Tunca Doğan (T Doğan)

ResearcherID Loop profile Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 15

Top Venues

Protein science : a publication of the Protein Society

Briefings in bioinformatics

Bioinformatics (Oxford, England)

BMC bioinformatics

Hacettepe Üniversitesi

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Hacettepe Üniversitesi May 20 2019

Turkey

Assistant Professor :: Institute of Informatics

European Bioinformatics Institute Nov 15 2017 - May 15 2019

United Kingdom

Researcher :: Protein Function Development

Orta Doğu Teknik Üniversitesi Nov 15 2015 - Nov 15 2017

Turkey

Adjunct Faculty Member :: Graduate School of Informatics

University of Cambridge Nov 15 2013 - Nov 15 2015

United Kingdom

Post-doctoral member :: Clare Hall College

European Bioinformatics Institute Feb 15 2013 - Nov 15 2015

United Kingdom

Post-doctoral fellow :: UniProt Database Team

Izmir Yüksek Teknoloji Enstitüsü

Turkey

Research & teaching assistant :: Electrical & Electronics Engineering

Orta Doğu Teknik Üniversitesi

Turkey

Research & teaching assistant :: Faculty of Engineering

Publications

Erva Ulusoy, Tunca Doğan
Mutual annotation-based prediction of protein domain functions with Domain2GO. Protein science : a publication of the Protein Society 33 (6) (2024)
Erva Ulusoy, Tunca Doğan
Mutual annotation-based prediction of protein domain functions with Domain2GO. Protein science : a publication of the Protein Society 33 (6) (2024)
Erva Ulusoy, Tunca Doğan
Mutual annotation-based prediction of protein domain functions with Domain2GO. Protein science : a publication of the Protein Society 33 (6) (2024)
A Samet Özdilek, Ahmet Atakan, Gökhan Özsarı, Aybar Acar, M Volkan Atalay, Tunca Doğan, Ahmet S Rifaioğlu
ProFAB-open protein functional annotation benchmark. Briefings in bioinformatics 24 (2) (2023)
Sebastian Lobentanzer, Patrick Aloy, Jan Baumbach, Balazs Bohar, Vincent J Carey, Pornpimol Charoentong, Katharina Danhauser, Tunca Doğan, Johann Dreo, Ian Dunham, Elias Farr, Adrià Fernandez-Torras, Benjamin M Gyori, Michael Hartung, Charles Tapley Hoyt, Christoph Klein, Tamas Korcsmaros, Andreas Maier, Matthias Mann, David Ochoa, Elena Pareja-Lorente, Ferdinand Popp, Martin Preusse, Niklas Probul, Benno Schwikowski, Bünyamin Sen, Maximillian T Strauss, Denes Turei, Erva Ulusoy, Dagmar Waltemath, Judith A H Wodke, Julio Saez-Rodriguez
Democratizing knowledge representation with BioCypher. Nature biotechnology (2023)
A Samet Özdilek, Ahmet Atakan, Gökhan Özsarı, Aybar Acar, M Volkan Atalay, Tunca Doğan, Ahmet S Rifaioğlu
ProFAB-open protein functional annotation benchmark. Briefings in bioinformatics (2023)
Fulya Ciray, Tunca Doğan
Machine learning-based prediction of drug approvals using molecular, physicochemical, clinical trial and patent related features. Expert opinion on drug discovery (2022)
Gökhan Özsarı, Ahmet Sureyya Rifaioglu, Ahmet Atakan, Tunca Doğan, Maria Jesus Martin, Rengul Cetin Atalay, Mehmet Volkan Atalay
SLPred: a multi-view subcellular localization prediction tool for multi-location human proteins. Bioinformatics (Oxford, England) 38 (17) (2022)
Rengul Cetin-Atalay, Deniz Cansen Kahraman, Esra Nalbat, Ahmet Sureyya Rifaioglu, Ahmet Atakan, Ataberk Donmez, Heval Atas, M Volkan Atalay, Aybar C Acar, Tunca Doğan
Data Centric Molecular Analysis and Evaluation of Hepatocellular Carcinoma Therapeutics Using Machine Intelligence-Based Tools. Journal of gastrointestinal cancer 52 (4) (2021)
Tunca Doğan, Ece Akhan Güzelcan, Marcus Baumann, Altay Koyas, Heval Atas, Ian R Baxendale, Maria Jesus Martin, Rengul Cetin Atalay
Protein domain-based prediction of drug/compound-target interactions and experimental validation on LIM kinases. PLoS computational biology 17 (11) (2021)
Tunca Doğan, Heval Atas, Vishal Joshi, Ahmet Atakan, Ahmet Sureyya Rifaioglu, Esra Nalbat, Andrew Nightingale, Rabie Saidi, Vladimir Volynkin, Hermann Zellner, Rengul Cetin-Atalay, Maria Martin, Volkan Atalay
CROssBAR: comprehensive resource of biomedical relations with knowledge graph representations. Nucleic acids research 49 (16) (2021)
A S Rifaioglu, Rengul Cetin Atalay, D Cansen Kahraman, Tunca Doğan, Maria Jesus Martin, V Atalay
MDeePred: novel multi-channel protein featurization for deep learning-based binding affinity prediction in drug discovery. Bioinformatics (Oxford, England) 37 (5) (2021)
Ahmet Sureyya Rifaioglu, Esra Nalbat, Mehmet Volkan Atalay, Maria Jesus Martin, Rengul Cetin Atalay, Tunca Doğan
DEEPScreen: high performance drug-target interaction prediction with convolutional neural networks using 2-D structural compound representations. Chemical science 11 (9) (2020)
Alperen Dalkiran, Ahmet Sureyya Rifaioglu, Maria Jesus Martin, Rengul Cetin-Atalay, Volkan Atalay, Tunca Doğan
ECPred: a tool for the prediction of the enzymatic functions of protein sequences based on the EC nomenclature. BMC bioinformatics 19 (1) (2018)
Ahmet Sureyya Rifaioglu, Tunca Doğan, Ömer Sinan Saraç, Tulin Ersahin, Rabie Saidi, Mehmet Volkan Atalay, Maria Jesus Martin, Rengul Cetin-Atalay
Large-scale automated function prediction of protein sequences and an experimental case study validation on PTEN transcript variants. Proteins 86 (2) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Tunca Doğan (T Doğan)