Louis du Plessis (L du Plessis)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 27

Top Topics

Single Molecule

Cross Sectional

Candida Albicans

Top Venues

Science (New York, N.Y.)

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Kerttu Majander, Marta Pla-Díaz, Louis du Plessis, Natasha Arora, Jose Filippini, Luis Pezo-Lanfranco, Sabine Eggers, Fernando Gonzáles-Candelas, Verena J Schuenemann
Redefining the treponemal history through pre-Columbian genomes from Brazil. Nature 627 (8002) (2024)
Kerttu Majander, Marta Pla-Díaz, Louis du Plessis, Natasha Arora, Jose Filippini, Luis Pezo-Lanfranco, Sabine Eggers, Fernando Gonzáles-Candelas, Verena J Schuenemann
Redefining the treponemal history through pre-Columbian genomes from Brazil. Nature 627 (8002) (2024)
Kerttu Majander, Marta Pla-Díaz, Louis du Plessis, Natasha Arora, Jose Filippini, Luis Pezo-Lanfranco, Sabine Eggers, Fernando Gonzáles-Candelas, Verena J Schuenemann
Redefining the treponemal history through pre-Columbian genomes from Brazil. Nature 627 (8002) (2024)
Kerttu Majander, Marta Pla-Díaz, Louis du Plessis, Natasha Arora, Jose Filippini, Luis Pezo-Lanfranco, Sabine Eggers, Fernando Gonzáles-Candelas, Verena J Schuenemann
Redefining the treponemal history through pre-Columbian genomes from Brazil. Nature (2024)
Kerttu Majander, Marta Pla-Díaz, Louis du Plessis, Natasha Arora, Jose Filippini, Luis Pezo-Lanfranco, Sabine Eggers, Fernando Gonzáles-Candelas, Verena J Schuenemann
Redefining the treponemal history through pre-Columbian genomes from Brazil. Nature 627 (8002) (2024)
Kerttu Majander, Marta Pla-Díaz, Louis du Plessis, Natasha Arora, Jose Filippini, Luis Pezo-Lanfranco, Sabine Eggers, Fernando Gonzáles-Candelas, Verena J Schuenemann
Redefining the treponemal history through pre-Columbian genomes from Brazil. Nature (2024)
Mark P Khurana, Jacob Curran-Sebastian, Neil Scheidwasser, Christian Morgenstern, Morten Rasmussen, Jannik Fonager, Marc Stegger, Man-Hung Eric Tang, Jonas L Juul, Leandro Andrés Escobar-Herrera, Frederik Trier Møller, null null, Mads Albertsen, Moritz U G Kraemer, Louis du Plessis, Jokelainen Pikka, Sune Lehmann, Tyra G Krause, Henrik Ullum, David A Duchêne, Laust Hvas Mortensen, Samir Bhatt
High-resolution epidemiological landscape from ~290,000 SARS-CoV-2 genomes from Denmark. Nature communications 15 (1) (2024)
Mark P Khurana, Jacob Curran-Sebastian, Neil Scheidwasser, Christian Morgenstern, Morten Rasmussen, Jannik Fonager, Marc Stegger, Man-Hung Eric Tang, Jonas L Juul, Leandro Andrés Escobar-Herrera, Frederik Trier Møller, null null, Mads Albertsen, Moritz U G Kraemer, Louis du Plessis, Jokelainen Pikka, Sune Lehmann, Tyra G Krause, Henrik Ullum, David A Duchêne, Laust Hvas Mortensen, Samir Bhatt
High-resolution epidemiological landscape from ~290,000 SARS-CoV-2 genomes from Denmark. Nature communications 15 (1) (2024)
Kerttu Majander, Marta Pla-Díaz, Louis du Plessis, Natasha Arora, Jose Filippini, Luis Pezo-Lanfranco, Sabine Eggers, Fernando Gonzáles-Candelas, Verena J Schuenemann
Redefining the treponemal history through pre-Columbian genomes from Brazil. Nature 627 (8002) (2024)
Kerttu Majander, Marta Pla-Díaz, Louis du Plessis, Natasha Arora, Jose Filippini, Luis Pezo-Lanfranco, Sabine Eggers, Fernando Gonzáles-Candelas, Verena J Schuenemann
Redefining the treponemal history through pre-Columbian genomes from Brazil. Nature (2024)
Kerttu Majander, Marta Pla-Díaz, Louis du Plessis, Natasha Arora, Jose Filippini, Luis Pezo-Lanfranco, Sabine Eggers, Fernando Gonzáles-Candelas, Verena J Schuenemann
Redefining the treponemal history through pre-Columbian genomes from Brazil. Nature 627 (8002) (2024)
Mark P Khurana, Jacob Curran-Sebastian, Neil Scheidwasser, Christian Morgenstern, Morten Rasmussen, Jannik Fonager, Marc Stegger, Man-Hung Eric Tang, Jonas L Juul, Leandro Andrés Escobar-Herrera, Frederik Trier Møller, null null, Mads Albertsen, Moritz U G Kraemer, Louis du Plessis, Jokelainen Pikka, Sune Lehmann, Tyra G Krause, Henrik Ullum, David A Duchêne, Laust Hvas Mortensen, Samir Bhatt
High-resolution epidemiological landscape from ~290,000 SARS-CoV-2 genomes from Denmark. Nature communications 15 (1) (2024)
Steven R Fiddaman, Evangelos A Dimopoulos, Ophelie Lebrasseur, Louis du Plessis, Bram Vrancken, Sophy Charlton, Ashleigh F Haruda, Kristina Tabbada, Patrik G Flammer, Stefan Dascalu, Nemanja Marković, Hannah M Li, Gabrielle Franklin, Robert Symmons, Henriette Baron, László Daróczi-Szabó, Dilyara N Shaymuratova, Igor V Askeyev, Olivier Putelat, Maria Saña, Hossein Davoudi, Homa Fathi, Amir Saed Mucheshi, Ali Akbar Vahdati, Liangren Zhang, Alison Foster, Naomi Sykes, Gabrielle Cass Baumberg, Jelena Bulatović, Arthur O Askeyev, Oleg V Askeyev, Marjan Mashkour, Oliver George Pybus, Venugopal Nair, Greger Larson, Adrian L Smith, Laurent Alain François Frantz
Ancient chicken remains reveal the origins of virulence in Marek's disease virus. Science (New York, N.Y.) 382 (6676) (2023)
Sarah A Nadeau, Timothy G Vaughan, Christiane Beckmann, Ivan Topolsky, Chaoran Chen, Emma B Hodcroft, Tobias Schär, Ina Nissen, Natascha Santacroce, Elodie Burcklen, Pedro F Ferreira, Kim Philipp Jablonski, Susana Posada Céspedes, Vincenzo Capece, Sophie Seidel, Noemi Santamaria de Souza, Julia Martínez Gómez, Phil Fang Cheng, Philipp Peter Bosshard, Mitchell Paul Levesque, Verena Kufner, Stefan Schmutz, Maryam Zaheri, Michael Huber, Alexandra Trkola, Samuel Cordey, Florian Laubscher, Ana Rita Gonçalves, Sébastien Aeby, Trestan Pillonel, Damien Jacot, Claire Bertelli, Gilbert Greub, Karoline Leuzinger, Madlen Stange, Alfredo Mari, Tim Roloff, Helena Seth-Smith, Hans H Hirsch, Adrian Egli, Maurice Redondo, Olivier Kobel, Christoph Noppen, Louis du Plessis, Niko Beerenwinkel, Richard A Neher, Christian Beisel, Tanja Stadler
Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data. Science translational medicine (2022)
Raquel Viana, Sikhulile Moyo, Daniel Gyamfi Amoako, Houriiyah Tegally, Cathrine Scheepers, Christian L Althaus, Ugochukwu J Anyaneji, Phillip A Bester, Maciej F Boni, Mohammed Chand, Wonderful T Choga, Rachel Colquhoun, Michaela Davids, Koen Deforche, Deelan Doolabh, Louis du Plessis, Susan Engelbrecht, Josie Everatt, Jennifer Giandhari, Marta Giovanetti, Diana Hardie, Verity Hill, Nei-Yuan Hsiao, Arash Iranzadeh, Arshad Ismail, Charity Joseph, Rageema Joseph, Legodile Koopile, Sergei L Kosakovsky Pond, Moritz U G Kraemer, Lesego Kuate-Lere, Oluwakemi Laguda-Akingba, Onalethatha Lesetedi-Mafoko, Richard J Lessells, Shahin Lockman, Alexander G Lucaci, Arisha Maharaj, Boitshoko Mahlangu, Tongai Maponga, Kamela Mahlakwane, Zinhle Makatini, Gert Marais, Dorcas Maruapula, Kereng Masupu, Mogomotsi Matshaba, Simnikiwe Mayaphi, Nokuzola Mbhele, Mpaphi B Mbulawa, Adriano Mendes, Koleka Mlisana, Anele Mnguni, Thabo Mohale, Monika Moir, Kgomotso Moruisi, Mosepele Mosepele, Gerald Motsatsi, Modisa S Motswaledi, Thongbotho Mphoyakgosi, Nokukhanya Msomi, Peter N Mwangi, Yeshnee Naidoo, Noxolo Ntuli, Martin Nyaga, Lucier Olubayo, Sureshnee Pillay, Botshelo Radibe, Yajna Ramphal, Upasana Ramphal, James E San, Lesley Scott, Roger Shapiro, Lavanya Singh, Pamela Smith-Lawrence, Wendy Stevens, Amy Strydom, Kathleen Subramoney, Naume Tebeila, Derek Tshiabuila, Joseph Tsui, Stephanie van Wyk, Steven Weaver, Constantinos K Wibmer, Eduan Wilkinson, Nicole Wolter, Alexander E Zarebski, Boitumelo Zuze, Dominique Goedhals, Wolfgang Preiser, Florette Treurnicht, Marietje Venter, Carolyn Williamson, Oliver George Pybus, Jinal N Bhiman, Allison Glass, Darren P Martin, Andrew Rambaut, Simani Gaseitsiwe, Anne von Gottberg, Tulio de Oliveira
Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa. Nature 603 (7902) (2022)
Dinesh Aggarwal, Ben Warne, Aminu S Jahun, William L Hamilton, Thomas Fieldman, Louis du Plessis, Verity Hill, Beth Blane, Emmeline Watkins, Elizabeth Wright, Grant Hall, Catherine Ludden, Richard Myers, Myra Hosmillo, Yasmin Chaudhry, Malte L Pinckert, Iliana Georgana, Rhys Izuagbe, Danielle Leek, Olisaeloka Nsonwu, Gareth J Hughes, Simon Packer, Andrew J Page, Marina Metaxaki, Stewart Fuller, Gillian Weale, Jon Holgate, Christopher A Brown, null null, null null, null null, Rob Howes, Duncan McFarlane, Gordon Dougan, Oliver George Pybus, Daniela De Angelis, Patrick H Maxwell, Sharon J Peacock, Michael P Weekes, Chris Illingworth, Ewan M Harrison, Nicholas J Matheson, Ian G Goodfellow
Genomic epidemiology of SARS-CoV-2 in a UK university identifies dynamics of transmission. Nature communications 13 (1) (2022)
John T McCrone, Verity Hill, Sumali Bajaj, Rosario Evans Pena, Ben C Lambert, Rhys P D Inward, Samir Bhatt, Erik M Volz, Christopher Ruis, Simon Dellicour, Guy Baele, Alexander E Zarebski, Adam Sadilek, Neo Wu, Aaron Schneider, Xiang Ji, Jayna Raghwani, Benjamin C Jackson, Rachel Colquhoun, Áine O'Toole, Thomas P Peacock, Kate Twohig, Simon Thelwall, Gavin Dabrera, Richard Myers, null null, Nuno Rodrigues Faria, Carmen Huber, Isaac I Bogoch, Kamran Khan, Louis du Plessis, Jeffrey C Barrett, David M Aanensen, Wendy S Barclay, Meera Chand, Thomas Richard Connor, Nicholas J Loman, Marc A Suchard, Oliver George Pybus, Andrew Rambaut, Moritz U G Kraemer
Context-specific emergence and growth of the SARS-CoV-2 Delta variant. Nature 610 (7930) (2022)
Alexander Eugene Zarebski, Louis du Plessis, Kris Varun Parag, Oliver George Pybus
A computationally tractable birth-death model that combines phylogenetic and epidemiological data. PLoS computational biology 18 (2) (2022)
Louis du Plessis, John T McCrone, Alexander Eugene Zarebski, Verity Hill, Christopher Ruis, Bernardo Gutierrez, Jayna Ragwani, Jordan Ashworth, Rachel Colquhoun, Thomas Richard Connor, Nuno Rodrigues Faria, Benjamin C Jackson, Nicholas James Loman, Áine Niamh O'Toole, Samuel M Nicholls, Kris Varun Parag, Emily Scher, Tetyana I Vasylyeva, Erik M Volz, Alexander G Watts, Isaac I Bogoch, Kamran Khan, null null, David M Aanensen, Moritz U G Kraemer, Andrew Rambaut, Oliver George Pybus
Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK. Science (New York, N.Y.) 371 (6530) (2021)
Moritz U G Kraemer, Verity Hill, Christopher Ruis, Simon Dellicour, Sumali Bajaj, John T McCrone, Guy Baele, Kris Varun Parag, Anya Lindström Battle, Bernardo Gutierrez, Benjamin C Jackson, Rachel Colquhoun, Áine Niamh O'Toole, Brennan Klein, Alessandro Vespignani, null null, Erik M Volz, Nuno Rodrigues Faria, David M Aanensen, Nicholas James Loman, Louis du Plessis, Simon Cauchemez, Andrew Rambaut, Samuel V Scarpino, Oliver George Pybus
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence. Science (New York, N.Y.) 373 (6557) (2021)
John T McCrone, Verity Hill, Sumali Bajaj, Rosario Evans Pena, Ben C Lambert, Rhys Inward, Samir Bhatt, Erik M Volz, Christopher Ruis, Simon Dellicour, Guy Baele, Alexander E Zarebski, Adam Sadilek, Neo Wu, Aaron Schneider, Xiang Ji, Jayna Raghwani, Benjamin C Jackson, Rachel Colquhoun, Áine O'Toole, Thomas P Peacock, Kate Twohig, Simon Thelwall, Gavin Dabrera, Richard Myers, null null, Nuno R Faria, Carmen Huber, Isaac I Bogoch, Kamran Khan, Louis du Plessis, Jeffrey C Barrett, David M Aanensen, Wendy S Barclay, Meera Chand, Thomas Richard Connor, Nicholas J Loman, Marc A Suchard, Oliver George Pybus, Andrew Rambaut, Moritz U G Kraemer
Context-specific emergence and growth of the SARS-CoV-2 Delta variant. Research square (2021)
Moritz U G Kraemer, Chia-Hung Yang, Bernardo Gutierrez, Chieh-Hsi Wu, Brennan Klein, David M Pigott, null null, Louis du Plessis, Nuno Rodrigues Faria, Ruoran Li, William P Hanage, John S Brownstein, Maylis Layan, Alessandro Vespignani, Huaiyu Tian, Christopher Dye, Oliver George Pybus, Samuel V Scarpino
The effect of human mobility and control measures on the COVID-19 epidemic in China. Science (New York, N.Y.) 368 (6490) (2020)
Darlan da Silva Candido, Ingra Morales Claro, Jaqueline Góes de Jesus, William Marciel de Souza, Filipe Romero Rebello Moreira, Simon Dellicour, Thomas A Mellan, Louis du Plessis, Rafael Henrique Moraes Pereira, Flávia Cristina Silva Sales, Erika Regina Manuli, Julien Thézé, Luiz Gonzaga Paula de Almeida, Mariane Talon de Menezes, Carolina Moreira Voloch, Marcilio Jorge Fumagalli, Thaís de Moura Coletti, Camila Alves Maia da Silva, Mariana Severo Ramundo, Mariene Ribeiro Amorim, Henrique H Hoeltgebaum, Swapnil Mishra, Mandev S Gill, Luiz Max Fagundes de Carvalho, Lewis Fletcher Buss, Carlos Augusto Prete Junior, Jordan Ashworth, Helder Takashi Imoto Nakaya, Pedro S Peixoto, Oliver J Brady, Samuel M Nicholls, Amilcar Tanuri, Atila Duque Rossi, Carlos K V Braga, Alexandra Lehmkuhl Gerber, Ana Paula de Campos Guimarães, Nelson Gaburo, Cecilia Salete Alencar, Alessandro C de S Ferreira, Cristiano X Lima, José Eduardo Levi, Celso Granato, Giulia M Ferreira, Ronaldo S Francisco, Fabiana Granja, Márcia Teixeira Garcia, Maria Luiza Moretti, Mauricio Wesley Perroud Junior, Terezinha Marta Pereira Pinto Castiñeiras, Carolina S Lazari, Sarah C Hill, Andreza Aruska de Souza Santos, Camila Lopes Simeoni, Julia Forato, Andrei Carvalho Sposito, Angélica Zaninelli Schreiber, Magnun N N Santos, Camila Zolini de Sá, Renan Pedra de Souza, Luciana C Resende-Moreira, Mauro Martins Texeira, Josy Hubner, Patrícia Falabella Leme, Rennan Garcias Moreira, Mauricio Lacerda Nogueira, null null, Neil M Ferguson, Sílvia Figueiredo Costa, José Luis Proença Modena, Ana Tereza Ribeiro de Vasconcelos, Samir Bhatt, Philippe Lemey, Chieh-Hsi Wu, Andrew Rambaut, Nicholas James Loman, Renato Santana de Aguiar, Oliver George Pybus, Ester Cerdeira Sabino, Nuno Rodrigues Faria
Evolution and epidemic spread of SARS-CoV-2 in Brazil. Science (New York, N.Y.) 369 (6508) (2020)
Xianding Deng, Wei Gu, Scot Federman, Louis du Plessis, Oliver George Pybus, Nuno Rodrigues Faria, Candace Wang, Guixia Yu, Brian Bushnell, Chao-Yang Pan, Hugo Guevara, Alicia Sotomayor Gonzalez, Kelsey C Zorn, Allan Gopez, Venice Servellita, Elaine Hsu, Steve Miller, Trevor Felix Bedford, Alexander L Greninger, Pavitra Roychoudhury, Joshua T Schiffer, Michael Famulare, Helen Y Chu, Jay Shendure, Keith R Jerome, Catie Anderson, Karthik Gangavarapu, Mark Zeller, Emily Spencer, Kristian G Andersen, Duncan R MacCannell, Clinton R Paden, Yan Li, Jing Zhang, Suxiang Tong, Gregory Armstrong, Scott Morrow, Matthew Willis, Bela T Matyas, Sundari Mase, Olivia Kasirye, Maggie Park, Godfred Masinde, Curtis Chan, Alexander Tin Han Yu, Shua J Chai, Elsa Villarino, Brandon Bonin, Debra A Wadford, Charles Y Chiu
Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California. Science (New York, N.Y.) 369 (6503) (2020)
Sarah C Hill, Renato de Souza, Julien Thézé, Ingra Claro, Renato S Aguiar, Leandro Abade, Fabiana C P Santos, Mariana Sequetin Cunha, Juliana S Nogueira, Flávia Cristina Silva Sales, Iray M Rocco, Adriana Yurika Maeda, Fernanda G S Vasami, Louis du Plessis, Paola P Silveira, Jaqueline G de Jesus, Joshua Quick, Natália Coelho Couto de Azevedo Fernandes, Juliana Mariotti Guerra, Rodrigo A Réssio, Marta Giovanetti, Luiz Carlos Junior Alcantara, Cinthya Dos Santos Cirqueira, Josué Díaz-Delgado, Fernando L L Macedo, Maria do Carmo S T Timenetsky, Regiane de Paula, Roberta Spinola, Juliana Telles de Deus, Luis Filipe Mucci, Rosa Maria Tubaki, Regiane M T de Menezes, Patrícia L Ramos, Andre L de Abreu, Laura N Cruz, Nick Loman, Simon Dellicour, Oliver G Pybus, Ester C Sabino, Nuno Rodrigues Faria
Genomic Surveillance of Yellow Fever Virus Epizootic in São Paulo, Brazil, 2016 - 2018. PLoS pathogens 16 (8) (2020)
Simon Dellicour, Sébastian Lequime, Bram Vrancken, Mandev S Gill, Paul Bastide, Karthik Gangavarapu, Nathaniel L Matteson, Yi Tan, Louis du Plessis, Alexander A Fisher, Martha I Nelson, Marius Gilbert, Marc A Suchard, Kristian G Andersen, Nathan D Grubaugh, Oliver George Pybus, Philippe Lemey
Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework. Nature communications 11 (1) (2020)
Nuno Rodrigues Faria, Moritz U G Kraemer, Sarah Catherine Hill, Jaqueline Góes de Jesus, Renato Santana de Aguiar, Felipe Campos de Melo Iani, Joilson Xavier, J Quick, Louis du Plessis, Simon Dellicour, J Thézé, R D O Carvalho, Guy Baele, C-H Wu, P P Silveira, M B Arruda, M A Pereira, G C Pereira, Paul S Wikramaratna, U Obolski, Leandro Abade, T I Vasylyeva, M Giovanetti, D Yi, Daniel J Weiss, G R William Wint, F M Shearer, Sebastian Funk, B Nikolay, Vagner Fonseca, Talita Émile Ribeiro Adelino, M A A Oliveira, M V F Silva, Lívia Sacchetto, P O Figueiredo, Izabela Maurício de Rezende, Érica Munhoz de Mello, R F C Said, D A Santos, Marcela Lencine Ferraz, M G Brito, L F Santana, Mariane Talon de Menezes, Rodrigo M Brindeiro, Amilcar Tanuri, F C P Dos Santos, M S Cunha, J S Nogueira, I M Rocco, Antonio Charlys da Costa, Shirley Vasconcelos Komninakis, Vasco Ariston de Carvalho Azevedo, A O Chieppe, E S M Araujo, M C L Mendonça, C C Dos Santos, C D Dos Santos, A M Mares-Guia, R M R Nogueira, Patricia C de Sequeira, Ricardo Gadelha de Abreu, Márcio Henrique de Oliveira Garcia, A L Abreu, O Okumoto, Erna Geessien Kroon, C F C de Albuquerque, K Lewandowski, S T Pullan, M Carroll, T de Oliveira, Ester Cerdeira Sabino, R P Souza, Marc A Suchard, Philippe Lemey, G S Trindade, B P Drumond, A M B Filippis, N J Loman, S Cauchemez, Luiz Carlos Junior Alcantara, Oliver George Pybus
Genomic and epidemiological monitoring of yellow fever virus transmission potential. Science (New York, N.Y.) 361 (6405) (2018)