Leonardo José Tadeu de Araújo, Frederico Scott Varella Malta, Aline Brito de Lima, Joice do Prado Silva, Danielle A G Zauli, Alessandro C de S Ferreira, Ricardo P Schnekenberg, Daniel J Laydon, Patrick G T Walker, Hannah M Schlüter, Ana L P Dos Santos, Maria S Vidal, Valentina S Del Caro, Rosinaldo M F Filho, Helem M Dos Santos, Renato Santana de Aguiar, José Luis Proença Modena, Bruce Walker Nelson, James A Hay, Mélodie Monod, Xenia Miscouridou, Helen Coupland, Raphael Sonabend, Michaela A C Vollmer, Axel Gandy, Carlos Augusto Prete Junior, Vítor Heloiz Nascimento, Marc A Suchard, Thomas A Bowden, Sergei L K Pond, Chieh-Hsi Wu, Oliver Ratmann, Neil M Ferguson, Christopher Dye, Nicholas James Loman, Philippe Lemey, Andrew Rambaut, Nelson A Fraiji, Maria do P S S Carvalho, Oliver George Pybus, Seth R Flaxman, Samir Bhatt, Ester Cerdeira Sabino
Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil. Science (New York, N.Y.) 372 (6544) (2021)
Konrad Krawczyk, Tadeusz Chelkowski, Daniel J Laydon, Swapnil Mishra, Denise Xifara, Benjamin Gibert, Seth R Flaxman, Thomas A Mellan, Veit Schwämmle, Richard Röttger, Johannes Thorling Hadsund, Samir Bhatt
Quantifying Online News Media Coverage of the COVID-19 Pandemic: Text Mining Study and Resource. Journal of medical Internet research 23 (6) (2021)
Andrea Brizzi, Charles Whittaker, Luciana M S Servo, Iwona Hawryluk, Carlos A Prete, William Marciel de Souza, Renato S Aguiar, Leonardo J T Araujo, Leonardo S Bastos, Alexandra Blenkinsop, Lewis F Buss, Darlan Candido, Marcia C Castro, Silvia F Costa, Julio Croda, Andreza Aruska de Souza-Santos, Christopher Dye, Seth Flaxman, Paula L C Fonseca, Victor E V Geddes, Bernardo Gutierrez, Philippe Lemey, Anna S Levin, Thomas Mellan, Diego M Bonfim, Xenia Miscouridou, Swapnil Mishra, Mélodie Monod, Filipe R R Moreira, Bruce Nelson, Rafael H M Pereira, Otavio Ranzani, Ricardo P Schnekenberg, Elizaveta Semenova, Raphael Sonnabend, Renan P Souza, Xiaoyue Xi, Ester Cerdeira Sabino, Nuno R Faria, Samir Bhatt, Oliver Ratmann
Report 46: Factors driving extensive spatial and temporal fluctuations in COVID-19 fatality rates in Brazilian hospitals. medRxiv : the preprint server for health sciences (2021)
Swapnil Mishra, James A Scott, Daniel J Laydon, Seth Flaxman, Axel Gandy, Thomas A Mellan, H Juliette T Unwin, Michaela Vollmer, Helen Coupland, Oliver Ratmann, Melodie Monod, Harrison H Zhu, Anne Cori, Katy A M Gaythorpe, Lilith K Whittles, Charles Whittaker, Christl Ann Donnelly, Neil M Ferguson, Samir Bhatt
Comparing the responses of the UK, Sweden and Denmark to COVID-19 using counterfactual modelling. Scientific reports 11 (1) (2021)
Konrad Krawczyk, Tadeusz Chelkowski, Daniel J Laydon, Swapnil Mishra, Denise Xifara, Benjamin Gibert, Seth R Flaxman, Thomas A Mellan, Veit Schwämmle, Richard Röttger, Johannes Thorling Hadsund, Samir Bhatt
Correction: Quantifying Online News Media Coverage of the COVID-19 Pandemic: Text Mining Study and Resource. Journal of medical Internet research 23 (7) (2021)
Amelia Bertozzi-Villa, Caitlin A Bever, Hannah Koenker, Daniel J Weiss, Camilo Vargas-Ruiz, Anita K Nandi, Harry S Gibson, Joseph Harris, Katherine E Battle, Susan F Rumisha, Suzanne Keddie, Punam Amratia, Rohan Arambepola, Ewan Cameron, Elisabeth G Chestnutt, Emma L Collins, Justin Millar, Swapnil Mishra, Jennifer Rozier, Tasmin Symons, Katherine A Twohig, T Deirdre Hollingsworth, Peter W Gething, Samir Bhatt
Maps and metrics of insecticide-treated net access, use, and nets-per-capita in Africa from 2000-2020. Nature communications 12 (1) (2021)
Daniel J Laydon, Swapnil Mishra, Wes R Hinsley, Pantelis Samartsidis, Seth Flaxman, Axel Gandy, Neil M Ferguson, Samir Bhatt
Modelling the impact of the tier system on SARS-CoV-2 transmission in the UK between the first and second national lockdowns. BMJ open 11 (4) (2021)
Manon Ragonnet-Cronin, Olivia Boyd, Lily Geidelberg, David Jorgensen, Fabricia F Nascimento, Igor Siveroni, Robert A Johnson, Marc Baguelin, Zulma M Cucunubá, Elita Jauneikaite, Swapnil Mishra, Oliver John Watson, Neil M Ferguson, Anne Cori, Christl Ann Donnelly, Erik M Volz
Genetic evidence for the association between COVID-19 epidemic severity and timing of non-pharmaceutical interventions. Nature communications 12 (1) (2021)
Mahesh S Dhar, Robin Marwal, Radhakrishnan Vs, Kalaiarasan Ponnusamy, Bani Jolly, Rahul C Bhoyar, Viren Sardana, Salwa Naushin, Mercy Rophina, Thomas A Mellan, Swapnil Mishra, Charles Whittaker, Saman Fatihi, Meena Datta, Priyanka Singh, Uma Sharma, Rajat Ujjainiya, Nitin Bhatheja, Mohit Kumar Divakar, Manoj K Singh, Mohamed Imran, Vigneshwar Senthivel, Ranjeet Maurya, Neha Jha, Priyanka Mehta, Vivekanand Asokachandran, Pooja Sharma, Arvinden Vr, Urmila Chaudhary, Namita Soni, Lipi Thukral, Seth R Flaxman, Samir Bhatt, Rajesh Pandey, Debasis Dash, Mohammed Faruq, Hemlata Lall, Hema Gogia, Preeti Madan, Sanket Kulkarni, Himanshu Chauhan, Shantanu Sengupta, Sandhya Kabra, null null, Ravindra Kumar Gupta, Sujeet K Singh, Anurag Agrawal, Partha Rakshit, Vinay Nandicoori, Karthik Bharadwaj Tallapaka, Divya Tej Sowpati, K Thangaraj, Murali Dharan Bashyam, Ashwin Dalal, Sridhar Sivasubbu, Vinod Scaria, Ajay Parida, Sunil K Raghav, Punit Prasad, Apurva Sarin, Satyajit Mayor, Uma Ramakrishnan, Dasaradhi Palakodeti, Aswin Sai Narain Seshasayee, Manoj Bhat, Yogesh Shouche, Ajay Pillai, Tanzin Dikid, Saumitra Das, Arindam Maitra, Sreedhar Chinnaswamy, Nidhan Kumar Biswas, Anita Sudhir Desai, Chitra Pattabiraman, M V Manjunatha, Reeta S Mani, Gautam Arunachal Udupi, Priya Abraham, Potdar Varsha Atul, Sarah S Cherian
Genomic characterization and epidemiology of an emerging SARS-CoV-2 variant in Delhi, India. Science (New York, N.Y.) 374 (6570) (2021)
H Juliette T Unwin, Isobel Routledge, Seth Flaxman, Marian-Andrei Rizoiu, Shengjie Lai, Justin M Cohen, Daniel J Weiss, Swapnil Mishra, Samir Bhatt
Using Hawkes Processes to model imported and local malaria cases in near-elimination settings. PLoS computational biology 17 (4) (2021)
Mélodie Monod, Alexandra Blenkinsop, Xiaoyue Xi, Daniel Hebert, Sivan Bershan, Simon Tietze, Marc Baguelin, Valerie C Bradley, Yu Chen, Helen Coupland, Sarah Filippi, Jonathan Ish-Horowicz, Martin McManus, Thomas A Mellan, Axel Gandy, Michael Hutchinson, H Juliette T Unwin, Sabine L van Elsland, Michaela A C Vollmer, Sebastian Weber, Harrison Zhu, Anne Bezancon, Neil M Ferguson, Swapnil Mishra, Seth R Flaxman, Samir Bhatt, Oliver Ratmann, null null
Age groups that sustain resurging COVID-19 epidemics in the United States. Science (New York, N.Y.) 371 (6536) (2021)
Mrinank Sharma, Sören Mindermann, Charlie Rogers-Smith, Gavin Leech, Benedict Snodin, Janvi Ahuja, Jonas B Sandbrink, Joshua Teperowski Monrad, George Altman, Gurpreet Dhaliwal, Lukas Finnveden, Alexander John Norman, Sebastian B Oehm, Julia Fabienne Sandkühler, Laurence Aitchison, Tomáš Gavenčiak, Thomas Mellan, Jan Kulveit, Leonid Chindelevitch, Seth R Flaxman, Yarin Gal, Swapnil Mishra, Samir Bhatt, Jan Markus Brauner
Understanding the effectiveness of government interventions against the resurgence of COVID-19 in Europe. Nature communications 12 (1) (2021)
Darlan da Silva Candido, Ingra Morales Claro, Jaqueline Góes de Jesus, William Marciel de Souza, Filipe Romero Rebello Moreira, Simon Dellicour, Thomas A Mellan, Louis du Plessis, Rafael Henrique Moraes Pereira, Flávia Cristina Silva Sales, Erika Regina Manuli, Julien Thézé, Luiz Gonzaga Paula de Almeida, Mariane Talon de Menezes, Carolina Moreira Voloch, Marcilio Jorge Fumagalli, Thaís de Moura Coletti, Camila Alves Maia da Silva, Mariana Severo Ramundo, Mariene Ribeiro Amorim, Henrique H Hoeltgebaum, Swapnil Mishra, Mandev S Gill, Luiz Max Fagundes de Carvalho, Lewis Fletcher Buss, Carlos Augusto Prete Junior, Jordan Ashworth, Helder Takashi Imoto Nakaya, Pedro S Peixoto, Oliver J Brady, Samuel M Nicholls, Amilcar Tanuri, Atila Duque Rossi, Carlos K V Braga, Alexandra Lehmkuhl Gerber, Ana Paula de Campos Guimarães, Nelson Gaburo, Cecilia Salete Alencar, Alessandro C de S Ferreira, Cristiano X Lima, José Eduardo Levi, Celso Granato, Giulia M Ferreira, Ronaldo S Francisco, Fabiana Granja, Márcia Teixeira Garcia, Maria Luiza Moretti, Mauricio Wesley Perroud Junior, Terezinha Marta Pereira Pinto Castiñeiras, Carolina S Lazari, Sarah C Hill, Andreza Aruska de Souza Santos, Camila Lopes Simeoni, Julia Forato, Andrei Carvalho Sposito, Angélica Zaninelli Schreiber, Magnun N N Santos, Camila Zolini de Sá, Renan Pedra de Souza, Luciana C Resende-Moreira, Mauro Martins Texeira, Josy Hubner, Patrícia Falabella Leme, Rennan Garcias Moreira, Mauricio Lacerda Nogueira, null null, Neil M Ferguson, Sílvia Figueiredo Costa, José Luis Proença Modena, Ana Tereza Ribeiro de Vasconcelos, Samir Bhatt, Philippe Lemey, Chieh-Hsi Wu, Andrew Rambaut, Nicholas James Loman, Renato Santana de Aguiar, Oliver George Pybus, Ester Cerdeira Sabino, Nuno Rodrigues Faria
Evolution and epidemic spread of SARS-CoV-2 in Brazil. Science (New York, N.Y.) 369 (6508) (2020)
Isobel Routledge, Shengjie Lai, Katherine E Battle, Azra C Ghani, Manuel Gomez-Rodriguez, Kyle B Gustafson, Swapnil Mishra, H Juliette T Unwin, Joshua L Proctor, Andrew J Tatem, Zhongjie Li, Samir Bhatt
Tracking progress towards malaria elimination in China: Individual-level estimates of transmission and its spatiotemporal variation using a diffusion network approach. PLoS computational biology 16 (3) (2020)
H Juliette T Unwin, Swapnil Mishra, Valerie C Bradley, Axel Gandy, Thomas A Mellan, Helen Coupland, Jonathan Ish-Horowicz, Michaela A C Vollmer, Charles Whittaker, Sarah L Filippi, Xiaoyue Xi, Mélodie Monod, Oliver Ratmann, Michael Hutchinson, Fabian Valka, Harrison Zhu, Iwona Hawryluk, Philip Milton, Kylie E C Ainslie, Marc Baguelin, Adhiratha Boonyasiri, Nick F Brazeau, Lorenzo Cattarino, Zulma Cucunuba, Gina Cuomo-Dannenburg, Ilaria Dorigatti, Oliver D Eales, Jeffrey W Eaton, Sabine L van Elsland, Richard G FitzJohn, Katy A M Gaythorpe, William Green, Wes Hinsley, Benjamin Jeffrey, Edward Knock, Daniel J Laydon, John A Lees, Gemma Nedjati-Gilani, Pierre Nouvellet, Lucy C Okell, Kris Varun Parag, Igor Siveroni, Hayley A Thompson, Patrick Walker, Caroline E Walters, Oliver John Watson, Lilith K Whittles, Azra C Ghani, Neil M Ferguson, Steven Riley, Christl Ann Donnelly, Samir Bhatt, Seth R Flaxman
State-level tracking of COVID-19 in the United States. Nature communications 11 (1) (2020)

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Publication Activity (10 Years)

Top Topics

Top Venues

Swapnil Mishra