Thang V Pham

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 22

Top Topics

Mass Spectrometry

Acute Lymphoblastic Leukemia

Metastatic Renal Cell Carcinoma

Top Venues

Circulation. Genomic and precision medicine

International journal of molecular sciences

Bioinformatics (Oxford, England)

This page only lists publications with an associated author ORCID identifier.

Publications

Elena Navarro-Carrasco, Eva Monte-Serrano, Aurora Campos-Díaz, Frank Rolfs, Richard de Goeij-de Haas, Thang V Pham, Sander R Piersma, Paula González-Alonso, Connie R Jiménez, Pedro A Lazo
VRK1 Regulates Sensitivity to Oxidative Stress by Altering Histone Epigenetic Modifications and the Nuclear Phosphoproteome in Tumor Cells. International journal of molecular sciences 25 (9) (2024)
Karlijn B Rombouts, Tara A R van Merrienboer, Alex A Henneman, Jaco C Knol, Thang V Pham, Sander R Piersma, Connie R Jiménez, Natalija Bogunovic, Jolanda van der Velden, Kak Khee Yeung
Insight in the (Phospho)proteome of Vascular Smooth Muscle Cells Derived From Patients With Abdominal Aortic Aneurysm Reveals Novel Disease Mechanisms. Arteriosclerosis, thrombosis, and vascular biology (2024)
Edgar E Nollet, Maike Schuldt, Vasco Sequeira, Aleksandra Binek, Thang V Pham, Stephan A C Schoonvelde, Mark Jansen, Bauke V Schomakers, Michel van Weeghel, Frederic M Vaz, Riekelt H L Houtkooper, Jennifer E Van Eyk, Connie R Jiménez, Michelle Michels, Kenneth C Bedi, Kenneth B Margulies, Cristobal G Dos Remedios, Diederik W D Kuster, Jolanda van der Velden
Integrating Clinical Phenotype With Multiomics Analyses of Human Cardiac Tissue Unveils Divergent Metabolic Remodeling in Genotype-Positive and Genotype-Negative Patients With Hypertrophic Cardiomyopathy. Circulation. Genomic and precision medicine 17 (3) (2024)
Thang V Pham, Alex A Henneman, Nam X Truong, Connie R Jimenez
msproteomics sitereport: reporting DIA-MS phosphoproteomics experiments at site level with ease. Bioinformatics (Oxford, England) 40 (7) (2024)
Catarina Almeida-Marques, Frank Rolfs, Sander R Piersma, Irene V Bijnsdorp, Thang V Pham, Jaco C Knol, Connie R Jimenez
Secretome processing for proteomics: A methods comparison. Proteomics 24 (7) (2024)
Edgar E Nollet, Maike Schuldt, Vasco Sequeira, Aleksandra Binek, Thang V Pham, Stephan A C Schoonvelde, Mark Jansen, Bauke V Schomakers, Michel van Weeghel, Frederic M Vaz, Riekelt H L Houtkooper, Jennifer E Van Eyk, Connie R Jiménez, Michelle Michels, Kenneth C Bedi, Kenneth B Margulies, Cristobal G Dos Remedios, Diederik W D Kuster, Jolanda van der Velden
Integrating Clinical Phenotype With Multiomics Analyses of Human Cardiac Tissue Unveils Divergent Metabolic Remodeling in Genotype-Positive and Genotype-Negative Patients With Hypertrophic Cardiomyopathy. Circulation. Genomic and precision medicine 17 (3) (2024)
Catarina Almeida-Marques, Frank Rolfs, Sander R Piersma, Irene V Bijnsdorp, Thang V Pham, Jaco C Knol, Connie R Jimenez
Secretome processing for proteomics: A methods comparison. Proteomics 24 (7) (2024)
Edgar E Nollet, Maike Schuldt, Vasco Sequeira, Aleksandra Binek, Thang V Pham, Stephan A C Schoonvelde, Mark Jansen, Bauke V Schomakers, Michel van Weeghel, Frederic M Vaz, Riekelt H L Houtkooper, Jennifer E Van Eyk, Connie R Jiménez, Michelle Michels, Kenneth C Bedi, Kenneth B Margulies, Cristobal G Dos Remedios, Diederik W D Kuster, Jolanda van der Velden
Integrating Clinical Phenotype With Multiomics Analyses of Human Cardiac Tissue Unveils Divergent Metabolic Remodeling in Genotype-Positive and Genotype-Negative Patients With Hypertrophic Cardiomyopathy. Circulation. Genomic and precision medicine (2024)
Elena Navarro-Carrasco, Eva Monte-Serrano, Aurora Campos-Díaz, Frank Rolfs, Richard de Goeij-de Haas, Thang V Pham, Sander R Piersma, Paula González-Alonso, Connie R Jiménez, Pedro A Lazo
VRK1 Regulates Sensitivity to Oxidative Stress by Altering Histone Epigenetic Modifications and the Nuclear Phosphoproteome in Tumor Cells. International journal of molecular sciences 25 (9) (2024)
Thang V Pham, Alex A Henneman, Nam X Truong, Connie R Jimenez
msproteomics sitereport: reporting DIA-MS phosphoproteomics experiments at site level with ease. Bioinformatics (Oxford, England) 40 (7) (2024)
Catarina Almeida-Marques, Frank Rolfs, Sander R Piersma, Irene V Bijnsdorp, Thang V Pham, Jaco C Knol, Connie R Jimenez
Secretome processing for proteomics: A methods comparison. Proteomics 24 (7) (2024)
Edgar E Nollet, Maike Schuldt, Vasco Sequeira, Aleksandra Binek, Thang V Pham, Stephan A C Schoonvelde, Mark Jansen, Bauke V Schomakers, Michel van Weeghel, Frederic M Vaz, Riekelt H L Houtkooper, Jennifer E Van Eyk, Connie R Jiménez, Michelle Michels, Kenneth C Bedi, Kenneth B Margulies, Cristobal G Dos Remedios, Diederik W D Kuster, Jolanda van der Velden
Integrating Clinical Phenotype With Multiomics Analyses of Human Cardiac Tissue Unveils Divergent Metabolic Remodeling in Genotype-Positive and Genotype-Negative Patients With Hypertrophic Cardiomyopathy. Circulation. Genomic and precision medicine 17 (3) (2024)
Thang V Pham, Alex A Henneman, Nam X Truong, Connie R Jimenez
msproteomics sitereport: reporting DIA-MS phosphoproteomics experiments at site level with ease. Bioinformatics (Oxford, England) 40 (7) (2024)
Catarina Almeida-Marques, Frank Rolfs, Sander R Piersma, Irene V Bijnsdorp, Thang V Pham, Jaco C Knol, Connie R Jimenez
Secretome processing for proteomics: A methods comparison. Proteomics (2024)
Elena Navarro-Carrasco, Eva Monte-Serrano, Aurora Campos-Díaz, Frank Rolfs, Richard de Goeij-de Haas, Thang V Pham, Sander R Piersma, Paula González-Alonso, Connie R Jiménez, Pedro A Lazo
VRK1 Regulates Sensitivity to Oxidative Stress by Altering Histone Epigenetic Modifications and the Nuclear Phosphoproteome in Tumor Cells. International journal of molecular sciences 25 (9) (2024)
Thang V Pham, Vinh V Nguyen, Duong Vu, Alex A Henneman, Robin A Richardson, Sander R Piersma, Connie R Jimenez
A transformer architecture for retention time prediction in liquid chromatography mass spectrometry-based proteomics. Proteomics (2023)
Robin Beekhof, Andrea Bertotti, Franziska Böttger, Valentina Vurchio, Francesca Cottino, Eugenia R Zanella, Giorgia Migliardi, Marco Viviani, Elena Grassi, Barbara Lupo, Alexander A Henneman, Jaco C Knol, Thang V Pham, Richard de Goeij-de Haas, Sander R Piersma, Mariette Labots, Henk M W Verheul, Livio Trusolino, Connie R Jiménez
Phosphoproteomics of patient-derived xenographs identifies targets and markers associated with sensitivity and resistance to EGFR blockade in colorectal cancer. Science translational medicine 15 (709) (2023)
Myra E van Linde, Mariette Labots, Cyrillo G Brahm, Koos E Hovinga, Philip C De Witt Hamer, Richard J Honeywell, Richard de Goeij-de Haas, Alexander A Henneman, Jaco C Knol, Godefridus J Peters, Henk Dekker, Sander R Piersma, Thang V Pham, William Peter Vandertop, Connie R Jiménez, Henk M W Verheul
Tumor Drug Concentration and Phosphoproteomic Profiles After Two Weeks of Treatment With Sunitinib in Patients with Newly Diagnosed Glioblastoma. Clinical cancer research : an official journal of the American Association for Cancer Research 28 (8) (2022)
Valentina Cordoʹ, Mariska T Meijer, Rico Hagelaar, Richard R de Goeij-de Haas, Vera M Poort, Alex A Henneman, Sander R Piersma, Thang V Pham, Koichi Oshima, Adolfo A Ferrando, Guido J R Zaman, Connie R Jimenez, Jules P P Meijerink
Phosphoproteomic profiling of T cell acute lymphoblastic leukemia reveals targetable kinases and combination treatment strategies. Nature communications 13 (1) (2022)
Giulia Mantini, Laura L Meijer, Ilias Glogovitis, Sjors G J G In 't Veld, Rosita Paleckyte, Mjriam Capula, Tessa Y S Le Large, Luca Morelli, Thang V Pham, Sander R Piersma, Adam Enver Frampton, Connie R Jimenez, Geert Kazemier, Danijela Koppers-Lalic, Thomas Wurdinger, Elisa Giovannetti
Omics Analysis of Educated Platelets in Cancer and Benign Disease of the Pancreas. Cancers 13 (1) (2020)
Tessa Ya Sung Le Large, Btissame El Hassouni, Niccola Funel, Bart Kok, Sander R Piersma, Thang V Pham, Kenneth P Olive, Geert Kazemier, Hanneke W M van Laarhoven, Connie R Jimenez, Maarten F Bijlsma, Elisa Giovannetti
Proteomic analysis of gemcitabine-resistant pancreatic cancer cells reveals that microtubule-associated protein 2 upregulation associates with taxane treatment. Therapeutic advances in medical oncology 11 (2019)
Irene V Bijnsdorp, Olga Maxouri, Aarzo Kardar, Tim Schelfhorst, Sander R Piersma, Thang V Pham, Andre Vis, R Jeroen van Moorselaar, Connie R Jimenez
Feasibility of urinary extracellular vesicle proteome profiling using a robust and simple, clinically applicable isolation method. Journal of extracellular vesicles 6 (1) (2017)