Tommaso Fontana

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 11

Top Topics

Convolutional Neural Network

Respiratory Syndrome Coronavirus

Palliative Care

Top Venues

Nature computational science

medRxiv : the preprint server for health sciences

Bioinformatics advances

Nucleic acids research

This page only lists publications with an associated author ORCID identifier.

Publications

Luca Cappelletti, Lauren Rekerle, Tommaso Fontana, Peter Hansen, Elena Casiraghi, Vida Ravanmehr, Christopher John Mungall, Jeremy J Yang, Leonard Spranger, Guy Karlebach, J Harry Caufield, Leigh C Carmody, Ben Coleman, Tudor I Oprea, Justin T Reese, Giorgio Valentini, Peter Nick Robinson
Node-degree aware edge sampling mitigates inflated classification performance in biomedical random walk-based graph representation learning. Bioinformatics advances 4 (1) (2024)
Luca Cappelletti, Lauren Rekerle, Tommaso Fontana, Peter Hansen, Elena Casiraghi, Vida Ravanmehr, Christopher John Mungall, Jeremy J Yang, Leonard Spranger, Guy Karlebach, J Harry Caufield, Leigh C Carmody, Ben Coleman, Tudor I Oprea, Justin T Reese, Giorgio Valentini, Peter Nick Robinson
Node-degree aware edge sampling mitigates inflated classification performance in biomedical random walk-based graph representation learning. Bioinformatics advances 4 (1) (2024)
Luca Cappelletti, Tommaso Fontana, Elena Casiraghi, Vida Ravanmehr, Tiffany J Callahan, Carlos Cano, Marcin P Joachimiak, Christopher J Mungall, Peter Nick Robinson, Justin Reese, Giorgio Valentini
GRAPE for fast and scalable graph processing and random-walk-based embedding. Nature computational science 3 (6) (2023)
Luca Cappelletti, Tommaso Fontana, Elena Casiraghi, Vida Ravanmehr, Tiffany J Callahan, Carlos Cano, Marcin P Joachimiak, Christopher J Mungall, Peter Nick Robinson, Justin Reese, Giorgio Valentini
GRAPE for fast and scalable graph processing and random-walk-based embedding. Nature computational science 3 (6) (2023)
Timothy Putman, Kevin Schaper, Nicolas A Matentzoglu, Vincent P Rubinetti, Faisal S Alquaddoomi, Corey Cox, J Harry Caufield, Glass Elsarboukh, Sarah Gehrke, Harshad Hegde, Justin T Reese, Ian Braun, Richard M Bruskiewich, Luca Cappelletti, Seth J Carbon, Anita R Caron, Lauren E Chan, Christopher G Chute, Katherina G Cortes, Vinícius De Souza, Tommaso Fontana, Nomi L Harris, Emily L Hartley, Eric Hurwitz, Julius O B Jacobsen, Madan Krishnamurthy, Bryan J Laraway, James Alastair McLaughlin, Julie A McMurry, Sierra A T Moxon, Kathleen R Mullen, Shawn T O'Neil, Kent A Shefchek, Ray Stefancsik, Sabrina Toro, Nicole A Vasilevsky, Ramona L Walls, Patricia L Whetzel, David Osumi-Sutherland, Damian Smedley, Peter Nick Robinson, Christopher John Mungall, Melissa A Haendel, Monica C Munoz-Torres
The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species. Nucleic acids research (2023)
Luca Cappelletti, Tommaso Fontana, Elena Casiraghi, Vida Ravanmehr, Tiffany J Callahan, Carlos Cano, Marcin P Joachimiak, Christopher J Mungall, Peter Nick Robinson, Justin Reese, Giorgio Valentini
GRAPE for fast and scalable graph processing and random-walk-based embedding. Nature computational science 3 (6) (2023)
Luca Cappelletti, Tommaso Fontana, Elena Casiraghi, Vida Ravanmehr, Tiffany J Callahan, Carlos Cano, Marcin P Joachimiak, Christopher J Mungall, Peter Nick Robinson, Justin Reese, Giorgio Valentini
GRAPE for fast and scalable graph processing and random-walk-based embedding. Nature computational science 3 (6) (2023)
Luca Cappelletti, Tommaso Fontana, Elena Casiraghi, Vida Ravanmehr, Tiffany J Callahan, Carlos Cano, Marcin P Joachimiak, Christopher J Mungall, Peter Nick Robinson, Justin Reese, Giorgio Valentini
GRAPE for fast and scalable graph processing and random-walk-based embedding. Nature computational science 3 (6) (2023)
Luca Cappelletti, Tommaso Fontana, Elena Casiraghi, Vida Ravanmehr, Tiffany J Callahan, Carlos Cano, Marcin P Joachimiak, Christopher J Mungall, Peter Nick Robinson, Justin Reese, Giorgio Valentini
GRAPE for fast and scalable graph processing and random-walk-based embedding. Nature computational science 3 (6) (2023)
Justin T Reese, Hannah Blau, Timothy Bergquist, Johanna J Loomba, Tiffany J Callahan, Bryan Laraway, Corneliu Antonescu, Elena Casiraghi, Ben Coleman, Michael Gargano, Kenneth Wilkins, Luca Cappelletti, Tommaso Fontana, Nariman Ammar, Blessy Antony, T M Murali, Guy Karlebach, Julie A McMurry, Andrew Williams, Richard Moffitt, Jineta Banerjee, Anthony E Solomonides, Hannah Davis, Kristin Kostka, Giorgio Valentini, David Sahner, Christopher G Chute, Charisse Madlock-Brown, Melissa A Haendel, Peter Nick Robinson, null null
Generalizable Long COVID Subtypes: Findings from the NIH N3C and RECOVER Programs. medRxiv : the preprint server for health sciences (2022)
Justin T Reese, Ben Coleman, Lauren E Chan, Hannah Blau, Tiffany J Callahan, Luca Cappelletti, Tommaso Fontana, Katie Rebecca Bradwell, Nomi L Harris, Elena Casiraghi, Giorgio Valentini, Guy Karlebach, Rachel R Deer, Julie A McMurry, Melissa A Haendel, Christopher G Chute, Emily Rose Pfaff, Richard A Moffitt, Heidi M Spratt, Jasvinder A Singh, Christopher John Mungall, Andrew E Williams, Peter Nick Robinson
Cyclooxygenase inhibitor use is associated with increased COVID-19 severity. medRxiv : the preprint server for health sciences (2021)