Ziyi Li

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 25

Top Topics

Chronic Lymphocytic Leukemia

Long Noncoding Rna

Machine Learning

Radical Prostatectomy

Top Venues

Statistics in medicine

Bioinformatics (Oxford, England)

Clinical cancer research : an official journal of the American Association for Cancer Research

Bioinformatics advances

This page only lists publications with an associated author ORCID identifier.

Publications

Yue Lyu, Chong Wu, Wei Sun, Ziyi Li
Regional analysis to delineate intrasample heterogeneity with RegionalST. Bioinformatics (Oxford, England) 40 (4) (2024)
Alexandre Bazinet, Sai Prasad Desikan, Ziyi Li, Juan José Rodríguez Sevilla, Sangeetha Venugopal, Samuel Urrutia Argueta, Guillermo Montalban Bravo, Koiji Sasaki, Kelly Sharon Chien, Danielle Hammond, Rashmi Kanagal-Shamana, Irene Gañán-Gómez, Tapan Mahendra Kadia, Gautam Borthakur, Courtney D D DiNardo, Naval G Daver, Elias J Jabbour, Farhad Ravandi, Hagop M Kantarjian, Guillermo Garcia Manero
Cytogenetic and Molecular Associations with Outcomes in Higher-Risk Myelodysplastic Syndromes Treated with Hypomethylating Agents plus Venetoclax. Clinical cancer research : an official journal of the American Association for Cancer Research 30 (7) (2024)
Alexandre Bazinet, Sai Prasad Desikan, Ziyi Li, Juan José Rodríguez Sevilla, Sangeetha Venugopal, Samuel Urrutia Argueta, Guillermo Montalban Bravo, Koiji Sasaki, Kelly Sharon Chien, Danielle Hammond, Rashmi Kanagal-Shamana, Irene Gañán-Gómez, Tapan Mahendra Kadia, Gautam Borthakur, Courtney D D DiNardo, Naval G Daver, Elias J Jabbour, Farhad Ravandi, Hagop M Kantarjian, Guillermo Garcia Manero
Cytogenetic and molecular associations with outcomes in HR-MDS treated with hypomethylating agents plus venetoclax. Clinical cancer research : an official journal of the American Association for Cancer Research (2024)
Yue Lyu, Chong Wu, Wei Sun, Ziyi Li
Regional analysis to delineate intrasample heterogeneity with RegionalST. Bioinformatics (Oxford, England) 40 (4) (2024)
Yue Lyu, Chong Wu, Wei Sun, Ziyi Li
Regional analysis to delineate intrasample heterogeneity with RegionalST. Bioinformatics (Oxford, England) 40 (4) (2024)
Lan Shui, Anirban Maitra, Ying Yuan, Ken S Lau, Harsimran Kaur, Liang Li, Ziyi Li, null null
PoweREST: Statistical Power Estimation for Spatial Transcriptomics Experiments to Detect Differentially Expressed Genes Between Two Conditions. bioRxiv : the preprint server for biology (2024)
Ziyi Li, Yijian Huang, Dattatraya Patil, Mark Rubin, Martin G Sanda
Covariate-specific evaluation of continuous biomarker. Statistics in medicine (2023)
Sunyi Chi, Christopher R Flowers, Ziyi Li, Xuelin Huang, Peng Wei
MASH: Mediation Analysis of Survival Outcome and High-dimensional Omics Mediators with Application to Complex Diseases. bioRxiv : the preprint server for biology (2023)
Ziyi Li, Yijian Huang, Dattatraya Patil, Mark Rubin, Martin G Sanda
Covariate-specific evaluation of continuous biomarker. Statistics in medicine (2023)
Ziyi Li, Yijian Huang, Dattatraya Patil, Mark Rubin, Martin G Sanda
Covariate-specific evaluation of continuous biomarker. Statistics in medicine 42 (7) (2023)
Ashley Elimar Aaroe, Razelle Kurzrock, Gaurav Goyal, Aaron Michael Goodman, Harsh Patel, Gordon J Ruan, Gary A Ulaner, Jason R Young, Ziyi Li, Derek Dustin, Ronald S Go, Eli L Diamond, Filip Janku
Successful Treatment of Non-Langerhans Cell Histiocytosis with the MEK Inhibitor Trametinib: A Multicenter Analysis. Blood advances (2023)
Andrew O Suen, Fengqian Chen, Sheng Wang, Ziyi Li, Jing Zhu, Yang Yang, Olivia Conn, Kerri Lopez, Ping Cui, Laurence Wechsler, Alan S Cross, Gary Fiskum, Rosemary Ann Kozar, Peter Hu, Catriona Miller, Lin Zou, Brittney Williams, Wei Chao
Extracellular RNA Sensing Mediates Inflammation and Organ Injury in a Murine Model of Polytrauma. Journal of immunology (Baltimore, Md. : 1950) (2023)
Ruoxing Li, Jianjun Zhang, Ziyi Li
EasyCellType: marker-based cell-type annotation by automatically querying multiple databases. Bioinformatics advances 3 (1) (2023)
Ziyi Li, Yijian Huang, Dattatraya Patil, Mark Rubin, Martin G Sanda
Covariate-specific evaluation of continuous biomarker. Statistics in medicine 42 (7) (2023)
Ziyi Li, Yijian Huang, Dattatraya Patil, Mark Rubin, Martin G Sanda
Covariate-specific evaluation of continuous biomarker. Statistics in medicine 42 (7) (2023)
Ziyi Li, Yijian Huang, Dattatraya Patil, Mark Rubin, Martin G Sanda
Covariate-specific evaluation of continuous biomarker. Statistics in medicine 42 (7) (2023)
Ruoxing Li, Jianjun Zhang, Ziyi Li
EasyCellType: marker-based cell-type annotation by automatically querying multiple databases. Bioinformatics advances 3 (1) (2023)
Aiham Z Qdaisat, Sai-Ching Jim Yeung, Cristhiam H Rojas Hernandez, Pavani Samudrala, Mona J Kamal, Ziyi Li, Adriana H Wechsler
Characteristics and Outcomes of Intracranial Hemorrhage in Cancer Patients Visiting the Emergency Department. Journal of clinical medicine 11 (3) (2022)
Ziyi Li, Yizhuo Wang, Irene Ganan-Gomez, Simona Colla, Kim-Anh Do
A machine learning-based method for automatically identifying novel cells in annotating single-cell RNA-seq data. Bioinformatics (Oxford, England) 38 (21) (2022)
Xiaobo Sun, Xiaochu Lin, Ziyi Li, Hao Wu
A comprehensive comparison of supervised and unsupervised methods for cell type identification in single-cell RNA-seq. Briefings in bioinformatics 23 (2) (2022)
Yizhuo Wang, Christopher R Flowers, Ziyi Li, Xuelin Huang
CondiS web app: imputation of censored lifetimes for machine learning-based survival analysis. Bioinformatics (Oxford, England) 38 (17) (2022)
Irene Gañán-Gómez, Hui Yang, Feiyang Ma, Guillermo Montalban-Bravo, Natthakan Thongon, Valentina Marchica, Guillaume Richard-Carpentier, Kelly Sharon Chien, Ganiraju C Manyam, Feng Wang, Ana Alfonso, Shuaitong Chen, Caleb A Class, Rashmi Kanagal-Shamana, Justin P Ingram, Yamini Ogoti, Ashley Rose, Sanam Loghavi, Pamela Lockyer, Benedetta Cambo, Muharrem Muftuoglu, Sarah M Schneider, Vera Adema, Michael D McLellan, John Garza, Matteo Marchesini, Nicola Giuliani, Matteo Pellegrini, Jing Wang, Jason R Walker, Ziyi Li, Koichi Takahashi, Joel D Leverson, Carlos Bueso-Ramos, Michael Andreeff, Karen Clise-Dwyer, Guillermo Garcia Manero, Simona Colla
Stem cell architecture drives myelodysplastic syndrome progression and predicts response to venetoclax-based therapy. Nature medicine 28 (3) (2022)
Yunhee Kang, Ying Zhou, Yujing Li, Yanfei Han, Jie Xu, Weibo Niu, Ziyi Li, Shiying Liu, Hao Feng, Wen Huang, Ranhui Duan, Tianmin Xu, Nisha Raj, Feiran Zhang, Juan Dou, Chongchong Xu, Hao Wu, Gary J Bassell, Stephen T Warren, Emily G Allen, Peng Jin, Zhexing Wen
A human forebrain organoid model of fragile X syndrome exhibits altered neurogenesis and highlights new treatment strategies. Nature neuroscience 24 (10) (2021)
Ziyi Li, Xiaoqian Jiang, Yizhuo Wang, Yejin Kim
Applied machine learning in Alzheimer's disease research: omics, imaging, and clinical data. Emerging topics in life sciences (2021)
Elizabeth Prout Parks, Reneé H Moore, Ziyi Li, Chanelle T Bishop-Gilyard, Andrew R Garrett, Douglas L Hill, Yasmeen P Bruton, David B Sarwer
Assessing the Feasibility of a Social Media to Promote Weight Management Engagement in Adolescents with Severe Obesity: Pilot Study. JMIR research protocols 7 (3) (2018)