Oliver George Pybus (Oliver G. Pybus, Oliver Pybus, Oliver G Pybus, O G Pybus)

Scopus Author ID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 60

Top Venues

Science (New York, N.Y.)

Virus evolution

Nature communications

Molecular biology and evolution

University of Oxford

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Oxford

United Kingdom

Professor of Evolution & Infectious Disease :: Department of Zoology

Publications

Brennan Klein, Harrison Hartle, Munik Shrestha, Ana Cecilia Zenteno, David Barros Sierra Cordera, José R Nicolás-Carlock, Ana I Bento, Benjamin M Althouse, Bernardo Gutierrez, Marina Escalera-Zamudio, Arturo Reyes-Sandoval, Oliver George Pybus, Alessandro Vespignani, Jose Alberto Diaz Quinonez, Samuel V Scarpino, Moritz U G Kraemer
Spatial scales of COVID-19 transmission in Mexico. PNAS nexus 3 (9) (2024)
Guogang Zhang, Bingying Li, Jayna Ragwani, Bram Vrancken, Ru Jia, Sarah C Hill, Guillaume Fournié, Yanchao Cheng, Qiqi Yang, Yuxin Wang, Zengmiao Wang, Lu Dong, Oliver George Pybus, Huaiyu Tian
Bidirectional Movement of Emerging H5N8 Avian Influenza Viruses Between Europe and Asia via Migratory Birds Since Early 2020. Molecular biology and evolution 40 (2) (2023)
Joseph L-H Tsui, John T McCrone, Ben C Lambert, Sumali Bajaj, Rhys P D Inward, Paolo Bosetti, Rosario Evans Pena, Houriiyah Tegally, Verity Hill, Alexander Eugene Zarebski, Thomas P Peacock, Luyang Liu, Neo Wu, Megan Davis, Issac I Bogoch, Kamran Khan, Meaghan Kall, Nurin Iwani Binti Abdul Aziz, Rachel Colquhoun, Áine Niamh O'Toole, Benjamin C Jackson, Abhishek Dasgupta, Eduan Wilkinson, Tulio de Oliveira, null null, Thomas Richard Connor, Nicholas James Loman, Vittoria Colizza, Christophe Fraser, Erik M Volz, Xiang Ji, Bernardo Gutierrez, Meera Chand, Simon Dellicour, Simon Cauchemez, Jayna Ragwani, Marc A Suchard, Philippe Lemey, Andrew Rambaut, Oliver George Pybus, Moritz U G Kraemer
Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1. Science (New York, N.Y.) 381 (6655) (2023)
Yiqiao Li, Mahan Ghafari, Andrew J Holbrook, I Boonen, Nabil M S Amor, Stefano Catalano, Joanne P Webster, Yao-Yao Li, Haotian Li, Valentijn Vergote, Piet Maes, Y L Chong, Anne Laudisoit, P Baelo, S Ngoy, S G Mbalitini, G C Gembu, P Musaba Akawa, J Goüy de Bellocq, Herwig Leirs, Erik Verheyen, Oliver George Pybus, Aris Katzourakis, Abdulaziz N Alagaili, Sophie Gryseels, Y C Li, Marc A Suchard, Magda Bletsa, Philippe Lemey
The evolutionary history of hepaciviruses. bioRxiv : the preprint server for biology (2023)
Marina Escalera-Zamudio, Sergei L Kosakovsky Pond, Natalia Martínez de la Viña, Bernardo Gutiérrez, Rhys P D Inward, Julien Thézé, Lucy van Dorp, Hugo G Castelán-Sánchez, Thomas A Bowden, Oliver George Pybus, Ruben J G Hulswit
Identification of evolutionary trajectories shared across human betacoronaviruses. Genome biology and evolution (2023)
Guogang Zhang, Bingying Li, Jayna Ragwani, Bram Vrancken, Ru Jia, Sarah C Hill, Guillaume Fournié, Yanchao Cheng, Qiqi Yang, Yuxin Wang, Zengmiao Wang, Lu Dong, Oliver George Pybus, Huaiyu Tian
Bidirectional movement of emerging H5N8 avian influenza viruses between Europe and Asia via migratory birds since early 2020. Molecular biology and evolution (2023)
Guogang Zhang, Bingying Li, Jayna Ragwani, Bram Vrancken, Ru Jia, Sarah C Hill, Guillaume Fournié, Yanchao Cheng, Qiqi Yang, Yuxin Wang, Zengmiao Wang, Lu Dong, Oliver George Pybus, Huaiyu Tian
Bidirectional Movement of Emerging H5N8 Avian Influenza Viruses Between Europe and Asia via Migratory Birds Since Early 2020. Molecular biology and evolution 40 (2) (2023)
Steven R Fiddaman, Evangelos A Dimopoulos, Ophelie Lebrasseur, Louis du Plessis, Bram Vrancken, Sophy Charlton, Ashleigh F Haruda, Kristina Tabbada, Patrik G Flammer, Stefan Dascalu, Nemanja Marković, Hannah M Li, Gabrielle Franklin, Robert Symmons, Henriette Baron, László Daróczi-Szabó, Dilyara N Shaymuratova, Igor V Askeyev, Olivier Putelat, Maria Saña, Hossein Davoudi, Homa Fathi, Amir Saed Mucheshi, Ali Akbar Vahdati, Liangren Zhang, Alison Foster, Naomi Sykes, Gabrielle Cass Baumberg, Jelena Bulatović, Arthur O Askeyev, Oleg V Askeyev, Marjan Mashkour, Oliver George Pybus, Venugopal Nair, Greger Larson, Adrian L Smith, Laurent Alain François Frantz
Ancient chicken remains reveal the origins of virulence in Marek's disease virus. Science (New York, N.Y.) 382 (6676) (2023)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Mahan Ghafari, Louis du Plessis, Jayna Ragwani, Samir Bhatt, Bo Xu, Oliver George Pybus, Aris Katzourakis
Purifying Selection Determines the Short-Term Time Dependency of Evolutionary Rates in SARS-CoV-2 and pH1N1 Influenza. Molecular biology and evolution 39 (2) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Huaiyu Tian, Naizhe Li, Yapin Li, Moritz U G Kraemer, Hua Tan, Yonghong Liu, Yidan Li, Ben Wang, Peiyi Wu, Bernard Cazelles, Paul S Wikramaratna, Dongqi Gao, Dingwei Sun, Wenjing Song, Yuchun Li, Oliver George Pybus, Guangze Wang, Christopher Dye
Erratum: Author Correction: Malaria elimination on Hainan Island despite climate change. Communications medicine 2 (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Raquel Viana, Sikhulile Moyo, Daniel Gyamfi Amoako, Houriiyah Tegally, Cathrine Scheepers, Christian L Althaus, Ugochukwu J Anyaneji, Phillip A Bester, Maciej F Boni, Mohammed Chand, Wonderful T Choga, Rachel Colquhoun, Michaela Davids, Koen Deforche, Deelan Doolabh, Louis du Plessis, Susan Engelbrecht, Josie Everatt, Jennifer Giandhari, Marta Giovanetti, Diana Hardie, Verity Hill, Nei-Yuan Hsiao, Arash Iranzadeh, Arshad Ismail, Charity Joseph, Rageema Joseph, Legodile Koopile, Sergei L Kosakovsky Pond, Moritz U G Kraemer, Lesego Kuate-Lere, Oluwakemi Laguda-Akingba, Onalethatha Lesetedi-Mafoko, Richard J Lessells, Shahin Lockman, Alexander G Lucaci, Arisha Maharaj, Boitshoko Mahlangu, Tongai Maponga, Kamela Mahlakwane, Zinhle Makatini, Gert Marais, Dorcas Maruapula, Kereng Masupu, Mogomotsi Matshaba, Simnikiwe Mayaphi, Nokuzola Mbhele, Mpaphi B Mbulawa, Adriano Mendes, Koleka Mlisana, Anele Mnguni, Thabo Mohale, Monika Moir, Kgomotso Moruisi, Mosepele Mosepele, Gerald Motsatsi, Modisa S Motswaledi, Thongbotho Mphoyakgosi, Nokukhanya Msomi, Peter N Mwangi, Yeshnee Naidoo, Noxolo Ntuli, Martin Nyaga, Lucier Olubayo, Sureshnee Pillay, Botshelo Radibe, Yajna Ramphal, Upasana Ramphal, James E San, Lesley Scott, Roger Shapiro, Lavanya Singh, Pamela Smith-Lawrence, Wendy Stevens, Amy Strydom, Kathleen Subramoney, Naume Tebeila, Derek Tshiabuila, Joseph Tsui, Stephanie van Wyk, Steven Weaver, Constantinos K Wibmer, Eduan Wilkinson, Nicole Wolter, Alexander E Zarebski, Boitumelo Zuze, Dominique Goedhals, Wolfgang Preiser, Florette Treurnicht, Marietje Venter, Carolyn Williamson, Oliver George Pybus, Jinal N Bhiman, Allison Glass, Darren P Martin, Andrew Rambaut, Simani Gaseitsiwe, Anne von Gottberg, Tulio de Oliveira
Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa. Nature 603 (7902) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Dinesh Aggarwal, Ben Warne, Aminu S Jahun, William L Hamilton, Thomas Fieldman, Louis du Plessis, Verity Hill, Beth Blane, Emmeline Watkins, Elizabeth Wright, Grant Hall, Catherine Ludden, Richard Myers, Myra Hosmillo, Yasmin Chaudhry, Malte L Pinckert, Iliana Georgana, Rhys Izuagbe, Danielle Leek, Olisaeloka Nsonwu, Gareth J Hughes, Simon Packer, Andrew J Page, Marina Metaxaki, Stewart Fuller, Gillian Weale, Jon Holgate, Christopher A Brown, null null, null null, null null, Rob Howes, Duncan McFarlane, Gordon Dougan, Oliver George Pybus, Daniela De Angelis, Patrick H Maxwell, Sharon J Peacock, Michael P Weekes, Chris Illingworth, Ewan M Harrison, Nicholas J Matheson, Ian G Goodfellow
Genomic epidemiology of SARS-CoV-2 in a UK university identifies dynamics of transmission. Nature communications 13 (1) (2022)
Anderson Fernandes Brito, Elizaveta Semenova, Gytis Dudas, Gabriel W Hassler, Chaney C Kalinich, Moritz U G Kraemer, Joses Wei Hao Ho, Houriiyah Tegally, George Githinji, Charles N Agoti, Lucy E Matkin, Charles Whittaker, null null, null null, null null, null null, null null, null null, null null, null null, Benjamin Peter Howden, Vitali Sintchenko, Neta S Zuckerman, Orna Mor, Heather M Blankenship, Tulio de Oliveira, Raymond Tzer Pin Lin, Marilda Mendonça Siqueira, Paola Cristina Resende Silva, Ana Tereza Ribeiro de Vasconcelos, Fernando Rosado Spilki, Renato Santana de Aguiar, Ivailo Alexiev, Ivan N Ivanov, Ivva Philipova, Christine V F Carrington, Nikita S D Sahadeo, Ben Branda, Céline Gurry, Sebastian Maurer-Stroh, Dhamari Naidoo, Karin J von Eije, Mark D Perkins, Maria D Van Kerkhove, Sarah C Hill, Ester C Sabino, Oliver George Pybus, Christopher Dye, Samir Bhatt, Seth R Flaxman, Marc A Suchard, Nathan D Grubaugh, Guy Baele, Nuno Rodrigues Faria
Global disparities in SARS-CoV-2 genomic surveillance. Nature communications 13 (1) (2022)
John T McCrone, Verity Hill, Sumali Bajaj, Rosario Evans Pena, Ben C Lambert, Rhys P D Inward, Samir Bhatt, Erik M Volz, Christopher Ruis, Simon Dellicour, Guy Baele, Alexander E Zarebski, Adam Sadilek, Neo Wu, Aaron Schneider, Xiang Ji, Jayna Raghwani, Benjamin C Jackson, Rachel Colquhoun, Áine O'Toole, Thomas P Peacock, Kate Twohig, Simon Thelwall, Gavin Dabrera, Richard Myers, null null, Nuno Rodrigues Faria, Carmen Huber, Isaac I Bogoch, Kamran Khan, Louis du Plessis, Jeffrey C Barrett, David M Aanensen, Wendy S Barclay, Meera Chand, Thomas Richard Connor, Nicholas J Loman, Marc A Suchard, Oliver George Pybus, Andrew Rambaut, Moritz U G Kraemer
Context-specific emergence and growth of the SARS-CoV-2 Delta variant. Nature 610 (7930) (2022)
Houriiyah Tegally, Monika Moir, Josie Everatt, Marta Giovanetti, Cathrine Scheepers, Eduan Wilkinson, Kathleen Subramoney, Zinhle Makatini, Sikhulile Moyo, Daniel Gyamfi Amoako, Cheryl Baxter, Christian L Althaus, Ugochukwu J Anyaneji, Dikeledi Kekana, Raquel Viana, Jennifer Giandhari, Richard J Lessells, Tongai Gibson Maponga, Dorcas Maruapula, Wonderful Choga, Mogomotsi Matshaba, Mpaphi B Mbulawa, Nokukhanya Msomi, null null, Yeshnee Naidoo, Sureshnee Pillay, Tomasz Janusz Sanko, James Emmanuel San, Lesley Scott, Lavanya Singh, Nonkululeko A Magini, Pamela Smith-Lawrence, Wendy Stevens, Graeme Dor, Derek Tshiabuila, Nicole Wolter, Wolfgang Preiser, Florette K Treurnicht, Marietjie Venter, Georginah Chiloane, Caitlyn McIntyre, Áine Niamh O'Toole, Christopher Ruis, Thomas P Peacock, Cornelius Römer, Sergei L Kosakovsky Pond, Carolyn Williamson, Oliver George Pybus, Jinal N Bhiman, Allison J Glass, Darren P Martin, Ben Jackson, Andrew Rambaut, Oluwakemi Laguda-Akingba, Simani Gaseitsiwe, Anne von Gottberg, Tulio de Oliveira
Emergence of SARS-CoV-2 Omicron lineages BA.4 and BA.5 in South Africa. Nature medicine 28 (9) (2022)
Huaiyu Tian, Naizhe Li, Yapin Li, Moritz U G Kraemer, Hua Tan, Yonghong Liu, Yidan Li, Ben Wang, Peiyi Wu, Bernard Cazelles, Paul S Wikramaratna, Dongqi Gao, Dingwei Sun, Wenjing Song, Yuchun Li, Oliver George Pybus, Guangze Wang, Christopher Dye
Malaria elimination on Hainan Island despite climate change. Communications medicine 2 (2022)
Kenneth B Hoehn, Oliver George Pybus, Steven H Kleinstein
Phylogenetic analysis of migration, differentiation, and class switching in B cells. PLoS computational biology 18 (4) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Yiqiao Li, Magda Bletsa, Zafeiro Zisi, Ine Boonen, Sophie Gryseels, Liana Kafetzopoulou, Joanne P Webster, Stefano Catalano, Oliver George Pybus, Frederik Van de Perre, Haotian Li, Yaoyao Li, Yuchun Li, Alexei Abramov, Petros Lymberakis, Philippe Lemey, Sébastian Lequime
Endogenous Viral Elements in Shrew Genomes Provide Insights into Pestivirus Ancient History. Molecular biology and evolution 39 (10) (2022)
Michelle Wille, Conny Tolf, Neus Latorre-Margalef, Ron A M Fouchier, Rebecca A Halpin, David E Wentworth, Jayna Ragwani, Oliver George Pybus, Björn Olsen, Jonas Waldenström
Evolutionary features of a prolific subtype of avian influenza A virus in European waterfowl. Virus evolution 8 (2) (2022)
Baisheng Li, Aiping Deng, Kuibiao Li, Yao Hu, Zhencui Li, Yaling Shi, Qianling Xiong, Zhe Liu, Qianfang Guo, Lirong Zou, Huan Zhang, Meng Zhang, Fangzhu Ouyang, Juan Su, Wenzhe Su, Jing Xu, Huifang Lin, Jing Sun, Jinju Peng, Huiming Jiang, Pingping Zhou, Ting Hu, Min Luo, Yingtao Zhang, Huanying Zheng, Jianpeng Xiao, Tao Liu, Mingkai Tan, Rongfei Che, Hanri Zeng, Zhonghua Zheng, Yushi Huang, Jianxiang Yu, Lina Yi, Jie Wu, Jingdiao Chen, Haojie Zhong, Xiaoling Deng, Min Kang, Oliver George Pybus, Matthew D Hall, Katrina A Lythgoe, Yan Li, Jun Yuan, Jianfeng He, Jing Lu
Viral infection and transmission in a large, well-traced outbreak caused by the SARS-CoV-2 Delta variant. Nature communications 13 (1) (2022)
Alexander Eugene Zarebski, Louis du Plessis, Kris Varun Parag, Oliver George Pybus
A computationally tractable birth-death model that combines phylogenetic and epidemiological data. PLoS computational biology 18 (2) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Stephen W Attwood, Sarah Catherine Hill, David M Aanensen, Thomas R Connor, Oliver George Pybus
Phylogenetic and phylodynamic approaches to understanding and combating the early SARS-CoV-2 pandemic. Nature reviews. Genetics 23 (9) (2022)
Chadi M Saad-Roy, Sinead E Morris, Charlotte Jessica E Metcalf, Michael Joseph Mina, Rachel E Baker, Jeremy J Farrar, Edward C Holmes, Oliver George Pybus, Andrea L Graham, Simon Asher Levin, Bryan T Grenfell, Caroline E Wagner
Epidemiological and evolutionary considerations of SARS-CoV-2 vaccine dosing regimes. Science (New York, N.Y.) 372 (6540) (2021)
Frank Konings, Mark D Perkins, Jens H Kuhn, Mark J Pallen, Erik J Alm, Brett N Archer, Amal Barakat, Trevor Bedford, Jinal N Bhiman, Leon Caly, Lisa L Carter, Anne Cullinane, Tulio de Oliveira, Julian Druce, Ihab El Masry, Roger Evans, George F Gao, Alexander E Gorbalenya, Esther Hamblion, Belinda L Herring, Emma Hodcroft, Edward C Holmes, Manish Kakkar, Shagun Khare, Marion P G Koopmans, Bette Korber, Juliana Leite, Duncan MacCannell, Marco Marklewitz, Sebastian Maurer-Stroh, Jairo Andres Mendez Rico, Vincent J Munster, Richard A Neher, Bas Oude Munnink, Boris I Pavlin, Joseph S Malik Peiris, Leo L M Poon, Oliver George Pybus, Andrew Rambaut, Paola Cristina Resende Silva, Lorenzo Subissi, Volker Thiel, Suxiang Tong, Sylvie van der Werf, Anne von Gottberg, John Ziebuhr, Maria D Van Kerkhove
SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse. Nature microbiology 6 (7) (2021)
Louis du Plessis, John T McCrone, Alexander Eugene Zarebski, Verity Hill, Christopher Ruis, Bernardo Gutierrez, Jayna Ragwani, Jordan Ashworth, Rachel Colquhoun, Thomas Richard Connor, Nuno Rodrigues Faria, Benjamin C Jackson, Nicholas James Loman, Áine Niamh O'Toole, Samuel M Nicholls, Kris Varun Parag, Emily Scher, Tetyana I Vasylyeva, Erik M Volz, Alexander G Watts, Isaac I Bogoch, Kamran Khan, null null, David M Aanensen, Moritz U G Kraemer, Andrew Rambaut, Oliver George Pybus
Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK. Science (New York, N.Y.) 371 (6530) (2021)
Nuno Rodrigues Faria, Thomas A Mellan, Charles Whittaker, Ingra Morales Claro, Darlan da Silva Candido, Swapnil Mishra, Myuki A E Crispim, Flávia Cristina Silva Sales, Iwona Hawryluk, John T McCrone, Ruben J G Hulswit, Lucas Augusto Moysés Franco, Mariana Severo Ramundo, Jaqueline Góes de Jesus, Pamela Dos Santos Andrade, Thaís de Moura Coletti, Giulia M Ferreira, Camila Alves Maia da Silva, Erika Regina Manuli, Rafael Henrique Moraes Pereira, Pedro S Peixoto, Moritz U G Kraemer, Nelson Gaburo-Júnior, Cecilia da C Camilo, Henrique H Hoeltgebaum, William Marciel de Souza, Esmenia C Rocha, Leandro Menezes de Souza, Mariana C de Pinho, Leonardo José Tadeu de Araújo, Frederico Scott Varella Malta, Aline Brito de Lima, Joice do Prado Silva, Danielle A G Zauli, Alessandro C de S Ferreira, Ricardo P Schnekenberg, Daniel J Laydon, Patrick G T Walker, Hannah M Schlüter, Ana L P Dos Santos, Maria S Vidal, Valentina S Del Caro, Rosinaldo M F Filho, Helem M Dos Santos, Renato Santana de Aguiar, José Luis Proença Modena, Bruce Walker Nelson, James A Hay, Mélodie Monod, Xenia Miscouridou, Helen Coupland, Raphael Sonabend, Michaela A C Vollmer, Axel Gandy, Carlos Augusto Prete Junior, Vítor Heloiz Nascimento, Marc A Suchard, Thomas A Bowden, Sergei L K Pond, Chieh-Hsi Wu, Oliver Ratmann, Neil M Ferguson, Christopher Dye, Nicholas James Loman, Philippe Lemey, Andrew Rambaut, Nelson A Fraiji, Maria do P S S Carvalho, Oliver George Pybus, Seth R Flaxman, Samir Bhatt, Ester Cerdeira Sabino
Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil. Science (New York, N.Y.) 372 (6544) (2021)
Moritz U G Kraemer, Verity Hill, Christopher Ruis, Simon Dellicour, Sumali Bajaj, John T McCrone, Guy Baele, Kris Varun Parag, Anya Lindström Battle, Bernardo Gutierrez, Benjamin C Jackson, Rachel Colquhoun, Áine Niamh O'Toole, Brennan Klein, Alessandro Vespignani, null null, Erik M Volz, Nuno Rodrigues Faria, David M Aanensen, Nicholas James Loman, Louis du Plessis, Simon Cauchemez, Andrew Rambaut, Samuel V Scarpino, Oliver George Pybus
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence. Science (New York, N.Y.) 373 (6557) (2021)
Marina Escalera-Zamudio, Sergei L Kosakovsky Pond, Natalia Martínez de la Viña, Bernardo Gutierrez, Julien Thézé, Thomas A Bowden, Oliver George Pybus, Ruben J G Hulswit
Identification of site-specific evolutionary trajectories shared across human betacoronaviruses. bioRxiv : the preprint server for biology (2021)
Tanja Stadler, Oliver George Pybus, Michael P H Stumpf
Phylodynamics for cell biologists. Science (New York, N.Y.) 371 (6526) (2021)
Áine Niamh O'Toole, Emily Scher, Anthony Underwood, Benjamin C Jackson, Verity Hill, John T McCrone, Rachel Colquhoun, Chris Ruis, Khalil Abu-Dahab, Ben Taylor, Corin Yeats, Louis du Plessis, Daniel Maloney, Nathan C Medd, Stephen W Attwood, David M Aanensen, Edward C Holmes, Oliver George Pybus, Andrew Rambaut
Assignment of epidemiological lineages in an emerging pandemic using the pangolin tool. Virus evolution 7 (2) (2021)
John T McCrone, Verity Hill, Sumali Bajaj, Rosario Evans Pena, Ben C Lambert, Rhys Inward, Samir Bhatt, Erik M Volz, Christopher Ruis, Simon Dellicour, Guy Baele, Alexander E Zarebski, Adam Sadilek, Neo Wu, Aaron Schneider, Xiang Ji, Jayna Raghwani, Benjamin C Jackson, Rachel Colquhoun, Áine O'Toole, Thomas P Peacock, Kate Twohig, Simon Thelwall, Gavin Dabrera, Richard Myers, null null, Nuno R Faria, Carmen Huber, Isaac I Bogoch, Kamran Khan, Louis du Plessis, Jeffrey C Barrett, David M Aanensen, Wendy S Barclay, Meera Chand, Thomas Richard Connor, Nicholas J Loman, Marc A Suchard, Oliver George Pybus, Andrew Rambaut, Moritz U G Kraemer
Context-specific emergence and growth of the SARS-CoV-2 Delta variant. Research square (2021)
Andrew Rambaut, Edward C Holmes, Áine Niamh O'Toole, Verity Hill, John T McCrone, Christopher Ruis, Louis du Plessis, Oliver George Pybus
Addendum: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology. Nature microbiology 6 (3) (2021)
Magda Bletsa, Bram Vrancken, Sophie Gryseels, Ine Boonen, Antonios Fikatas, Yiqiao Li, Anne Laudisoit, Sebastian Lequime, Josef Bryja, Rhodes Makundi, Yonas Meheretu, Benjamin Dudu Akaibe, Sylvestre Gambalemoke Mbalitini, Frederik Van de Perre, Natalie Van Houtte, Jana Těšíková, Elke Wollants, Marc Van Ranst, Oliver George Pybus, Jan Felix Drexler, Erik Verheyen, Herwig Leirs, Joelle Gouy de Bellocq, Philippe Lemey
Molecular detection and genomic characterization of diverse hepaciviruses in African rodents. Virus evolution 7 (1) (2021)
Bernardo Gutierrez, Sully Márquez, Belén Prado-Vivar, Mónica Becerra-Wong, Juan José Guadalupe, Darlan Da Silva Candido, Juan Carlos Fernandez-Cadena, Gabriel Morey-Leon, Rubén Armas-Gonzalez, Derly Madeleiny Andrade-Molina, Alfredo Bruno, Domenica De Mora, Maritza Olmedo, Denisse Portugal, Manuel Gonzalez, Alberto Orlando, Jan Felix Drexler, Andres Moreira-Soto, Anna-Lena Sander, Sebastian Brünink, Arne Kühne, Leandro Patiño, Andrés Carrazco-Montalvo, Orson Mestanza, Jeannete Zurita, Gabriela Sevillano, Louis Du Plessis, John T McCrone, Josefina Coloma, Gabriel Trueba, Verónica Barragán, Patricio Rojas-Silva, Michelle Grunauer, Moritz U G Kraemer, Nuno R Faria, Marina Escalera-Zamudio, Oliver George Pybus, Paúl Cárdenas
Genomic epidemiology of SARS-CoV-2 transmission lineages in Ecuador. Virus evolution 7 (2) (2021)
Caroline E Wagner, Chadi M Saad-Roy, Sinead E Morris, Rachel E Baker, Michael Joseph Mina, Jeremy J Farrar, Edward C Holmes, Oliver George Pybus, Andrea L Graham, Ezekiel J Emanuel, Simon Asher Levin, Charlotte Jessica E Metcalf, Bryan T Grenfell
Vaccine nationalism and the dynamics and control of SARS-CoV-2. Science (New York, N.Y.) 373 (6562) (2021)
Anderson Fernandes Brito, Elizaveta Semenova, Gytis Dudas, Gabriel W Hassler, Chaney C Kalinich, Moritz U G Kraemer, Sarah Catherine Hill, null null, Ester Cerdeira Sabino, Oliver George Pybus, Christopher Dye, Samir Bhatt, Seth R Flaxman, Marc A Suchard, Nathan D Grubaugh, Guy Baele, Nuno Rodrigues Faria
Global disparities in SARS-CoV-2 genomic surveillance. medRxiv : the preprint server for health sciences (2021)
Benjamin Rader, Samuel V Scarpino, Anjalika Nande, Alison L Hill, Ben Adlam, Robert C Reiner, David M Pigott, Bernardo Gutierrez, Alexander E Zarebski, Munik Shrestha, John S Brownstein, Marcia Caldas de Castro, Christopher Dye, Huaiyu Tian, Oliver George Pybus, Moritz U G Kraemer
Crowding and the shape of COVID-19 epidemics. Nature medicine 26 (12) (2020)
Huaiyu Tian, Yonghong Liu, Yidan Li, Chieh-Hsi Wu, Bin Chen, Moritz U G Kraemer, Bingying Li, Jun Cai, Bo Xu, Qiqi Yang, Ben Wang, Peng Yang, Yujun Cui, Yimeng Song, Pai Zheng, Quanyi Wang, Ottar N Bjornstad, Ruifu Yang, Bryan T Grenfell, Oliver George Pybus, Christopher Dye
An investigation of transmission control measures during the first 50 days of the COVID-19 epidemic in China. Science (New York, N.Y.) 368 (6491) (2020)
Moritz U G Kraemer, Chia-Hung Yang, Bernardo Gutierrez, Chieh-Hsi Wu, Brennan Klein, David M Pigott, null null, Louis du Plessis, Nuno Rodrigues Faria, Ruoran Li, William P Hanage, John S Brownstein, Maylis Layan, Alessandro Vespignani, Huaiyu Tian, Christopher Dye, Oliver George Pybus, Samuel V Scarpino
The effect of human mobility and control measures on the COVID-19 epidemic in China. Science (New York, N.Y.) 368 (6490) (2020)
Jaqueline Góes de Jesus, Claudio Sacchi, Darlan da Silva Candido, Ingra Morales Claro, Flávia Cristina Silva Sales, Erika Regina Manuli, Daniela Bernardes Borges da Silva, Terezinha Maria de Paiva, Margarete Aparecida Benega Pinho, Katia Correa de Oliveira Santos, Sarah Catherine Hill, Renato Santana Aguiar, Filipe Romero, Fabiana Cristina Pereira Dos Santos, Claudia Regina Gonçalves, Maria do Carmo S T Timenetsky, Joshua Quick, Julio Henrique Rosa Croda, Wanderson de Oliveira, Andrew Rambaut, Oliver George Pybus, Nicholas James Loman, Ester Cerdeira Sabino, Nuno Rodrigues Faria
Importation and early local transmission of COVID-19 in Brazil, 2020. Revista do Instituto de Medicina Tropical de Sao Paulo 62 (2020)
Darlan da Silva Candido, Ingra Morales Claro, Jaqueline Góes de Jesus, William Marciel de Souza, Filipe Romero Rebello Moreira, Simon Dellicour, Thomas A Mellan, Louis du Plessis, Rafael Henrique Moraes Pereira, Flávia Cristina Silva Sales, Erika Regina Manuli, Julien Thézé, Luiz Gonzaga Paula de Almeida, Mariane Talon de Menezes, Carolina Moreira Voloch, Marcilio Jorge Fumagalli, Thaís de Moura Coletti, Camila Alves Maia da Silva, Mariana Severo Ramundo, Mariene Ribeiro Amorim, Henrique H Hoeltgebaum, Swapnil Mishra, Mandev S Gill, Luiz Max Fagundes de Carvalho, Lewis Fletcher Buss, Carlos Augusto Prete Junior, Jordan Ashworth, Helder Takashi Imoto Nakaya, Pedro S Peixoto, Oliver J Brady, Samuel M Nicholls, Amilcar Tanuri, Atila Duque Rossi, Carlos K V Braga, Alexandra Lehmkuhl Gerber, Ana Paula de Campos Guimarães, Nelson Gaburo, Cecilia Salete Alencar, Alessandro C de S Ferreira, Cristiano X Lima, José Eduardo Levi, Celso Granato, Giulia M Ferreira, Ronaldo S Francisco, Fabiana Granja, Márcia Teixeira Garcia, Maria Luiza Moretti, Mauricio Wesley Perroud Junior, Terezinha Marta Pereira Pinto Castiñeiras, Carolina S Lazari, Sarah C Hill, Andreza Aruska de Souza Santos, Camila Lopes Simeoni, Julia Forato, Andrei Carvalho Sposito, Angélica Zaninelli Schreiber, Magnun N N Santos, Camila Zolini de Sá, Renan Pedra de Souza, Luciana C Resende-Moreira, Mauro Martins Texeira, Josy Hubner, Patrícia Falabella Leme, Rennan Garcias Moreira, Mauricio Lacerda Nogueira, null null, Neil M Ferguson, Sílvia Figueiredo Costa, José Luis Proença Modena, Ana Tereza Ribeiro de Vasconcelos, Samir Bhatt, Philippe Lemey, Chieh-Hsi Wu, Andrew Rambaut, Nicholas James Loman, Renato Santana de Aguiar, Oliver George Pybus, Ester Cerdeira Sabino, Nuno Rodrigues Faria
Evolution and epidemic spread of SARS-CoV-2 in Brazil. Science (New York, N.Y.) 369 (6508) (2020)
William Marciel de Souza, Lewis Fletcher Buss, Darlan da Silva Candido, Jean-Paul Carrera, Sabrina Li, Alexander Eugene Zarebski, Rafael Henrique Moraes Pereira, Carlos Augusto Prete Junior, Andreza Aruska de Souza-Santos, Kris Varun Parag, Maria Carolina T D Belotti, Maria F Vincenti-Gonzalez, Jane P Messina, Flávia Cristina Silva Sales, Pamela Dos Santos Andrade, Vítor Heloiz Nascimento, Fabio Ghilardi, Leandro Abade, Bernardo Gutierrez, Moritz U G Kraemer, Carlos K V Braga, Renato Santana Aguiar, Neal D E Alexander, Philippe Mayaud, Oliver J Brady, Izabel Oliva Marcílio de Souza, Nelson Gouveia, Guangdi Li, Adriana Tami, Silvano Barbosa de Oliveira, Victor Bertollo Gomes Porto, Fabiana Ganem, Walquiria Aparecida Ferreira de Almeida, Francieli Fontana Sutile Tardetti Fantinato, Eduardo Marques Macário, Wanderson Kleber de Oliveira, Mauricio Lacerda Nogueira, Oliver George Pybus, Chieh-Hsi Wu, Julio Henrique da Rosa Croda, Ester C Sabino, Nuno Rodrigues Faria
Epidemiological and clinical characteristics of the COVID-19 epidemic in Brazil. Nature human behaviour 4 (8) (2020)
Qiqi Yang, Xiang Zhao, Philippe Lemey, Marc A Suchard, Yuhai Bi, Weifeng Shi, Di Liu, Wenbao Qi, Guogang Zhang, Nils Chr Stenseth, Oliver George Pybus, Huaiyu Tian
Assessing the role of live poultry trade in community-structured transmission of avian influenza in China. Proceedings of the National Academy of Sciences of the United States of America 117 (11) (2020)
Xianding Deng, Wei Gu, Scot Federman, Louis du Plessis, Oliver George Pybus, Nuno Rodrigues Faria, Candace Wang, Guixia Yu, Brian Bushnell, Chao-Yang Pan, Hugo Guevara, Alicia Sotomayor Gonzalez, Kelsey C Zorn, Allan Gopez, Venice Servellita, Elaine Hsu, Steve Miller, Trevor Felix Bedford, Alexander L Greninger, Pavitra Roychoudhury, Joshua T Schiffer, Michael Famulare, Helen Y Chu, Jay Shendure, Keith R Jerome, Catie Anderson, Karthik Gangavarapu, Mark Zeller, Emily Spencer, Kristian G Andersen, Duncan R MacCannell, Clinton R Paden, Yan Li, Jing Zhang, Suxiang Tong, Gregory Armstrong, Scott Morrow, Matthew Willis, Bela T Matyas, Sundari Mase, Olivia Kasirye, Maggie Park, Godfred Masinde, Curtis Chan, Alexander Tin Han Yu, Shua J Chai, Elsa Villarino, Brandon Bonin, Debra A Wadford, Charles Y Chiu
Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California. Science (New York, N.Y.) 369 (6503) (2020)
Simon Dellicour, Sébastian Lequime, Bram Vrancken, Mandev S Gill, Paul Bastide, Karthik Gangavarapu, Nathaniel L Matteson, Yi Tan, Louis du Plessis, Alexander A Fisher, Martha I Nelson, Marius Gilbert, Marc A Suchard, Kristian G Andersen, Nathan D Grubaugh, Oliver George Pybus, Philippe Lemey
Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework. Nature communications 11 (1) (2020)
Marina Escalera-Zamudio, Michael Golden, Bernardo Gutierrez, Julien Thézé, Jeremy Russell Keown, Loic Carrique, Thomas A Bowden, Oliver George Pybus
Publisher Correction: Parallel evolution in the emergence of highly pathogenic avian influenza A viruses. Nature communications 11 (1) (2020)
Lewis Fletcher Buss, Carlos Augusto Prete Junior, Claudia M M Abrahim, Alfredo Mendrone, Tassila Salomon, Cesar de Almeida Neto, Rafael Freitas de Oliveira Franca, Maria Carolina T D Belotti, Maria do P S S Carvalho, Allyson Guimarães Costa, Myuki A E Crispim, Suzete Cleusa Ferreira, Nelson A Fraiji, Susie Gurzenda, Charles Whittaker, Leonardo T Kamaura, Pedro L Takecian, Pedro S Peixoto, Marcio K Oikawa, Anna Shoko Nishiya, Vanderson Geraldo Rocha, Nanci A Salles, Andreza Aruska de Souza-Santos, Martirene A da Silva, Brian S Custer, Kris Varun Parag, Manoel Barral Netto, Moritz U G Kraemer, Rafael Henrique Moraes Pereira, Oliver George Pybus, Michael P Busch, Marcia Caldas de Castro, Christopher Dye, Vítor Heloiz Nascimento, Nuno Rodrigues Faria, Ester Cerdeira Sabino
Three-quarters attack rate of SARS-CoV-2 in the Brazilian Amazon during a largely unmitigated epidemic. Science (New York, N.Y.) 371 (6526) (2020)
Marina Escalera-Zamudio, Michael Golden, Bernardo Gutierrez, Julien Thézé, Jeremy Russell Keown, Loic Carrique, Thomas A Bowden, Oliver George Pybus
Parallel evolution in the emergence of highly pathogenic avian influenza A viruses. Nature communications 11 (1) (2020)
Andrew Rambaut, Edward C Holmes, Áine Niamh O'Toole, Verity Hill, John T McCrone, Christopher Ruis, Louis du Plessis, Oliver George Pybus
A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology. Nature microbiology 5 (11) (2020)
Nuno Rodrigues Faria, Moritz U G Kraemer, Sarah Catherine Hill, Jaqueline Góes de Jesus, Renato Santana de Aguiar, Felipe Campos de Melo Iani, Joilson Xavier, J Quick, Louis du Plessis, Simon Dellicour, J Thézé, R D O Carvalho, Guy Baele, C-H Wu, P P Silveira, M B Arruda, M A Pereira, G C Pereira, Paul S Wikramaratna, U Obolski, Leandro Abade, T I Vasylyeva, M Giovanetti, D Yi, Daniel J Weiss, G R William Wint, F M Shearer, Sebastian Funk, B Nikolay, Vagner Fonseca, Talita Émile Ribeiro Adelino, M A A Oliveira, M V F Silva, Lívia Sacchetto, P O Figueiredo, Izabela Maurício de Rezende, Érica Munhoz de Mello, R F C Said, D A Santos, Marcela Lencine Ferraz, M G Brito, L F Santana, Mariane Talon de Menezes, Rodrigo M Brindeiro, Amilcar Tanuri, F C P Dos Santos, M S Cunha, J S Nogueira, I M Rocco, Antonio Charlys da Costa, Shirley Vasconcelos Komninakis, Vasco Ariston de Carvalho Azevedo, A O Chieppe, E S M Araujo, M C L Mendonça, C C Dos Santos, C D Dos Santos, A M Mares-Guia, R M R Nogueira, Patricia C de Sequeira, Ricardo Gadelha de Abreu, Márcio Henrique de Oliveira Garcia, A L Abreu, O Okumoto, Erna Geessien Kroon, C F C de Albuquerque, K Lewandowski, S T Pullan, M Carroll, T de Oliveira, Ester Cerdeira Sabino, R P Souza, Marc A Suchard, Philippe Lemey, G S Trindade, B P Drumond, A M B Filippis, N J Loman, S Cauchemez, Luiz Carlos Junior Alcantara, Oliver George Pybus
Genomic and epidemiological monitoring of yellow fever virus transmission potential. Science (New York, N.Y.) 361 (6405) (2018)
Patrik G Flammer, Simon Dellicour, Stephen G Preston, Dirk Rieger, Sylvia Warren, Cedric K W Tan, Rebecca Nicholson, Renáta Přichystalová, Niels Bleicher, Joachim Wahl, Nuno R Faria, Oliver George Pybus, Mark Pollard, Adrian L Smith
Molecular archaeoparasitology identifies cultural changes in the Medieval Hanseatic trading centre of Lübeck. Proceedings. Biological sciences 285 (1888) (2018)
Michelle Wille, Neus Latorre-Margalef, Conny Tolf, Rebecca Halpin, David Wentworth, Ron A M Fouchier, Jayna Raghwani, Oliver George Pybus, Björn Olsen, Jonas Waldenström
Where do all the subtypes go? Temporal dynamics of H8-H12 influenza A viruses in waterfowl. Virus evolution 4 (2) (2018)
Paul S Wikramaratna, José Lourenço, Paul Klenerman, Oliver George Pybus, Sunetra Gupta
Effects of neutralizing antibodies on escape from CD8+ T-cell responses in HIV-1 infection. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 370 (1675) (2016)

Oliver George Pybus.css-eqlu8i{font-size:small;padding-left:4px;} (Oliver G. Pybus, Oliver Pybus, Oliver G Pybus, O G Pybus)

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Oliver George Pybus (Oliver G. Pybus, Oliver Pybus, Oliver G Pybus, O G Pybus)