Alan M Moses (Alan Moses)

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 13

Top Topics

Convolutional Neural Network

Transcription Factor

Top Venues

PLoS computational biology

Bioinformatics (Oxford, England)

This page only lists publications with an associated author ORCID identifier.

Publications

Andrew G Duncan, Jennifer A Mitchell, Alan M Moses
Improving the performance of supervised deep learning for regulatory genomics using phylogenetic augmentation. Bioinformatics (Oxford, England) 40 (4) (2024)
Andrew G Duncan, Jennifer A Mitchell, Alan M Moses
Improving the performance of supervised deep learning for regulatory genomics using phylogenetic augmentation. Bioinformatics (Oxford, England) 40 (4) (2024)
T Reid Alderson, Iva Pritišanac, Đesika Kolarić, Alan M Moses, Julie Deborah Forman-Kay
Systematic identification of conditionally folded intrinsically disordered regions by AlphaFold2. Proceedings of the National Academy of Sciences of the United States of America 120 (44) (2023)
Alex X Lu, Amy X Lu, Iva Pritišanac, Taraneh Zarin, Julie D Forman-Kay, Alan M Moses
Discovering molecular features of intrinsically disordered regions by using evolution for contrastive learning. PLoS computational biology 18 (6) (2022)
Ian S Hsu, Alan M Moses
Stochastic models for single-cell data: Current challenges and the way forward. The FEBS journal (2021)
Taraneh Zarin, Bob Strome, Gang Peng, Iva Pritišanac, Julie Deborah Forman-Kay, Alan M Moses
Identifying molecular features that are associated with biological function of intrinsically disordered protein regions. eLife 10 (2021)
Ian S Hsu, Bob Strome, Emma Lash, Nicole Robbins, Leah E Cowen, Alan M Moses
A functionally divergent intrinsically disordered region underlying the conservation of stochastic signaling. PLoS genetics 17 (9) (2021)
Elena Kuzmin, Benjamin VanderSluis, Alex N Nguyen Ba, Wen Wang, Elizabeth N Koch, Matej Usaj, Anton Khmelinskii, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Oren Kraus, Amy Tresenrider, Michael Pryszlak, Ming-Che Hu, Brenda Varriano, Michael Costanzo, Michael Knop, Alan M Moses, Chad L Myers, Brenda J Andrews, Charles Boone
Exploring whole-genome duplicate gene retention with complex genetic interaction analysis. Science (New York, N.Y.) 368 (6498) (2020)
Taraneh Zarin, Bob Strome, Alex N Nguyen Ba, Simon Alberti, Julie Deborah Forman-Kay, Alan M Moses
Proteome-wide signatures of function in highly diverged intrinsically disordered regions. eLife 8 (2019)
Ian S Hsu, Bob Strome, Sergey Plotnikov, Alan M Moses
A Noisy Analog-to-Digital Converter Connects Cytosolic Calcium Bursts to Transcription Factor Nuclear Localization Pulses in Yeast. G3 (Bethesda, Md.) 9 (2) (2019)
Alex X Lu, Oren Z Kraus, Sam Cooper, Alan M Moses
Learning unsupervised feature representations for single cell microscopy images with paired cell inpainting. PLoS computational biology 15 (9) (2019)
Alex X Lu, Yolanda T Chong, Ian Shen Hsu, Bob Strome, Louis-Francois Handfield, Oren Kraus, Brenda J Andrews, Alan M Moses
Integrating images from multiple microscopy screens reveals diverse patterns of change in the subcellular localization of proteins. eLife 7 (2018)
Alex N Nguyen Ba, Bob Strome, Selma Osman, Elizabeth-Ann Legere, Taraneh Zarin, Alan M Moses
Parallel reorganization of protein function in the spindle checkpoint pathway through evolutionary paths in the fitness landscape that appear neutral in laboratory experiments. PLoS genetics 13 (4) (2017)