Anthony Mathelier

ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 18

Top Venues

Nucleic acids research

Genetics

Communications biology

Genome medicine

Centre for Molecular Medicine Norway

Université Pierre et Marie Curie (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Centre for Molecular Medicine Norway May 01 2016

Norway

Group Leader

University of British Columbia Sep 01 2013 - Apr 30 2016

Canada

Deputy Group Leader :: Medical Genetics

University of British Columbia Jan 15 2011 - Aug 31 2013

Canada

Postdoctoral fellow

Education History

Université Pierre et Marie Curie Sep 01 2006 - Sep 30 2010

France

PHD :: Computer Science

Publications

Ieva Rauluseviciute, Timothée Launay, Guido Barzaghi, Sarvesh Nikumbh, Boris Lenhard, Arnaud Regis Krebs, Jaime A Castro-Mondragon, Anthony Mathelier
Identification of transcription factor co-binding patterns with non-negative matrix factorization. Nucleic acids research (2024)
Oriol Fornes, Tamar V Av-Shalom, Andrea J Korecki, Rachelle A Farkas, David J Arenillas, Anthony Mathelier, Elizabeth M Simpson, Wyeth W Wasserman
OnTarget: in silico design of MiniPromoters for targeted delivery of expression. Nucleic acids research (2023)
Ieva Rauluseviciute, Rafael Riudavets-Puig, Romain Blanc-Mathieu, Jaime A Castro-Mondragon, Katalin Ferenc, Vipin Kumar, Roza Berhanu Lemma, Jeremy Lucas, Jeanne Chèneby, Damir Baranasic, Aziz Khan, Oriol Fornes, Sveinung Gundersen, Morten Johansen, Eivind Hovig, Boris Lenhard, Albin Sandelin, Wyeth W Wasserman, Francois Parcy, Anthony Mathelier
JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic acids research (2023)
Roza Berhanu Lemma, Thomas Fleischer, Emily Martinsen, Marit Ledsaak, Vessela N Kristensen, Ragnhild Eskeland, Odd Stokke Gabrielsen, Anthony Mathelier
Pioneer transcription factors are associated with the modulation of DNA methylation patterns across cancers. Epigenetics & chromatin 15 (1) (2022)
Sunniva Stordal Bjørklund, Miriam Ragle Aure, Jari Häkkinen, Johan Vallon-Christersson, Surendra Kumar, Katrine Bull Evensen, Thomas Fleischer, Jorg Tost, null null, Kristine K Sahlberg, Anthony Mathelier, Gyan Bhanot, Shridar Ganesan, Xavier Tekpli, Vessela N Kristensen
Subtype and cell type specific expression of lncRNAs provide insight into breast cancer. Communications biology 5 (1) (2022)
Jaime A Castro-Mondragon, Miriam Ragle Aure, Ole Christian Lingjærde, Anita Langerød, John W M Martens, Anne-Lise Børresen-Dale, Vessela N Kristensen, Anthony Mathelier
Cis-regulatory mutations associate with transcriptional and post-transcriptional deregulation of gene regulatory programs in cancers. Nucleic acids research (2022)
Miriam Ragle Aure, Thomas Fleischer, Sunniva Bjørklund, Jørgen Ankill, Jaime A Castro-Mondragon, null null, Anne-Lise Børresen-Dale, Jorg Tost, Kristine K Sahlberg, Anthony Mathelier, Xavier Tekpli, Vessela N Kristensen
Crosstalk between microRNA expression and DNA methylation drives the hormone-dependent phenotype of breast cancer. Genome medicine 13 (1) (2021)
Jaime A Castro-Mondragon, Rafael Riudavets-Puig, Ieva Rauluseviciute, Roza Berhanu Lemma, Laura Turchi, Romain Blanc-Mathieu, Jeremy Lucas, Paul Boddie, Aziz Khan, Nicolás Manosalva Pérez, Oriol Fornes, Tiffany Y Leung, Alejandro Aguirre, Fayrouz Hammal, Daniel Schmelter, Damir Baranasic, Benoit Ballester, Albin Sandelin, Boris Lenhard, Klaas Vandepoele, Wyeth W Wasserman, Francois Parcy, Anthony Mathelier
JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles. Nucleic acids research (2021)
Aziz Khan, Rafael Riudavets Puig, Paul Boddie, Anthony Mathelier
BiasAway: command-line and web server to generate nucleotide composition-matched DNA background sequences. Bioinformatics (Oxford, England) 37 (11) (2021)
Arne V Pladsen, Gro Nilsen, Oscar M Rueda, Miriam R Aure, Ørnulf Borgan, Knut Liestøl, Valeria Vitelli, Arnoldo Frigessi, Anita Langerød, Anthony Mathelier, null null, Olav Engebråten, Vessela Kristensen, David C Wedge, Peter Van Loo, Carlos Caldas, Anne-Lise Børresen-Dale, Hege G Russnes, Ole Christian Lingjærde
DNA copy number motifs are strong and independent predictors of survival in breast cancer. Communications biology 3 (1) (2020)
Andrea J Korecki, Jack W Hickmott, Siu Ling Lam, Lisa Dreolini, Anthony Mathelier, Oliver Baker, Claudia Kuehne, Russell J Bonaguro, Jillian Smith, Chin-Vern Tan, Michelle Zhou, Daniel Goldowitz, Jan M Deussing, A Francis Stewart, Wyeth W Wasserman, Robert A Holt, Elizabeth M Simpson
Twenty-Seven Tamoxifen-Inducible iCre-Driver Mouse Strains for Eye and Brain, Including Seventeen Carrying a New Inducible-First Constitutive-Ready Allele. Genetics 211 (4) (2019)
Oriol Fornes, Marius Gheorghe, Phillip A Richmond, David J Arenillas, Wyeth W Wasserman, Anthony Mathelier
MANTA2, update of the Mongo database for the analysis of transcription factor binding site alterations. Scientific data 5 (2018)
Aziz Khan, Anthony Mathelier, Xuegong Zhang
Super-enhancers are transcriptionally more active and cell type-specific than stretch enhancers. Epigenetics 13 (9) (2018)
Charles-Henri Lecellier, Wyeth W Wasserman, Anthony Mathelier
Human Enhancers Harboring Specific Sequence Composition, Activity, and Genome Organization Are Linked to the Immune Response. Genetics 209 (4) (2018)
Aziz Khan, Alejandro Montenegro-Montero, Anthony Mathelier
Put science first and formatting later. EMBO reports 19 (5) (2018)
Thomas Fleischer, Xavier Tekpli, Anthony Mathelier, Shixiong Wang, Daniel Nebdal, Hari P Dhakal, Kristine Kleivi Sahlberg, Ellen Schlichting, null null, Anne-Lise Børresen-Dale, Elin Borgen, Bjørn Naume, Ragnhild Eskeland, Arnoldo Frigessi, Jorg Tost, Antoni Hurtado, Vessela N Kristensen
DNA methylation at enhancers identifies distinct breast cancer lineages. Nature communications 8 (1) (2017)
Derek de Rie, Imad Abugessaisa, Tanvir Alam, Erik Arner, Peter Arner, Haitham Ashoor, Gaby Åström, Magda Babina, Nicolas Bertin, A Maxwell Burroughs, Ailsa J Carlisle, Carsten O Daub, Michael Detmar, Ruslan Deviatiiarov, Alexandre Fort, Claudia Gebhard, Daniel Goldowitz, Sven Guhl, Thomas J Ha, Jayson Harshbarger, Akira Hasegawa, Kosuke Hashimoto, Meenhard Herlyn, Peter Heutink, Kelly J Hitchens, Chung-Chau Hon, Edward Huang, Yuri Ishizu, Chieko Kai, Takeya Kasukawa, Peter Klinken, Timo Lassmann, Charles-Henri Lecellier, Weonju Lee, Marina Lizio, Vsevolod J Makeev, Anthony Mathelier, Yulia A Medvedeva, Niklas Mejhert, Christopher J Mungall, Shohei Noma, Mitsuhiro Ohshima, Mariko Okada-Hatakeyama, Helena Persson, Patrizia Rizzu, Filip Roudnicky, Pål Saetrom, Hiroki Sato, Jessica Severin, Jay W Shin, Rolf K Swoboda, Hiroshi Tarui, Hiroo Toyoda, Kristoffer Vitting-Seerup, Louise Winteringham, Yoko Yamaguchi, Kayoko Yasuzawa, Misako Yoneda, Noriko Yumoto, Susan Zabierowski, Peter G Zhang, Christine A Wells, Kim M Summers, Hideya Kawaji, Albin Sandelin, Michael Rehli, null null, Yoshihide Hayashizaki, Piero Carnici, Alistair R R Forrest, Michiel J L de Hoon
An integrated expression atlas of miRNAs and their promoters in human and mouse. Nature biotechnology 35 (9) (2017)
Marina Lizio, Jayson Harshbarger, Imad Abugessaisa, Shuei Noguchi, Atsushi Kondo, Jessica Severin, Chris Mungall, David Arenillas, Anthony Mathelier, Yulia A Medvedeva, Andreas Lennartsson, Finn Drabløs, Jordan A Ramilowski, Owen Rackham, Julian Gough, Robin Andersson, Albin Sandelin, Hans Ienasescu, Hiromasa Ono, Hidemasa Bono, Yoshihide Hayashizaki, Piero Carninci, Alistair R R Forrest, Takeya Kasukawa, Hideya Kawaji
Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals. Nucleic acids research 45 (D1) (2016)

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Publication Activity (10 Years)

Top Topics

Top Venues

Anthony Mathelier