Brian W Davis (Brian Davis)

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 34

Top Topics

Cancer Stem Cells

Diabetic Retinopathy

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Scientific reports

Nature genetics

This page only lists publications with an associated author ORCID identifier.

Publications

Theodore S Kalbfleisch, Stephanie D McKay, Brenda M Murdoch, David L Adelson, Diego Almansa-Villa, Gabrielle M Becker, Linda M Beckett, María José Benítez-Galeano, Fernando Biase, Theresa M Casey, Edward Boyi Chuong, Emily Clark, Shannon M Clarke, Noelle Cockett, Christine Couldrey, Brian W Davis, Christine G Elsik, Thomas Faraut, Yahui Gao, Carine Genet, Patrick G S Grady, Jonathan Green, Richard Green, Dai-Lu Guan, Darren Erich Hagen, Gabrielle A Hartley, Michael P Heaton, Savannah J Hoyt, Wen Huang, Erich Jarvis, Jenna Kalleberg, Hasan Khatib, Klaus-Peter Koepfli, James Eugene Koltes, Sergey Koren, Christa Kuehn, Tosso Leeb, Alexander S Leonard, George E Liu, Wai Yee Low, Hunter McConnell, Kathryn McRae, Karen Miga, Michelle Mousel, Holly Neibergs, Temitayo Olagunju, Matt Pennell, Bruna Petry, Mirjam Pewsner, Adam M Phillippy, Brandon D Pickett, Paulene Pineda, Tamara Potapova, Satyanarayana Rachagani, Arang Rhie, Monique Rijnkels, Annie Robic, Nelida Rodriguez Osorio, Yana Safonova, Gustavo Schettini, Robert D Schnabel, Nagabhishek Sirpu Natesh, Morgan R Stegemiller, Jessica Storer, Paul Stothard, Caleb Stull, Gwenola Tosser-Klopp, German Matias Traglia, Christopher K Tuggle, Curtis P Van Tassell, Corey T Watson, Rosemarie Weikard, Klaus Wimmers, Shangqian Xie, Liu Yang, Timothy P L Smith, Rachel J O'Neill, Benjamin D Rosen
The Ruminant Telomere-to-Telomere (RT2T) Consortium. Nature genetics 56 (8) (2024)
Jessica M Lawson, Shebl E Salem, Donald Miller, Anne Kahler, Wilhelmina J van den Boer, Charlotte A Shilton, Tia Sever, Rebecca R Mouncey, Jenna Ward, Daniel J Hampshire, Alastair K Foote, Jill S Bryan, Rytis Juras, Oliver D Pynn, Brian W Davis, Rebecca R Bellone, Terje Raudsepp, Amanda M de Mestre
Naturally occurring horse model of miscarriage reveals temporal relationship between chromosomal aberration type and point of lethality. Proceedings of the National Academy of Sciences of the United States of America 121 (33) (2024)
Jessica M Lawson, Shebl E Salem, Donald Miller, Anne Kahler, Wilhelmina J van den Boer, Charlotte A Shilton, Tia Sever, Rebecca R Mouncey, Jenna Ward, Daniel J Hampshire, Alastair K Foote, Jill S Bryan, Rytis Juras, Oliver D Pynn, Brian W Davis, Rebecca R Bellone, Terje Raudsepp, Amanda M de Mestre
Naturally occurring horse model of miscarriage reveals temporal relationship between chromosomal aberration type and point of lethality. Proceedings of the National Academy of Sciences of the United States of America 121 (33) (2024)
Theodore S Kalbfleisch, Stephanie D McKay, Brenda M Murdoch, David L Adelson, Diego Almansa-Villa, Gabrielle M Becker, Linda M Beckett, María José Benítez-Galeano, Fernando Biase, Theresa M Casey, Edward Boyi Chuong, Emily Clark, Shannon M Clarke, Noelle Cockett, Christine Couldrey, Brian W Davis, Christine G Elsik, Thomas Faraut, Yahui Gao, Carine Genet, Patrick G S Grady, Jonathan Green, Richard Green, Dai-Lu Guan, Darren Erich Hagen, Gabrielle A Hartley, Michael P Heaton, Savannah J Hoyt, Wen Huang, Erich Jarvis, Jenna Kalleberg, Hasan Khatib, Klaus-Peter Koepfli, James Eugene Koltes, Sergey Koren, Christa Kuehn, Tosso Leeb, Alexander S Leonard, George E Liu, Wai Yee Low, Hunter McConnell, Kathryn McRae, Karen Miga, Michelle Mousel, Holly Neibergs, Temitayo Olagunju, Matt Pennell, Bruna Petry, Mirjam Pewsner, Adam M Phillippy, Brandon D Pickett, Paulene Pineda, Tamara Potapova, Satyanarayana Rachagani, Arang Rhie, Monique Rijnkels, Annie Robic, Nelida Rodriguez Osorio, Yana Safonova, Gustavo Schettini, Robert D Schnabel, Nagabhishek Sirpu Natesh, Morgan R Stegemiller, Jessica Storer, Paul Stothard, Caleb Stull, Gwenola Tosser-Klopp, German Matias Traglia, Christopher K Tuggle, Curtis P Van Tassell, Corey T Watson, Rosemarie Weikard, Klaus Wimmers, Shangqian Xie, Liu Yang, Timothy P L Smith, Rachel J O'Neill, Benjamin D Rosen
The Ruminant Telomere-to-Telomere (RT2T) Consortium. Nature genetics (2024)
Jessica M Lawson, Shebl E Salem, Donald Miller, Anne Kahler, Wilhelmina J van den Boer, Charlotte A Shilton, Tia Sever, Rebecca R Mouncey, Jenna Ward, Daniel J Hampshire, Alastair K Foote, Jill S Bryan, Rytis Juras, Oliver D Pynn, Brian W Davis, Rebecca R Bellone, Terje Raudsepp, Amanda M de Mestre
Naturally occurring horse model of miscarriage reveals temporal relationship between chromosomal aberration type and point of lethality. Proceedings of the National Academy of Sciences of the United States of America 121 (33) (2024)
Carl-Johan Rubin, McKaela Hodge, Rakan Naboulsi, Madeleine Beckman, Rebecca R Bellone, Angelica Kallenberg, Stephanie J'Usrey, Hajime Ohmura, Kazuhiro Seki, Risako Furukawa, Aoi Ohnuma, Brian W Davis, Teruaki Tozaki, Gabriella Lindgren, Leif Andersson
An intronic copy number variation in Syntaxin 17 determines speed of greying and melanoma incidence in Grey horses. Nature communications 15 (1) (2024)
McKaela A Hodge, Tasha Miller, Marcus A Weinman, Brandan Wustefeld Janssens, Shay Bracha, Brian W Davis
Cellular Transcriptomics of Carboplatin Resistance in a Metastatic Canine Osteosarcoma Cell Line. Genes 14 (3) (2023)
Kevin R Bredemeyer, LaDeana Hillier, Andrew J Harris, Graham M Hughes, Nicole M Foley, Colleen Lawless, Rachel A Carroll, Jessica M Storer, Mark A Batzer, Edward S Rice, Brian W Davis, Terje Raudsepp, Stephen J O'Brien, Leslie A Lyons, Wesley C Warren, William J Murphy
Single-haplotype comparative genomics provides insights into lineage-specific structural variation during cat evolution. Nature genetics (2023)
McKaela A Hodge, Tasha Miller, Marcus A Weinman, Brandan Wustefeld Janssens, Shay Bracha, Brian W Davis
Cellular Transcriptomics of Carboplatin Resistance in a Metastatic Canine Osteosarcoma Cell Line. Genes 14 (3) (2023)
Matthew J Jevit, Caitlin Castaneda, Nandina Paria, Pranab J Das, Donald Miller, Douglas F Antczak, Theodore S Kalbfleisch, Brian W Davis, Terje Raudsepp
Trio-binning of a hinny refines the comparative organization of the horse and donkey X chromosomes and reveals novel species-specific features. Scientific reports 13 (1) (2023)
Samuel F M Hart, Marisa A Yonemitsu, Rachael M Giersch, Fiona E S Garrett, Brian F Beal, Gloria Arriagada, Brian W Davis, Elaine A Ostrander, Stephen P Goff, Michael J Metzger
Centuries of genome instability and evolution in soft-shell clam, Mya arenaria, bivalve transmissible neoplasia. Nature cancer (2023)
Jennifer R S Meadows, Jeffrey M Kidd, Guo-Dong Wang, Heidi G Parker, Peter Z Schall, Matteo Bianchi, Matthew J Christmas, Katia Bougiouri, Reuben M Buckley, Christophe Hitte, Anthony K Nguyen, Chao Wang, Vidhya Jagannathan, Julia E Niskanen, Laurent Alain François Frantz, Meharji Arumilli, Sruthi Hundi, Kerstin Lindblad-Toh, Catarina Ginja, Kadek Karang Agustina, Catherine André, Adam R Boyko, Brian W Davis, Michaela Drögemüller, Xin-Yao Feng, Konstantinos Gkagkavouzis, Giorgos Iliopoulos, Alexander C Harris, Marjo K Hytönen, Daniela C Kalthoff, Yan-Hu Liu, Petros Lymberakis, Nikolaos Poulakakis, Ana Elisabete Pires, Fernando Racimo, Fabian Ramos-Almodovar, Peter Savolainen, Semina Venetsani, Imke Tammen, Alexandros Triantafyllidis, Bridgett M vonHoldt, Robert K Wayne, Greger Larson, Frank W Nicholas, Hannes T Lohi, Tosso Leeb, Ya-Ping Zhang, Elaine A Ostrander
Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture. Genome biology 24 (1) (2023)
McKaela A Hodge, Tasha Miller, Marcus A Weinman, Brandan Wustefeld Janssens, Shay Bracha, Brian W Davis
Cellular Transcriptomics of Carboplatin Resistance in a Metastatic Canine Osteosarcoma Cell Line. Genes 14 (3) (2023)
Carl-Johan Rubin, Erik D Enbody, Mariya P Dobreva, Arhat Abzhanov, Brian W Davis, Sangeet Lamichhaney, Mats E Pettersson, Ashley T Sendell-Price, C Grace Sprehn, Carlos A Valle, Karla Vasco, Ola Wallerman, B Rosemary Grant, Peter R Grant, Leif Andersson
Rapid adaptive radiation of Darwin's finches depends on ancestral genetic modules. Science advances 8 (27) (2022)
Alexandria E Gochenauer, Dayna L Dreger, Brian W Davis, Shawna R Cook, Katie E Barber, Kari J Ekenstedt
ABCG2 Polymorphisms and Predictive Fluoroquinolone Phototoxicity in Nondomestic Felids. Genes 13 (12) (2022)
Alexandria E Gochenauer, Dayna L Dreger, Brian W Davis, Shawna R Cook, Katie E Barber, Kari J Ekenstedt
ABCG2 Polymorphisms and Predictive Fluoroquinolone Phototoxicity in Nondomestic Felids. Genes 13 (12) (2022)
Alexandria E Gochenauer, Dayna L Dreger, Brian W Davis, Shawna R Cook, Katie E Barber, Kari J Ekenstedt
ABCG2 Polymorphisms and Predictive Fluoroquinolone Phototoxicity in Nondomestic Felids. Genes 13 (12) (2022)
Mehdi Momen, Sabrina H Brounts, Emily E Binversie, Susannah J Sample, Guilherme Jordão de Magalhães Rosa, Brian W Davis, Peter Muir
Selection signature analyses and genome-wide association reveal genomic hotspot regions that reflect differences between breeds of horse with contrasting risk of degenerative suspensory ligament desmitis. G3 (Bethesda, Md.) 12 (10) (2022)
Sarah A Hendricks, Julie L King, Calvin L Duncan, T Winston Vickers, Paul A Hohenlohe, Brian W Davis
Genomic Assessment of Cancer Susceptibility in the Threatened Catalina Island Fox ( Urocyon littoralis catalinae ). Genes 13 (8) (2022)
Alexandria E Gochenauer, Dayna L Dreger, Brian W Davis, Shawna R Cook, Katie E Barber, Kari J Ekenstedt
ABCG2 Polymorphisms and Predictive Fluoroquinolone Phototoxicity in Nondomestic Felids. Genes 13 (12) (2022)
Caitlin Castaneda, Lara Radović, Sabine Felkel, Rytis Juras, Brian W Davis, Ernest Gus Cothran, Barbara Wallner, Terje Raudsepp
Copy number variation of horse Y chromosome genes in normal equine populations and in horses with abnormal sex development and subfertility: relationship of copy number variations with Y haplogroups. G3 (Bethesda, Md.) 12 (12) (2022)
Alexandria E Gochenauer, Dayna L Dreger, Brian W Davis, Shawna R Cook, Katie E Barber, Kari J Ekenstedt
ABCG2 Polymorphisms and Predictive Fluoroquinolone Phototoxicity in Nondomestic Felids. Genes 13 (12) (2022)
Aitor Serres-Armero, Brian W Davis, Inna S Povolotskaya, Carlos Morcillo-Suarez, Jocelyn Plassais, David Juan, Elaine A Ostrander, Tomas Marques-Bonet
Copy number variation underlies complex phenotypes in domestic dog breeds and other canids. Genome research 31 (5) (2021)
Dustin A Therrien, Kranti Konganti, Jason J Gill, Brian W Davis, Andrew E Hillhouse, Jordyn Michalik, H Russell Cross, Gary C Smith, Thomas Matthew Taylor, Penny K Riggs
Complete Whole Genome Sequences of Escherichia coli Surrogate Strains and Comparison of Sequence Methods with Application to the Food Industry. Microorganisms 9 (3) (2021)
Jingyi Li, Mi-Ok Lee, Junfeng Chen, Brian W Davis, Benjamin J Dorshorst, Paul B Siegel, Masafumi Inaba, Ting-Xing Jiang, Cheng Ming Chuong, Leif Andersson
Cis -acting mutation affecting GJA5 transcription is underlying the Melanotic within-feather pigmentation pattern in chickens. Proceedings of the National Academy of Sciences of the United States of America 118 (41) (2021)
Matthew J Jevit, Brian W Davis, Caitlin Castaneda, Andrew E Hillhouse, Rytis Juras, Vladimir A Trifonov, Ahmed Tibary, Jorge C Pereira, Malcolm Andrew Ferguson-Smith, Terje Raudsepp
An 8.22 Mb Assembly and Annotation of the Alpaca (Vicugna pacos) Y Chromosome. Genes 12 (1) (2021)
Kylie M Cairns, Suriani Surbakti, Heidi G Parker, James K McIntyre, Hendra K Maury, Meagan Selvig, Margaretha Pangau-Adam, Apolo Safonpo, Leonardo Numberi, Dirk Y P Runtuboi, Elaine A Ostrander, Brian W Davis
Reply to Dwyer and Minnegal: Genetics supersedes observational records regarding New Guinea canids. Proceedings of the National Academy of Sciences of the United States of America 118 (12) (2021)
Vidhya Jagannathan, Christophe Hitte, Jeffrey M Kidd, Patrick Masterson, Terence D Murphy, Sarah Emery, Brian W Davis, Reuben M Buckley, Yan-Hu Liu, Xiang-Quan Zhang, Tosso Leeb, Ya-Ping Zhang, Elaine A Ostrander, Guo-Dong Wang
Dog10K_Boxer_Tasha_1.0: A Long-Read Assembly of the Dog Reference Genome. Genes 12 (6) (2021)
Reuben M Buckley, Brian W Davis, Wesley A Brashear, Fabiana Geraldo Farias, Kei Kuroki, Tina A Graves-Lindsay, LaDeana W Hillier, Milinn Kremitzki, Gang Li, Rondo P Middleton, Patrick Minx, Chad Tomlinson, Leslie A Lyons, William J Murphy, Wesley C Warren
A new domestic cat genome assembly based on long sequence reads empowers feline genomic medicine and identifies a novel gene for dwarfism. PLoS genetics 16 (10) (2020)
Jocelyn Plassais, Jaemin Kim, Brian W Davis, Danielle M Karyadi, Andrew N Hogan, Alex C Harris, Brennan Decker, Heidi G Parker, Elaine A Ostrander
Whole genome sequencing of canids reveals genomic regions under selection and variants influencing morphology. Nature communications 10 (1) (2019)
Barbara Gandolfi, Hasan Alhaddad, Mona Abdi, Leslie H Bach, Erica K Creighton, Brian W Davis, Jared E Decker, Nicholas H Dodman, Edward I Ginns, Jennifer C Grahn, Robert A Grahn, Bianca Haase, Jens Haggstrom, Michael J Hamilton, Christopher R Helps, Jennifer D Kurushima, Hannes Lohi, Maria Longeri, Richard Malik, Kathryn M Meurs, Michael J Montague, May Christine V Malicdan, William J Murphy, Sara M Nilson, Niels C Pedersen, Carlyn B Peterson, Clare Rusbridge, Rashid Saif, G Diane Shelton, Wesley C Warren, Muhammad Wasim, Leslie A Lyons
Author Correction: Applications and efficiencies of the first cat 63 K DNA array. Scientific reports 9 (1) (2019)
Jan E Janečka, Brian W Davis, Sharmila Ghosh, Nandina Paria, Pranab Jyoti Das, Ludovic Orlando, Mikkel Schubert, Martin K Nielsen, Tom A E Stout, Wesley Brashear, Gang Li, Charles D Johnson, Richard P Metz, Al Muatasim Al Zadjali, Charles C Love, Dickson D Varner, Daniel W Bellott, William J Murphy, Bhanu P Chowdhary, Terje Raudsepp
Horse Y chromosome assembly displays unique evolutionary features and putative stallion fertility genes. Nature communications 9 (1) (2018)
Barbara Gandolfi, Hasan Alhaddad, Mona Abdi, Leslie H Bach, Erica K Creighton, Brian W Davis, Jared E Decker, Nicholas H Dodman, Edward I Ginns, Jennifer C Grahn, Robert A Grahn, Bianca Haase, Jens Haggstrom, Michael J Hamilton, Christopher R Helps, Jennifer D Kurushima, Hannes Lohi, Maria Longeri, Richard Malik, Kathryn M Meurs, Michael J Montague, May Christine V Malicdan, William J Murphy, Sara M Nilson, Niels C Pedersen, Carlyn B Peterson, Clare Rusbridge, Rashid Saif, G Diane Shelton, Wesley C Warren, Muhammad Wasim, Leslie A Lyons
Applications and efficiencies of the first cat 63K DNA array. Scientific reports 8 (1) (2018)
Barbara Gandolfi, Hasan Alhaddad, Mona Abdi, Leslie H Bach, Erica K Creighton, Brian W Davis, Jared E Decker, Nicholas H Dodman, Edward I Ginns, Jennifer C Grahn, Robert A Grahn, Bianca Haase, Jens Haggstrom, Michael J Hamilton, Christopher R Helps, Jennifer D Kurushima, Hannes Lohi, Maria Longeri, Richard Malik, Kathryn M Meurs, Michael J Montague, May Christine V Malicdan, William J Murphy, Sara M Nilson, Niels C Pedersen, Carlyn B Peterson, Clare Rusbridge, Rashid Saif, G Diane Shelton, Wesley C Warren, Muhammad Wasim, Leslie A Lyons
Author Correction: Applications and efficiencies of the first cat 63K DNA array. Scientific reports 8 (1) (2018)