A Marieke Oudelaar

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 23

Top Venues

Nature genetics

Nature communications

Biochemical Society transactions

Nature protocols

University of Oxford

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Oxford Oct 01 2018

United Kingdom

Junior Research Fellow :: MRC Weatherall Institute of Molecular Medicine

Publications

Elisa Oberbeckmann, Kimberly Quililan, Patrick Cramer, A Marieke Oudelaar
In vitro reconstitution of chromatin domains shows a role for nucleosome positioning in 3D genome organization. Nature genetics 56 (3) (2024)
Elisa Oberbeckmann, A Marieke Oudelaar
Genome organization across scales: mechanistic insights from in vitro reconstitution studies. Biochemical Society transactions (2024)
Elisa Oberbeckmann, Kimberly Quililan, Patrick Cramer, A Marieke Oudelaar
In vitro reconstitution of chromatin domains shows a role for nucleosome positioning in 3D genome organization. Nature genetics 56 (3) (2024)
Elisa Oberbeckmann, A Marieke Oudelaar
Genome organization across scales: mechanistic insights from in vitro reconstitution studies. Biochemical Society transactions 52 (2) (2024)
Elisa Oberbeckmann, Kimberly Quililan, Patrick Cramer, A Marieke Oudelaar
In vitro reconstitution of chromatin domains shows a role for nucleosome positioning in 3D genome organization. Nature genetics 56 (3) (2024)
Elisa Oberbeckmann, A Marieke Oudelaar
Genome organization across scales: mechanistic insights from in vitro reconstitution studies. Biochemical Society transactions 52 (2) (2024)
Elisa Oberbeckmann, Kimberly Quililan, Patrick Cramer, A Marieke Oudelaar
In vitro reconstitution of chromatin domains shows a role for nucleosome positioning in 3D genome organization. Nature genetics (2024)
Elisa Oberbeckmann, A Marieke Oudelaar
Genome organization across scales: mechanistic insights from in vitro reconstitution studies. Biochemical Society transactions 52 (2) (2024)
Elisa Oberbeckmann, Kimberly Quililan, Patrick Cramer, A Marieke Oudelaar
In vitro reconstitution of chromatin domains shows a role for nucleosome positioning in 3D genome organization. Nature genetics 56 (3) (2024)
Elisa Oberbeckmann, Kimberly Quililan, Patrick Cramer, A Marieke Oudelaar
In vitro reconstitution of chromatin domains shows a role for nucleosome positioning in 3D genome organization. Nature genetics (2024)
Shyam Ramasamy, Abrar Aljahani, Magdalena A Karpińska, T B Ngoc Cao, Taras Velychko, J Neos Cruz, Michael Lidschreiber, A Marieke Oudelaar
The Mediator complex regulates enhancer-promoter interactions. Nature structural & molecular biology (2023)
Damien J Downes, Alastair L Smith, Magdalena A Karpińska, Taras Velychko, Kevin Christophe Rue-Albrecht, David Sims, Thomas A Milne, James O J Davies, A Marieke Oudelaar, Jim R Hughes
Author Correction: Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture. Nature protocols (2023)
A Marieke Oudelaar
Deciphering the regulatory logic of a chromatin domain boundary. Nature genetics 54 (7) (2022)
Dominic D G Owens, Giorgio Anselmi, A Marieke Oudelaar, Damien J Downes, Alessandro Cavallo, Joe R Harman, Ron Schwessinger, Akin Bucakci, Lucas Greder, Sara de Ornellas, Danuta Jeziorska, Jelena Telenius, Jim R Hughes, Marella F T R de Bruijn
Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development. Nature communications 13 (1) (2022)
Damien J Downes, Alastair L Smith, Magdalena A Karpińska, Taras Velychko, Kevin Christophe Rue-Albrecht, David Sims, Thomas A Milne, James O J Davies, A Marieke Oudelaar, Jim R Hughes
Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture. Nature protocols 17 (2) (2022)
Abrar Aljahani, Peng Hua, Magdalena A Karpińska, Kimberly Quililan, James O J Davies, A Marieke Oudelaar
Analysis of sub-kilobase chromatin topology reveals nano-scale regulatory interactions with variable dependence on cohesin and CTCF. Nature communications 13 (1) (2022)
Andrew J King, Duantida Songdej, Damien J Downes, Robert A Beagrie, Siyu Liu, Megan Buckley, Peng Hua, Maria C Suciu, A Marieke Oudelaar, Lars L P Hanssen, Danuta Jeziorska, Nigel A Roberts, Stephanie J Carpenter, Helena S Francis, Jelena Telenius, Aude-Anais Olijnik, Jacqueline A Sharpe, Jacqueline Sloane-Stanley, Jennifer Eglinton, Mira T Kassouf, Stuart H Orkin, Len A Pennacchio, James O J Davies, Jim R Hughes, Douglas R Higgs, Christian Babbs
Reactivation of a developmentally silenced embryonic globin gene. Nature communications 12 (1) (2021)
Peng Hua, Mohsin Badat, Lars L P Hanssen, Lance D Hentges, Nicholas T Crump, Damien J Downes, Danuta M Jeziorska, A Marieke Oudelaar, Ron Schwessinger, Stephen Taylor, Thomas A Milne, Jim R Hughes, Douglas R Higgs, James O J Davies
Defining genome architecture at base-pair resolution. Nature 595 (7865) (2021)
Damien J Downes, Robert A Beagrie, Matthew E Gosden, Jelena Telenius, Stephanie J Carpenter, Lea Nussbaum, Sara De Ornellas, Martin Sergeant, Chris Q Eijsbouts, Ron Schwessinger, Jon Kerry, Nigel A Roberts, Arun Shivalingam, Afaf Helmy El-Sagheer, A Marieke Oudelaar, Tom Brown, Veronica J Buckle, James O J Davies, Jim R Hughes
High-resolution targeted 3C interrogation of cis-regulatory element organization at genome-wide scale. Nature communications 12 (1) (2021)
A Marieke Oudelaar, Douglas R Higgs
The relationship between genome structure and function. Nature reviews. Genetics 22 (3) (2020)
A Marieke Oudelaar, Caroline L Harrold, Lars L P Hanssen, Jelena M Telenius, Douglas R Higgs, Jim R Hughes
A revised model for promoter competition based on multi-way chromatin interactions at the α-globin locus. Nature communications 10 (1) (2019)
Laura C Godfrey, Nicholas T Crump, Ross Thorne, I-Jun Lau, Emmanouela Repapi, Dimitra Dimou, Alastair L Smith, Joe R Harman, Jelena M Telenius, A Marieke Oudelaar, Damien J Downes, Paresh Vyas, Jim R Hughes, Thomas A Milne
DOT1L inhibition reveals a distinct subset of enhancers dependent on H3K79 methylation. Nature communications 10 (1) (2019)
Lars L P Hanssen, Mira T Kassouf, A Marieke Oudelaar, Daniel Biggs, Chris Preece, Damien J Downes, Matthew Gosden, Jacqueline A Sharpe, Jacqueline A Sloane-Stanley, Jim R Hughes, Benjamin Davies, Douglas R Higgs
Tissue-specific CTCF-cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo. Nature cell biology 19 (8) (2017)

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Publication Activity (10 Years)

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A Marieke Oudelaar