Timothée Lionnet (Timothee Lionnet)

ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 20

Top Venues

bioRxiv : the preprint server for biology

Nature

Nature communications

Nature methods

NYU School of Medicine

Universite Pierre et Marie Curie (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

NYU School of Medicine Dec 20 2016

United States

Assistant Professor :: Institute for Systems Genetics and Department of Cell Biology

Education History

Universite Pierre et Marie Curie Sep 01 2002 - Oct 06 2016

France

PHD :: Physics Department, Ecole Normale Superieure

Publications

Sarah C Perlee, Yilun Ma, Miranda V Hunter, Jacob B Swanson, Zhitao Ming, Julia Xia, Timothée Lionnet, Maura McGrail, Richard M White
A zebrafish system for identifying genetic dependencies in melanocytes and melanoma. bioRxiv : the preprint server for biology (2024)
Gustavo S França, Maayan Baron, Benjamin R King, Jozef P Bossowski, Alicia Bjornberg, Maayan Pour, Anjali Rao, Ayushi S Patel, Selim Misirlioglu, Dalia Barkley, Kwan Ho Tang, Igor Dolgalev, Deborah A Liberman, Gal Avital, Felicia Kuperwaser, Marta Chiodin, Douglas A Levine, Thales Papagiannakopoulos, Andriy Marusyk, Timothée Lionnet, Itai Yanai
Cellular adaptation to cancer therapy along a resistance continuum. Nature 631 (8022) (2024)
Gustavo S França, Maayan Baron, Benjamin R King, Jozef P Bossowski, Alicia Bjornberg, Maayan Pour, Anjali Rao, Ayushi S Patel, Selim Misirlioglu, Dalia Barkley, Kwan Ho Tang, Igor Dolgalev, Deborah A Liberman, Gal Avital, Felicia Kuperwaser, Marta Chiodin, Douglas A Levine, Thales Papagiannakopoulos, Andriy Marusyk, Timothée Lionnet, Itai Yanai
Cellular adaptation to cancer therapy along a resistance continuum. Nature (2024)
Gustavo S França, Maayan Baron, Benjamin R King, Jozef P Bossowski, Alicia Bjornberg, Maayan Pour, Anjali Rao, Ayushi S Patel, Selim Misirlioglu, Dalia Barkley, Kwan Ho Tang, Igor Dolgalev, Deborah A Liberman, Gal Avital, Felicia Kuperwaser, Marta Chiodin, Douglas A Levine, Thales Papagiannakopoulos, Andriy Marusyk, Timothée Lionnet, Itai Yanai
Cellular adaptation to cancer therapy along a resistance continuum. Nature 631 (8022) (2024)
Sonali Narang, Yohana Ghebrechristos, Nikki A Evensen, Nina Murrell, Sylwia Jasinski, Talia H Ostrow, David Trent Teachey, Elizabeth A Raetz, Timothée Lionnet, Matthew T Witkowski, Iannis Aifantis, Aristotelis Tsirigos, William L Carroll
Clonal evolution of the 3D chromatin landscape in patients with relapsed pediatric B-cell acute lymphoblastic leukemia. Nature communications 15 (1) (2024)
Sonali Narang, Yohana Ghebrechristos, Nikki A Evensen, Nina Murrell, Sylwia Jasinski, Talia H Ostrow, David Trent Teachey, Elizabeth A Raetz, Timothée Lionnet, Matthew T Witkowski, Iannis Aifantis, Aristotelis Tsirigos, William L Carroll
Clonal evolution of the 3D chromatin landscape in patients with relapsed pediatric B-cell acute lymphoblastic leukemia. Nature communications 15 (1) (2024)
Gustavo S França, Maayan Baron, Benjamin R King, Jozef P Bossowski, Alicia Bjornberg, Maayan Pour, Anjali Rao, Ayushi S Patel, Selim Misirlioglu, Dalia Barkley, Kwan Ho Tang, Igor Dolgalev, Deborah A Liberman, Gal Avital, Felicia Kuperwaser, Marta Chiodin, Douglas A Levine, Thales Papagiannakopoulos, Andriy Marusyk, Timothée Lionnet, Itai Yanai
Cellular adaptation to cancer therapy along a resistance continuum. Nature (2024)
Sarah C Perlee, Yilun Ma, Miranda V Hunter, Jacob B Swanson, Zhitao Ming, Julia Xia, Timothée Lionnet, Maura McGrail, Richard M White
Identifying in vivo genetic dependencies of melanocyte and melanoma development. bioRxiv : the preprint server for biology (2024)
Sarah C Perlee, Yilun Ma, Miranda V Hunter, Jacob B Swanson, Zhitao Ming, Julia Xia, Timothée Lionnet, Maura McGrail, Richard M White
A zebrafish system for identifying genetic dependencies in melanocytes and melanoma. bioRxiv : the preprint server for biology (2024)
Sonali Narang, Yohana Ghebrechristos, Nikki A Evensen, Nina Murrell, Sylwia Jasinski, Talia H Ostrow, David Trent Teachey, Elizabeth A Raetz, Timothée Lionnet, Matthew T Witkowski, Iannis Aifantis, Aristotelis Tsirigos, William L Carroll
Clonal evolution of the 3D chromatin landscape in patients with relapsed pediatric B-cell acute lymphoblastic leukemia. Nature communications 15 (1) (2024)
Yi Fu, Finnegan Clark, Sofia Nomikou, Aristotelis Tsirigos, Timothée Lionnet
Connecting Chromatin Structures to Gene Regulation Using Dynamic Polymer Simulations. bioRxiv : the preprint server for biology (2023)
David M Ichikawa, Osama Abdin, Nader Alerasool, Manjunatha Kogenaru, April L Mueller, Han Wen, David O Giganti, Gregory W Goldberg, Samantha Adams, Jeffrey M Spencer, Rozita Razavi, Satra Nim, Hong Zheng, Courtney Gionco, Finnegan T Clark, Alexey Strokach, Timothy R Hughes, Timothée Lionnet, Mikko Taipale, Philip M Kim, Marcus B Noyes
A universal deep-learning model for zinc finger design enables transcription factor reprogramming. Nature biotechnology (2023)
Feiyue Lu, Brandon J Park, Rina Fujiwara, Jeremy E Wilusz, David S Gilmour, Ruth Lehmann, Timothée Lionnet
Integrator-mediated clustering of poised RNA polymerase II synchronizes histone transcription. bioRxiv : the preprint server for biology (2023)
Sudarshan Pinglay, Milica Bulajić, Dylan P Rahe, Emily Huang, Ran Brosh, Nicholas E Mamrak, Benjamin R King, Sergei German, John A Cadley, Lila Rieber, Nicole Easo, Timothée Lionnet, Shaun Mahony, Matthew T Maurano, Liam J Holt, Esteban Orlando Mazzoni, Jef D Boeke
Synthetic regulatory reconstitution reveals principles of mammalian Hox cluster regulation. Science (New York, N.Y.) 377 (6601) (2022)
Ella Bahry, Laura Breimann, Marwan Zouinkhi, Leo Epstein, Klim Kolyvanov, Nicholas Mamrak, Benjamin King, Xi Long, Kyle I S Harrington, Timothée Lionnet, Stephan Preibisch
RS-FISH: precise, interactive, fast, and scalable FISH spot detection. Nature methods 19 (12) (2022)
Feiyue Lu, Timothée Lionnet
Transcription Factor Dynamics. Cold Spring Harbor perspectives in biology 13 (11) (2021)
Hui-Lan Hu, Kalanghad Puthankalam Srinivas, Shuoshuo Wang, Moses V Chao, Timothée Lionnet, Ian Mohr, Angus C Wilson, Daniel P Depledge, Tony T Huang
Single-cell transcriptomics identifies Gadd45b as a regulator of herpesvirus-reactivating neurons. EMBO reports (2021)
Yuko Sato, Lennart Hilbert, Haruka Oda, Yinan Wan, John M Heddleston, Teng-Leong Chew, Vasily Zaburdaev, Philipp J Keller, Timothée Lionnet, Nadine L Vastenhouw, Hitoshi Kurumizaka
Histone H3K27 acetylation precedes active transcription during zebrafish zygotic genome activation as revealed by live-cell analysis. Development (Cambridge, England) 146 (19) (2019)
Xi Long, Jennifer Colonell, Allan M Wong, Robert H Singer, Timothée Lionnet
Quantitative mRNA imaging throughout the entire Drosophila brain. Nature methods 14 (7) (2017)
Tatjana Trcek, Timothée Lionnet, Hari Shroff, Ruth Lehmann
mRNA quantification using single-molecule FISH in Drosophila embryos. Nature protocols 12 (7) (2016)

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Publication Activity (10 Years)

Top Topics

Top Venues

Timothée Lionnet (Timothee Lionnet)