John T McCrone (J T McCrone)

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 16

Top Topics

African American

Respiratory Syndrome Coronavirus

Cross Sectional

Top Venues

Virus evolution

Science (New York, N.Y.)

Research square

This page only lists publications with an associated author ORCID identifier.

Publications

Joseph L-H Tsui, John T McCrone, Ben C Lambert, Sumali Bajaj, Rhys P D Inward, Paolo Bosetti, Rosario Evans Pena, Houriiyah Tegally, Verity Hill, Alexander Eugene Zarebski, Thomas P Peacock, Luyang Liu, Neo Wu, Megan Davis, Issac I Bogoch, Kamran Khan, Meaghan Kall, Nurin Iwani Binti Abdul Aziz, Rachel Colquhoun, Áine Niamh O'Toole, Benjamin C Jackson, Abhishek Dasgupta, Eduan Wilkinson, Tulio de Oliveira, null null, Thomas Richard Connor, Nicholas James Loman, Vittoria Colizza, Christophe Fraser, Erik M Volz, Xiang Ji, Bernardo Gutierrez, Meera Chand, Simon Dellicour, Simon Cauchemez, Jayna Ragwani, Marc A Suchard, Philippe Lemey, Andrew Rambaut, Oliver George Pybus, Moritz U G Kraemer
Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1. Science (New York, N.Y.) 381 (6655) (2023)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
John T McCrone, Verity Hill, Sumali Bajaj, Rosario Evans Pena, Ben C Lambert, Rhys P D Inward, Samir Bhatt, Erik M Volz, Christopher Ruis, Simon Dellicour, Guy Baele, Alexander E Zarebski, Adam Sadilek, Neo Wu, Aaron Schneider, Xiang Ji, Jayna Raghwani, Benjamin C Jackson, Rachel Colquhoun, Áine O'Toole, Thomas P Peacock, Kate Twohig, Simon Thelwall, Gavin Dabrera, Richard Myers, null null, Nuno Rodrigues Faria, Carmen Huber, Isaac I Bogoch, Kamran Khan, Louis du Plessis, Jeffrey C Barrett, David M Aanensen, Wendy S Barclay, Meera Chand, Thomas Richard Connor, Nicholas J Loman, Marc A Suchard, Oliver George Pybus, Andrew Rambaut, Moritz U G Kraemer
Context-specific emergence and growth of the SARS-CoV-2 Delta variant. Nature 610 (7930) (2022)
Áine Niamh O'Toole, Verity Hill, Benjamin C Jackson, Rebecca Dewar, Nikita Sahadeo, Rachel Colquhoun, Stefan Rooke, John T McCrone, Kate Duggan, Martin P McHugh, Samuel M Nicholls, Radoslaw Poplawski, null null, null null, David Aanensen, Matt Holden, Tom Connor, Nick Loman, Ian Goodfellow, Christine V F Carrington, Kate Templeton, Andrew Rambaut
Genomics-informed outbreak investigations of SARS-CoV-2 using civet. PLOS global public health 2 (12) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Alpha Kabinet Keita, Fara R Koundouno, Martin Faye, Ariane Düx, Julia Hinzmann, Haby Diallo, Ahidjo Ayouba, Frederic Le Marcis, Barré Soropogui, Kékoura Ifono, Moussa M Diagne, Mamadou S Sow, Joseph A Bore, Sebastien Calvignac-Spencer, Nicole Vidal, Jacob Camara, Mamadou B Keita, Annick Renevey, Amadou Diallo, Abdoul K Soumah, Saa L Millimono, Almudena Mari-Saez, Mamadou Diop, Ahmadou Doré, Fodé Y Soumah, Kaka Kourouma, Nathalie J Vielle, Cheikh Loucoubar, Ibrahima Camara, Karifa Kourouma, Giuditta Annibaldis, Assaïtou Bah, Anke Thielebein, Meike Pahlmann, Steven T Pullan, Miles W Carroll, Joshua Quick, Pierre B H Formenty, Anais Legand, Karla Pietro, Michael R Wiley, Noel Tordo, Christophe Peyrefitte, John T McCrone, Andrew Rambaut, Youssouf Sidibé, Mamadou D Barry, Madeleine Kourouma, Cé D Saouromou, Mamadou Condé, Moussa Baldé, Moriba Povogui, Sakoba Keita, Mandiou Diakite, Mamadou S Bah, Amadou Sidibe, Dembo Diakite, Fodé B Sako, Fodé A Traore, Georges A Ki-Zerbo, Philippe Lemey, Stephan Gunther, Liana E Kafetzopoulou, Amadou A Sall, Eric Delaporte, Sophie Duraffour, Ousmane Faye, Fabian Hubertus Leendertz, Martine Peeters, Abdoulaye Toure, N' Faly Magassouba
Resurgence of Ebola virus in 2021 in Guinea suggests a new paradigm for outbreaks. Nature 597 (7877) (2021)
Louis du Plessis, John T McCrone, Alexander Eugene Zarebski, Verity Hill, Christopher Ruis, Bernardo Gutierrez, Jayna Ragwani, Jordan Ashworth, Rachel Colquhoun, Thomas Richard Connor, Nuno Rodrigues Faria, Benjamin C Jackson, Nicholas James Loman, Áine Niamh O'Toole, Samuel M Nicholls, Kris Varun Parag, Emily Scher, Tetyana I Vasylyeva, Erik M Volz, Alexander G Watts, Isaac I Bogoch, Kamran Khan, null null, David M Aanensen, Moritz U G Kraemer, Andrew Rambaut, Oliver George Pybus
Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK. Science (New York, N.Y.) 371 (6530) (2021)
Nuno Rodrigues Faria, Thomas A Mellan, Charles Whittaker, Ingra Morales Claro, Darlan da Silva Candido, Swapnil Mishra, Myuki A E Crispim, Flávia Cristina Silva Sales, Iwona Hawryluk, John T McCrone, Ruben J G Hulswit, Lucas Augusto Moysés Franco, Mariana Severo Ramundo, Jaqueline Góes de Jesus, Pamela Dos Santos Andrade, Thaís de Moura Coletti, Giulia M Ferreira, Camila Alves Maia da Silva, Erika Regina Manuli, Rafael Henrique Moraes Pereira, Pedro S Peixoto, Moritz U G Kraemer, Nelson Gaburo-Júnior, Cecilia da C Camilo, Henrique H Hoeltgebaum, William Marciel de Souza, Esmenia C Rocha, Leandro Menezes de Souza, Mariana C de Pinho, Leonardo José Tadeu de Araújo, Frederico Scott Varella Malta, Aline Brito de Lima, Joice do Prado Silva, Danielle A G Zauli, Alessandro C de S Ferreira, Ricardo P Schnekenberg, Daniel J Laydon, Patrick G T Walker, Hannah M Schlüter, Ana L P Dos Santos, Maria S Vidal, Valentina S Del Caro, Rosinaldo M F Filho, Helem M Dos Santos, Renato Santana de Aguiar, José Luis Proença Modena, Bruce Walker Nelson, James A Hay, Mélodie Monod, Xenia Miscouridou, Helen Coupland, Raphael Sonabend, Michaela A C Vollmer, Axel Gandy, Carlos Augusto Prete Junior, Vítor Heloiz Nascimento, Marc A Suchard, Thomas A Bowden, Sergei L K Pond, Chieh-Hsi Wu, Oliver Ratmann, Neil M Ferguson, Christopher Dye, Nicholas James Loman, Philippe Lemey, Andrew Rambaut, Nelson A Fraiji, Maria do P S S Carvalho, Oliver George Pybus, Seth R Flaxman, Samir Bhatt, Ester Cerdeira Sabino
Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil. Science (New York, N.Y.) 372 (6544) (2021)
Moritz U G Kraemer, Verity Hill, Christopher Ruis, Simon Dellicour, Sumali Bajaj, John T McCrone, Guy Baele, Kris Varun Parag, Anya Lindström Battle, Bernardo Gutierrez, Benjamin C Jackson, Rachel Colquhoun, Áine Niamh O'Toole, Brennan Klein, Alessandro Vespignani, null null, Erik M Volz, Nuno Rodrigues Faria, David M Aanensen, Nicholas James Loman, Louis du Plessis, Simon Cauchemez, Andrew Rambaut, Samuel V Scarpino, Oliver George Pybus
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence. Science (New York, N.Y.) 373 (6557) (2021)
John T McCrone, Verity Hill, Sumali Bajaj, Rosario Evans Pena, Ben C Lambert, Rhys Inward, Samir Bhatt, Erik M Volz, Christopher Ruis, Simon Dellicour, Guy Baele, Alexander E Zarebski, Adam Sadilek, Neo Wu, Aaron Schneider, Xiang Ji, Jayna Raghwani, Benjamin C Jackson, Rachel Colquhoun, Áine O'Toole, Thomas P Peacock, Kate Twohig, Simon Thelwall, Gavin Dabrera, Richard Myers, null null, Nuno R Faria, Carmen Huber, Isaac I Bogoch, Kamran Khan, Louis du Plessis, Jeffrey C Barrett, David M Aanensen, Wendy S Barclay, Meera Chand, Thomas Richard Connor, Nicholas J Loman, Marc A Suchard, Oliver George Pybus, Andrew Rambaut, Moritz U G Kraemer
Context-specific emergence and growth of the SARS-CoV-2 Delta variant. Research square (2021)
John T McCrone, Robert J Woods, Emily T Martin, Ryan E Malosh, Arnold S Monto, Adam S Lauring
Stochastic processes constrain the within and between host evolution of influenza virus. eLife 7 (2018)