Reporting guidelines for human microbiome research: the STORMS checklist.
Chloe MirzayiAudrey Rensonnull nullnull nullFatima ZohraShaimaa ElsafouryLudwig GeistlingerLora J KasselmanKelly EckenrodeJanneke van de WijgertAmy LoughmanFrancine Z MarquesDavid A MacIntyreManimozhiyan ArumugamRimsha AzharFrancesco BeghiniKirk BergstromAmi BhattJordan E BisanzJonathan BraunHector Corrada BravoGregory A BuckFrederic BushmanDavid CaseroGerard ClarkeMaria Carmen ColladoPaul D CotterJohn F CryanRyan T DemmerSuzanne DevkotaEran ElinavJuan S EscobarJennifer FettweisRobert D FinnAnthony A FodorSofia ForslundAndre FrankeCesare FurlanelloJack GilbertElizabeth GriceBenjamin Haibe-KainsScott HandleyPamela HerdSusan HolmesJonathan P JacobsLisa KarstensRob KnightDan KnightsOmry KorenDouglas S KwonMorgan LangilleBrianna LindsayDermot McGovernAlice C McHardyShannon McWeeneyNoel T MuellerLuigi NeziMatthew OlmNoah PalmEdoardo PasolliJeroen RaesMatthew R RedinboMalte RühlemannR Balfour SartorPatrick D SchlossLynn SchrimlEran SegalMichelle ShardellThomas SharptonEkaterina SmirnovaHarry SokolJustin L SonnenburgSujatha SrinivasanLouise B ThingholmPeter J TurnbaughVaibhav UpadhyayRamona L WallsPaul WilmesTakuji YamadaGeorg ZellerMingyu ZhangNi ZhaoLiping ZhaoWenjun BaoAedin CulhaneViswanath DevanarayanJoaquin DopazoXiaohui FanMatthias FischerWendell JonesRebecca KuskoChristopher E MasonTim R MercerSusanna-Assunta SansoneAndreas SchererLeming ShiShraddha ThakkarWeida TongRuss WolfingerChristopher HunterNicola SegataCurtis HuttenhowerJennifer B DowdHeidi E JonesLevi WaldronPublished in: Nature medicine (2021)
The particularly interdisciplinary nature of human microbiome research makes the organization and reporting of results spanning epidemiology, biology, bioinformatics, translational medicine and statistics a challenge. Commonly used reporting guidelines for observational or genetic epidemiology studies lack key features specific to microbiome studies. Therefore, a multidisciplinary group of microbiome epidemiology researchers adapted guidelines for observational and genetic studies to culture-independent human microbiome studies, and also developed new reporting elements for laboratory, bioinformatics and statistical analyses tailored to microbiome studies. The resulting tool, called 'Strengthening The Organization and Reporting of Microbiome Studies' (STORMS), is composed of a 17-item checklist organized into six sections that correspond to the typical sections of a scientific publication, presented as an editable table for inclusion in supplementary materials. The STORMS checklist provides guidance for concise and complete reporting of microbiome studies that will facilitate manuscript preparation, peer review, and reader comprehension of publications and comparative analysis of published results.