Tomas Marques-Bonet (Tomas Marques Bonet, Tomás Marquès-Bonet, Tomàs Marquès-Bonet)

Scopus Author ID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 92

Top Venues

Science (New York, N.Y.)

Nature

Proceedings of the National Academy of Sciences of the United States of America

Nature communications

Universitat Pompeu Fabra

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Universitat Pompeu Fabra Dec 01 2011

Spain

ICREA Researcher :: CEXS

Publications

Lisa Schrade, Nancy Mah, Anita E Bandrowski, Ying Chen, Johannes Dewender, Sebastian Diecke, Christian Hiepen, Madeline A Lancaster, Tomas Marques-Bonet, Sira Martinez, Sabine C Mueller, Christopher S Navara, Alessandro Prigione, Stefanie Seltmann, Jaroslaw Sochacki, Magdalena A Sutcliffe, Vera Zywitza, Thomas B Hildebrandt, Andreas Kurtz
A Standardized Nomenclature Design for Systematic Referencing and Identification of Animal Cellular Material. Animals : an open access journal from MDPI 14 (11) (2024)
Delphine Larivière, Linelle Abueg, Nadolina Brajuka, Cristóbal Gallardo-Alba, Bjoern Andreas Gruening, Byung June Ko, Alex Ostrovsky, Marc Palmada-Flores, Brandon D Pickett, Keon Rabbani, Agostinho Antunes, Jennifer R Balacco, Mark J P Chaisson, Haoyu Cheng, Joanna Collins, Melanie Couture, Alexandra A Denisova, Olivier Fedrigo, Guido Roberto Gallo, Alice Maria Giani, Grenville MacDonald Gooder, Kathleen Horan, Nivesh Jain, Cassidy Johnson, Heebal Kim, Chul Lee, Tomas Marques-Bonet, Brian O'Toole, Arang Rhie, Simona Secomandi, Marcella Sozzoni, Tatiana Tilley, Marcela Uliano-Silva, Marius van den Beek, Robert W Williams, Robert M Waterhouse, Adam M Phillippy, Erich D Jarvis, Michael C Schatz, Anton Nekrutenko, Giulio Formenti
Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy. Nature biotechnology (2024)
Sook Wah Yee, Luis Ferrández-Peral, Pol Alentorn-Moron, Claudia Fontsere, Merve Ceylan, Megan L Koleske, Niklas Handin, Virginia M Artegoitia, Giovanni Lara, Huan-Chieh Chien, Xujia Zhou, Jacques Dainat, Arthur O Zalevsky, Andrej Sali, Colin M Brand, Finn D Wolfreys, Jia Yang, Jason E Gestwicki, Anthony Capra, Per Artursson, John W Newman, Tomas Marques-Bonet, Kathleen M Giacomini
Illuminating the function of the orphan transporter, SLC22A10, in humans and other primates. Nature communications 15 (1) (2024)
Delphine Larivière, Linelle Abueg, Nadolina Brajuka, Cristóbal Gallardo-Alba, Bjoern Andreas Gruening, Byung June Ko, Alex Ostrovsky, Marc Palmada-Flores, Brandon D Pickett, Keon Rabbani, Agostinho Antunes, Jennifer R Balacco, Mark J P Chaisson, Haoyu Cheng, Joanna Collins, Melanie Couture, Alexandra A Denisova, Olivier Fedrigo, Guido Roberto Gallo, Alice Maria Giani, Grenville MacDonald Gooder, Kathleen Horan, Nivesh Jain, Cassidy Johnson, Heebal Kim, Chul Lee, Tomas Marques-Bonet, Brian O'Toole, Arang Rhie, Simona Secomandi, Marcella Sozzoni, Tatiana Tilley, Marcela Uliano-Silva, Marius van den Beek, Robert W Williams, Robert M Waterhouse, Adam M Phillippy, Erich D Jarvis, Michael C Schatz, Anton Nekrutenko, Giulio Formenti
Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy. Nature biotechnology 42 (3) (2024)
Lisa Schrade, Nancy Mah, Anita E Bandrowski, Ying Chen, Johannes Dewender, Sebastian Diecke, Christian Hiepen, Madeline A Lancaster, Tomas Marques-Bonet, Sira Martinez, Sabine C Mueller, Christopher S Navara, Alessandro Prigione, Stefanie Seltmann, Jaroslaw Sochacki, Magdalena A Sutcliffe, Vera Zywitza, Thomas B Hildebrandt, Andreas Kurtz
A Standardized Nomenclature Design for Systematic Referencing and Identification of Animal Cellular Material. Animals : an open access journal from MDPI 14 (11) (2024)
Sook Wah Yee, Luis Ferrández-Peral, Pol Alentorn-Moron, Claudia Fontsere, Merve Ceylan, Megan L Koleske, Niklas Handin, Virginia M Artegoitia, Giovanni Lara, Huan-Chieh Chien, Xujia Zhou, Jacques Dainat, Arthur O Zalevsky, Andrej Sali, Colin M Brand, Finn D Wolfreys, Jia Yang, Jason E Gestwicki, Anthony Capra, Per Artursson, John W Newman, Tomas Marques-Bonet, Kathleen M Giacomini
Illuminating the function of the orphan transporter, SLC22A10, in humans and other primates. Nature communications 15 (1) (2024)
Sook Wah Yee, Luis Ferrández-Peral, Pol Alentorn-Moron, Claudia Fontsere, Merve Ceylan, Megan L Koleske, Niklas Handin, Virginia M Artegoitia, Giovanni Lara, Huan-Chieh Chien, Xujia Zhou, Jacques Dainat, Arthur O Zalevsky, Andrej Sali, Colin M Brand, Finn D Wolfreys, Jia Yang, Jason E Gestwicki, Anthony Capra, Per Artursson, John W Newman, Tomas Marques-Bonet, Kathleen M Giacomini
Illuminating the function of the orphan transporter, SLC22A10, in humans and other primates. Nature communications 15 (1) (2024)
Sook Wah Yee, Luis Ferrández-Peral, Pol Alentorn-Moron, Claudia Fontsere, Merve Ceylan, Megan L Koleske, Niklas Handin, Virginia M Artegoitia, Giovanni Lara, Huan-Chieh Chien, Xujia Zhou, Jacques Dainat, Arthur O Zalevsky, Andrej Sali, Colin M Brand, Finn D Wolfreys, Jia Yang, Jason E Gestwicki, Anthony Capra, Per Artursson, John W Newman, Tomas Marques-Bonet, Kathleen M Giacomini
Illuminating the function of the orphan transporter, SLC22A10, in humans and other primates. Nature communications 15 (1) (2024)
Delphine Larivière, Linelle Abueg, Nadolina Brajuka, Cristóbal Gallardo-Alba, Bjoern Andreas Gruening, Byung June Ko, Alex Ostrovsky, Marc Palmada-Flores, Brandon D Pickett, Keon Rabbani, Agostinho Antunes, Jennifer R Balacco, Mark J P Chaisson, Haoyu Cheng, Joanna Collins, Melanie Couture, Alexandra A Denisova, Olivier Fedrigo, Guido Roberto Gallo, Alice Maria Giani, Grenville MacDonald Gooder, Kathleen Horan, Nivesh Jain, Cassidy Johnson, Heebal Kim, Chul Lee, Tomas Marques-Bonet, Brian O'Toole, Arang Rhie, Simona Secomandi, Marcella Sozzoni, Tatiana Tilley, Marcela Uliano-Silva, Marius van den Beek, Robert W Williams, Robert M Waterhouse, Adam M Phillippy, Erich D Jarvis, Michael C Schatz, Anton Nekrutenko, Giulio Formenti
Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy. Nature biotechnology (2024)
Delphine Larivière, Linelle Abueg, Nadolina Brajuka, Cristóbal Gallardo-Alba, Bjoern Andreas Gruening, Byung June Ko, Alex Ostrovsky, Marc Palmada-Flores, Brandon D Pickett, Keon Rabbani, Agostinho Antunes, Jennifer R Balacco, Mark J P Chaisson, Haoyu Cheng, Joanna Collins, Melanie Couture, Alexandra A Denisova, Olivier Fedrigo, Guido Roberto Gallo, Alice Maria Giani, Grenville MacDonald Gooder, Kathleen Horan, Nivesh Jain, Cassidy Johnson, Heebal Kim, Chul Lee, Tomas Marques-Bonet, Brian O'Toole, Arang Rhie, Simona Secomandi, Marcella Sozzoni, Tatiana Tilley, Marcela Uliano-Silva, Marius van den Beek, Robert W Williams, Robert M Waterhouse, Adam M Phillippy, Erich D Jarvis, Michael C Schatz, Anton Nekrutenko, Giulio Formenti
Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy. Nature biotechnology 42 (3) (2024)
Aryn P Wilder, Megan Ann Supple, Ayshwarya Subramanian, Anish Mudide, Ross Swofford, Aitor Serres-Armero, Cynthia C Steiner, Klaus-Peter Koepfli, Diane P Genereux, Elinor K Karlsson, Kerstin Lindblad-Toh, Tomas Marques-Bonet, Violeta Munoz Fuentes, Kathleen Foley, Wynn K Meyer, null null, Oliver A Ryder, Joshua D Kapp, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Bruce W Birren, Kevin R Bredemeyer, Ana M Breit, Matthew J Christmas, Hiram Clawson, Joana Damas, Federica Di Palma, Mark Diekhans, Michael X Dong, Eduardo Eizirik, Kaili Fan, Cornelia Fanter, Nicole M Foley, Karin Forsberg-Nilsson, Carlos J Garcia, John Gatesy, Steven Gazal, Diane P Genereux, Linda Goodman, Jenna Grimshaw, Michaela K Halsey, Andrew J Harris, Glenn Hickey, Michael Hiller, Allyson G Hindle, Robert M Hubley, Graham M Hughes, Jeremy Johnson, David Juan, Irene M Kaplow, Elinor K Karlsson, Kathleen C Keough, Bogdan Kirilenko, Klaus-Peter Koepfli, Jennifer M Korstian, Amanda Kowalczyk, Sergey V Kozyrev, Alyssa J Lawler, Colleen Lawless, Thomas Lehmann, Danielle L Levesque, Harris A Lewin, Xue Li, Abigail Lind, Kerstin Lindblad-Toh, Ava Mackay-Smith, Voichita D Marinescu, Tomas Marques-Bonet, Victor C Mason, Jennifer R S Meadows, Wynn K Meyer, Jill E Moore, Lucas R Moreira, Diana D Moreno-Santillan, Kathleen M Morrill, Gerard Muntané, William J Murphy, Arcadi Navarro, Martin Nweeia, Sylvia Ortmann, Austin Osmanski, Benedict Paten, Nicole S Paulat, Andreas R Pfenning, BaDoi N Phan, Katherine S Pollard, Henry E Pratt, David A Ray, Steven K Reilly, Jeb R Rosen, Irina Ruf, Louise Ryan, Oliver A Ryder, Pardis C Sabeti, Daniel E Schäffer, Aitor Serres, Beth Shapiro, Arian F A Smit, Mark Springer, Chaitanya Srinivasan, Cynthia Steiner, Jessica M Storer, Kevin A M Sullivan, Patrick F Sullivan, Elisabeth Sundström, Megan A Supple, Ross Swofford, Joy-El Talbot, Emma Teeling, Jason Turner-Maier, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Chao Wang, Juehan Wang, Zhiping Weng, Aryn P Wilder, Morgan E Wirthlin, James R Xue, Xiaomeng Zhang
The contribution of historical processes to contemporary extinction risk in placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Aryn P Wilder, Megan Ann Supple, Ayshwarya Subramanian, Anish Mudide, Ross Swofford, Aitor Serres-Armero, Cynthia C Steiner, Klaus-Peter Koepfli, Diane P Genereux, Elinor K Karlsson, Kerstin Lindblad-Toh, Tomas Marques-Bonet, Violeta Munoz Fuentes, Kathleen Foley, Wynn K Meyer, null null, Oliver A Ryder, Joshua D Kapp, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Bruce W Birren, Kevin R Bredemeyer, Ana M Breit, Matthew J Christmas, Hiram Clawson, Joana Damas, Federica Di Palma, Mark Diekhans, Michael X Dong, Eduardo Eizirik, Kaili Fan, Cornelia Fanter, Nicole M Foley, Karin Forsberg-Nilsson, Carlos J Garcia, John Gatesy, Steven Gazal, Diane P Genereux, Linda Goodman, Jenna Grimshaw, Michaela K Halsey, Andrew J Harris, Glenn Hickey, Michael Hiller, Allyson G Hindle, Robert M Hubley, Graham M Hughes, Jeremy Johnson, David Juan, Irene M Kaplow, Elinor K Karlsson, Kathleen C Keough, Bogdan Kirilenko, Klaus-Peter Koepfli, Jennifer M Korstian, Amanda Kowalczyk, Sergey V Kozyrev, Alyssa J Lawler, Colleen Lawless, Thomas Lehmann, Danielle L Levesque, Harris A Lewin, Xue Li, Abigail Lind, Kerstin Lindblad-Toh, Ava Mackay-Smith, Voichita D Marinescu, Tomas Marques-Bonet, Victor C Mason, Jennifer R S Meadows, Wynn K Meyer, Jill E Moore, Lucas R Moreira, Diana D Moreno-Santillan, Kathleen M Morrill, Gerard Muntané, William J Murphy, Arcadi Navarro, Martin Nweeia, Sylvia Ortmann, Austin Osmanski, Benedict Paten, Nicole S Paulat, Andreas R Pfenning, BaDoi N Phan, Katherine S Pollard, Henry E Pratt, David A Ray, Steven K Reilly, Jeb R Rosen, Irina Ruf, Louise Ryan, Oliver A Ryder, Pardis C Sabeti, Daniel E Schäffer, Aitor Serres, Beth Shapiro, Arian F A Smit, Mark Springer, Chaitanya Srinivasan, Cynthia Steiner, Jessica M Storer, Kevin A M Sullivan, Patrick F Sullivan, Elisabeth Sundström, Megan A Supple, Ross Swofford, Joy-El Talbot, Emma Teeling, Jason Turner-Maier, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Chao Wang, Juehan Wang, Zhiping Weng, Aryn P Wilder, Morgan E Wirthlin, James R Xue, Xiaomeng Zhang
The contribution of historical processes to contemporary extinction risk in placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Aryn P Wilder, Megan Ann Supple, Ayshwarya Subramanian, Anish Mudide, Ross Swofford, Aitor Serres-Armero, Cynthia C Steiner, Klaus-Peter Koepfli, Diane P Genereux, Elinor K Karlsson, Kerstin Lindblad-Toh, Tomas Marques-Bonet, Violeta Munoz Fuentes, Kathleen Foley, Wynn K Meyer, null null, Oliver A Ryder, Joshua D Kapp
The contribution of historical processes to contemporary extinction risk in placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Aryn P Wilder, Megan Ann Supple, Ayshwarya Subramanian, Anish Mudide, Ross Swofford, Aitor Serres-Armero, Cynthia C Steiner, Klaus-Peter Koepfli, Diane P Genereux, Elinor K Karlsson, Kerstin Lindblad-Toh, Tomas Marques-Bonet, Violeta Munoz Fuentes, Kathleen Foley, Wynn K Meyer, null null, Oliver A Ryder, Joshua D Kapp
The contribution of historical processes to contemporary extinction risk in placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Blair P Bentley, Tomás Carrasco-Valenzuela, Elisa Karen Silva Ramos, Harvinder Pawar, Larissa Souza Arantes, Alana Alexander, Shreya M Banerjee, Patrick Masterson, Martin Kuhlwilm, Martin Pippel, Jacquelyn Mountcastle, Bettina Haase, Marcela Uliano-Silva, Giulio Formenti, Kerstin Howe, William Chow, Alan Tracey, Ying Sims, Sarah Pelan, Jonathan M D Wood, Kelsey Yetsko, Justin R Perrault, Kelly Stewart, Scott R Benson, Yaniv Levy, Erica V Todd, H Bradley Shaffer, Peter Scott, Brian T Henen, Robert W Murphy, David W Mohr, Alan F Scott, David J Duffy, Neil J Gemmell, Alexander Suh, Sylke Winkler, Françoise Thibaud-Nissen, Mariana F Nery, Tomas Marques-Bonet, Agostinho Antunes, Yaron Tikochinski, Peter H Dutton, Olivier Fedrigo, Eugene W Myers, Erich D Jarvis, Camila J Mazzoni, Lisa M Komoroske
Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories. Proceedings of the National Academy of Sciences of the United States of America 120 (7) (2023)
David Juan, Gabriel Santpere Baró, Joanna L Kelley, Omar E Cornejo, Tomas Marques-Bonet
Current advances in primate genomics: novel approaches for understanding evolution and disease. Nature reviews. Genetics (2023)
Matthew J Christmas, Irene M Kaplow, Diane P Genereux, Michael X Dong, Graham M Hughes, Xue Li, Patrick F Sullivan, Allyson G Hindle, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Ana M Breit, Mark E Diekhans, Cornelia Fanter, Nicole M Foley, Daniel B Goodman, Linda Goodman, Kathleen C Keough, Bogdan M Kirilenko, Amanda Kowalczyk, Colleen Lawless, Abigail L Lind, Jennifer R S Meadows, Lucas R Moreira, Ruby W Redlich, Louise Ryan, Ross Swofford, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Ashley R Brown, Joana Damas, Kaili Fan, John Gatesy, Jenna R Grimshaw, Jeremy Johnson, Sergey V Kozyrev, Alyssa J Lawler, Voichita D Marinescu, Kathleen M Morrill, Austin B Osmanski, Nicole S Paulat, BaDoi N Phan, Steven K Reilly, Daniel E Schäffer, Cynthia C Steiner, Megan Ann Supple, Aryn P Wilder, Morgan E Wirthlin, James R Xue, null null, Bruce W Birren, Steven Gazal, Robert M Hubley, Klaus-Peter Koepfli, Tomas Marques-Bonet, Wynn K Meyer, Martin T Nweeia, Pardis C Sabeti, Joshua D Kapp, Arian F A Smit, Mark S Springer, Emma C Teeling, Nishigandha Phalke, Michael Hiller, Danielle L Levesque, Harris A Lewin, William J Murphy, Arcadi Navarro, Benedict Paten, Katherine S Pollard, David A Ray, Irina Ruf, Oliver A Ryder, Andreas R Pfenning, Kerstin Lindblad-Toh, Elinor K Karlsson, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Bruce W Birren, Kevin R Bredemeyer, Ana M Breit, Matthew J Christmas, Hiram Clawson, Joana Damas, Federica Di Palma, Mark Diekhans, Michael X Dong, Eduardo Eizirik, Kaili Fan, Cornelia Fanter, Nicole M Foley, Karin Forsberg-Nilsson, Carlos J Garcia, John Gatesy, Steven Gazal, Diane P Genereux, Linda Goodman, Jenna Grimshaw, Michaela K Halsey, Andrew J Harris, Glenn Hickey, Michael Hiller, Allyson G Hindle, Robert M Hubley, Graham M Hughes, Jeremy Johnson, David Juan, Irene M Kaplow, Elinor K Karlsson, Kathleen C Keough, Bogdan Kirilenko, Klaus-Peter Koepfli, Jennifer M Korstian, Amanda Kowalczyk, Sergey V Kozyrev, Alyssa J Lawler, Colleen Lawless, Thomas Lehmann, Danielle L Levesque, Harris A Lewin, Xue Li, Abigail Lind, Kerstin Lindblad-Toh, Ava Mackay-Smith, Voichita D Marinescu, Tomas Marques-Bonet, Victor C Mason, Jennifer R S Meadows, Wynn K Meyer, Jill E Moore, Lucas R Moreira, Diana D Moreno-Santillan, Kathleen M Morrill, Gerard Muntané, William J Murphy, Arcadi Navarro, Martin Nweeia, Sylvia Ortmann, Austin Osmanski, Benedict Paten, Nicole S Paulat, Andreas R Pfenning, BaDoi N Phan, Katherine S Pollard, Henry E Pratt, David A Ray, Steven K Reilly, Jeb R Rosen, Irina Ruf, Louise Ryan, Oliver A Ryder, Pardis C Sabeti, Daniel E Schäffer, Aitor Serres, Beth Shapiro, Arian F A Smit, Mark Springer, Chaitanya Srinivasan, Cynthia Steiner, Jessica M Storer, Kevin A M Sullivan, Patrick F Sullivan, Elisabeth Sundström, Megan A Supple, Ross Swofford, Joy-El Talbot, Emma Teeling, Jason Turner-Maier, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Chao Wang, Juehan Wang, Zhiping Weng, Aryn P Wilder, Morgan E Wirthlin, James R Xue, Xiaomeng Zhang
Evolutionary constraint and innovation across hundreds of placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Yang Zhou, Xiaoyu Zhan, Jiazheng Jin, Long Zhou, Juraj Bergman, Xuemei Li, Marjolaine Marie C Rousselle, Meritxell Riera Belles, Lan Zhao, Miaoquan Fang, Jiawei Chen, Qi Fang, Lukas F K Kuderna, Tomas Marques-Bonet, Haruka Kitayama, Takashi Hayakawa, Yong-Gang Yao, Huanming Yang, David N Cooper, Xiao-Guang Qi, Dong-Dong Wu, Mikkel Heide Schierup, Guo-Jie Zhang
Eighty million years of rapid evolution of the primate Y chromosome. Nature ecology & evolution (2023)
Sook Wah Yee, Luis Ferrández-Peral, Pol Alentorn, Claudia Fontsere, Merve Ceylan, Megan L Koleske, Niklas Handin, Virginia M Artegoitia, Giovanni Lara, Huan-Chieh Chien, Xujia Zhou, Jacques Dainat, Arthur O Zalevsky, Andrej Sali, Colin M Brand, Anthony Capra, Per Artursson, John W Newman, Tomas Marques-Bonet, Kathleen M Giacomini
Illuminating the Function of the Orphan Transporter, SLC22A10 in Humans and Other Primates. bioRxiv : the preprint server for biology (2023)
Matthew J Christmas, Irene M Kaplow, Diane P Genereux, Michael X Dong, Graham M Hughes, Xue Li, Patrick F Sullivan, Allyson G Hindle, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Ana M Breit, Mark E Diekhans, Cornelia Fanter, Nicole M Foley, Daniel B Goodman, Linda Goodman, Kathleen C Keough, Bogdan M Kirilenko, Amanda Kowalczyk, Colleen Lawless, Abigail L Lind, Jennifer R S Meadows, Lucas R Moreira, Ruby W Redlich, Louise Ryan, Ross Swofford, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Ashley R Brown, Joana Damas, Kaili Fan, John Gatesy, Jenna R Grimshaw, Jeremy Johnson, Sergey V Kozyrev, Alyssa J Lawler, Voichita D Marinescu, Kathleen M Morrill, Austin B Osmanski, Nicole S Paulat, BaDoi N Phan, Steven K Reilly, Daniel E Schäffer, Cynthia C Steiner, Megan Ann Supple, Aryn P Wilder, Morgan E Wirthlin, James R Xue, null null, Bruce W Birren, Steven Gazal, Robert M Hubley, Klaus-Peter Koepfli, Tomas Marques-Bonet, Wynn K Meyer, Martin T Nweeia, Pardis C Sabeti, Joshua D Kapp, Arian F A Smit, Mark S Springer, Emma C Teeling, Nishigandha Phalke, Michael Hiller, Danielle L Levesque, Harris A Lewin, William J Murphy, Arcadi Navarro, Benedict Paten, Katherine S Pollard, David A Ray, Irina Ruf, Oliver A Ryder, Andreas R Pfenning, Kerstin Lindblad-Toh, Elinor K Karlsson, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Bruce W Birren, Kevin R Bredemeyer, Ana M Breit, Matthew J Christmas, Hiram Clawson, Joana Damas, Federica Di Palma, Mark Diekhans, Michael X Dong, Eduardo Eizirik, Kaili Fan, Cornelia Fanter, Nicole M Foley, Karin Forsberg-Nilsson, Carlos J Garcia, John Gatesy, Steven Gazal, Diane P Genereux, Linda Goodman, Jenna Grimshaw, Michaela K Halsey, Andrew J Harris, Glenn Hickey, Michael Hiller, Allyson G Hindle, Robert M Hubley, Graham M Hughes, Jeremy Johnson, David Juan, Irene M Kaplow, Elinor K Karlsson, Kathleen C Keough, Bogdan Kirilenko, Klaus-Peter Koepfli, Jennifer M Korstian, Amanda Kowalczyk, Sergey V Kozyrev, Alyssa J Lawler, Colleen Lawless, Thomas Lehmann, Danielle L Levesque, Harris A Lewin, Xue Li, Abigail Lind, Kerstin Lindblad-Toh, Ava Mackay-Smith, Voichita D Marinescu, Tomas Marques-Bonet, Victor C Mason, Jennifer R S Meadows, Wynn K Meyer, Jill E Moore, Lucas R Moreira, Diana D Moreno-Santillan, Kathleen M Morrill, Gerard Muntané, William J Murphy, Arcadi Navarro, Martin Nweeia, Sylvia Ortmann, Austin Osmanski, Benedict Paten, Nicole S Paulat, Andreas R Pfenning, BaDoi N Phan, Katherine S Pollard, Henry E Pratt, David A Ray, Steven K Reilly, Jeb R Rosen, Irina Ruf, Louise Ryan, Oliver A Ryder, Pardis C Sabeti, Daniel E Schäffer, Aitor Serres, Beth Shapiro, Arian F A Smit, Mark Springer, Chaitanya Srinivasan, Cynthia Steiner, Jessica M Storer, Kevin A M Sullivan, Patrick F Sullivan, Elisabeth Sundström, Megan A Supple, Ross Swofford, Joy-El Talbot, Emma Teeling, Jason Turner-Maier, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Chao Wang, Juehan Wang, Zhiping Weng, Aryn P Wilder, Morgan E Wirthlin, James R Xue, Xiaomeng Zhang
Evolutionary constraint and innovation across hundreds of placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Petko P Fiziev, Jeremy F McRae, Jacob C Ulirsch, Jacqueline S Dron, Tobias Hamp, Yanshen Yang, Pierrick Wainschtein, Zijian Ni, Joshua G Schraiber, Hong Gao, Dylan Cable, Yair Field, François Aguet, Marc Fasnacht, Ahmed A Metwally, Jeffrey Rogers, Tomas Marques-Bonet, Michael J Bamshad, Anne H O'Donnell-Luria, Amit V Khera, Kyle Kai-How Farh
Rare penetrant mutations confer severe risk of common diseases. Science (New York, N.Y.) 380 (6648) (2023)
Blair P Bentley, Tomás Carrasco-Valenzuela, Elisa Karen Silva Ramos, Harvinder Pawar, Larissa Souza Arantes, Alana Alexander, Shreya M Banerjee, Patrick Masterson, Martin Kuhlwilm, Martin Pippel, Jacquelyn Mountcastle, Bettina Haase, Marcela Uliano-Silva, Giulio Formenti, Kerstin Howe, William Chow, Alan Tracey, Ying Sims, Sarah Pelan, Jonathan M D Wood, Kelsey Yetsko, Justin R Perrault, Kelly Stewart, Scott R Benson, Yaniv Levy, Erica V Todd, H Bradley Shaffer, Peter Scott, Brian T Henen, Robert W Murphy, David W Mohr, Alan F Scott, David J Duffy, Neil J Gemmell, Alexander Suh, Sylke Winkler, Françoise Thibaud-Nissen, Mariana F Nery, Tomas Marques-Bonet, Agostinho Antunes, Yaron Tikochinski, Peter H Dutton, Olivier Fedrigo, Eugene W Myers, Erich D Jarvis, Camila J Mazzoni, Lisa M Komoroske
Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories. Proceedings of the National Academy of Sciences of the United States of America 120 (7) (2023)
Matthew J Christmas, Irene M Kaplow, Diane P Genereux, Michael X Dong, Graham M Hughes, Xue Li, Patrick F Sullivan, Allyson G Hindle, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Ana M Breit, Mark E Diekhans, Cornelia Fanter, Nicole M Foley, Daniel B Goodman, Linda Goodman, Kathleen C Keough, Bogdan M Kirilenko, Amanda Kowalczyk, Colleen Lawless, Abigail L Lind, Jennifer R S Meadows, Lucas R Moreira, Ruby W Redlich, Louise Ryan, Ross Swofford, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Ashley R Brown, Joana Damas, Kaili Fan, John Gatesy, Jenna R Grimshaw, Jeremy Johnson, Sergey V Kozyrev, Alyssa J Lawler, Voichita D Marinescu, Kathleen M Morrill, Austin B Osmanski, Nicole S Paulat, BaDoi N Phan, Steven K Reilly, Daniel E Schäffer, Cynthia C Steiner, Megan Ann Supple, Aryn P Wilder, Morgan E Wirthlin, James R Xue, null null, Bruce W Birren, Steven Gazal, Robert M Hubley, Klaus-Peter Koepfli, Tomas Marques-Bonet, Wynn K Meyer, Martin T Nweeia, Pardis C Sabeti, Joshua D Kapp, Arian F A Smit, Mark S Springer, Emma C Teeling, Nishigandha Phalke, Michael Hiller, Danielle L Levesque, Harris A Lewin, William J Murphy, Arcadi Navarro, Benedict Paten, Katherine S Pollard, David A Ray, Irina Ruf, Oliver A Ryder, Andreas R Pfenning, Kerstin Lindblad-Toh, Elinor K Karlsson
Evolutionary constraint and innovation across hundreds of placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Harvinder Pawar, Aigerim Rymbekova, Sebastian Cuadros-Espinoza, Xin Huang, Marc de Manuel, Tom van der Valk, Irene Lobon, Marina Alvarez-Estape, Marc Haber, Olga Dolgova, Sojung Han, Paula Esteller-Cucala, David Juan, Qasim Ayub, Ruben Bautista, Joanna L Kelley, Omar E Cornejo, Oscar Lao, Aida M Andrés, Katerina Guschanski, Benard Ssebide, Mike Cranfield, Chris Tyler-Smith, Yali Xue, Javier Prado-Martinez, Tomas Marques-Bonet, Martin Kuhlwilm
Ghost admixture in eastern gorillas. Nature ecology & evolution (2023)
Blair P Bentley, Tomás Carrasco-Valenzuela, Elisa Karen Silva Ramos, Harvinder Pawar, Larissa Souza Arantes, Alana Alexander, Shreya M Banerjee, Patrick Masterson, Martin Kuhlwilm, Martin Pippel, Jacquelyn Mountcastle, Bettina Haase, Marcela Uliano-Silva, Giulio Formenti, Kerstin Howe, William Chow, Alan Tracey, Ying Sims, Sarah Pelan, Jonathan M D Wood, Kelsey Yetsko, Justin R Perrault, Kelly Stewart, Scott R Benson, Yaniv Levy, Erica V Todd, H Bradley Shaffer, Peter Scott, Brian T Henen, Robert W Murphy, David W Mohr, Alan F Scott, David J Duffy, Neil J Gemmell, Alexander Suh, Sylke Winkler, Françoise Thibaud-Nissen, Mariana F Nery, Tomas Marques-Bonet, Agostinho Antunes, Yaron Tikochinski, Peter H Dutton, Olivier Fedrigo, Eugene W Myers, Erich D Jarvis, Camila J Mazzoni, Lisa M Komoroske
Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories. Proceedings of the National Academy of Sciences of the United States of America 120 (7) (2023)
Yong Shao, Long Zhou, Fang Li, Lan Zhao, Bao-Lin Zhang, Feng Shao, Jia-Wei Chen, Chun-Yan Chen, Xupeng Bi, Xiao-Lin Zhuang, Hong-Liang Zhu, Jiang Hu, Zongyi Sun, Xin Li, De-Peng Wang, Iker Rivas-González, Sheng Wang, Yun-Mei Wang, Wu Chen, Gang Li, Hui-Meng Lu, Yang Liu, Lukas F K Kuderna, Kyle Kai-How Farh, Peng-Fei Fan, Li Yu, Ming Li, Zhi-Jin Liu, George P Tiley, Anne D Yoder, Christian Roos, Takashi Hayakawa, Tomas Marques-Bonet, Jeffrey Rogers, Peter D Stenson, David N Cooper, Mikkel Heide Schierup, Yong-Gang Yao, Ya-Ping Zhang, Wen Wang, Xiao-Guang Qi, Guo-Jie Zhang, Dong-Dong Wu
Phylogenomic analyses provide insights into primate evolution. Science (New York, N.Y.) 380 (6648) (2023)
Blair P Bentley, Tomás Carrasco-Valenzuela, Elisa Karen Silva Ramos, Harvinder Pawar, Larissa Souza Arantes, Alana Alexander, Shreya M Banerjee, Patrick Masterson, Martin Kuhlwilm, Martin Pippel, Jacquelyn Mountcastle, Bettina Haase, Marcela Uliano-Silva, Giulio Formenti, Kerstin Howe, William Chow, Alan Tracey, Ying Sims, Sarah Pelan, Jonathan M D Wood, Kelsey Yetsko, Justin R Perrault, Kelly Stewart, Scott R Benson, Yaniv Levy, Erica V Todd, H Bradley Shaffer, Peter Scott, Brian T Henen, Robert W Murphy, David W Mohr, Alan F Scott, David J Duffy, Neil J Gemmell, Alexander Suh, Sylke Winkler, Françoise Thibaud-Nissen, Mariana F Nery, Tomas Marques-Bonet, Agostinho Antunes, Yaron Tikochinski, Peter H Dutton, Olivier Fedrigo, Eugene W Myers, Erich D Jarvis, Camila J Mazzoni, Lisa M Komoroske
Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories. Proceedings of the National Academy of Sciences of the United States of America 120 (7) (2023)
Lara Urban, Albert Perlas, Olga Francino, Joan Martí-Carreras, Brenda A Muga, Jenniffer W Mwangi, Laura M Boykin, Jo-Ann L Stanton, Amanda Black, Nick Waipara, Claudia Fontsere, David A Eccles, Harika Urel, Tim Reska, Hernán E Morales, Marc Palmada-Flores, Tomas Marques-Bonet, Mrinalini Watsa, Zane Libke, Gideon Erkenswick, Cock Van Oosterhout
Real-time genomics for One Health. Molecular systems biology (2023)
Paula Esteller-Cucala, Marc Palmada-Flores, Lukas F K Kuderna, Claudia Fontsere, Aitor Serres-Armero, Marc Dabad, María Torralvo, Armida Faella, Luis Ferrández-Peral, Laia Llovera, Òscar Fornas, Eva Julià, Erika Ramírez, Irene González, Jochen Hecht, Esther Lizano, David Juan, Tomas Marques-Bonet
Y chromosome sequence and epigenomic reconstruction across human populations. Communications biology 6 (1) (2023)
Lukas F K Kuderna, Jacob C Ulirsch, Sabrina Rashid, Mohamed Ameen, Laksshman Sundaram, Glenn Hickey, Anthony J Cox, Hong Gao, Arvind Kumar, François Aguet, Matthew J Christmas, Hiram Clawson, Maximilian Haeussler, Mareike C Janiak, Martin Kuhlwilm, Joseph D Orkin, Thomas Bataillon, Shivakumara Manu, Alejandro Valenzuela, Juraj Bergman, Marjolaine Rousselle, Felipe Ennes Silva, Lidia Agueda, Julie Marie Blanc, Marta Gut, Dorien de Vries, Ian B Goodhead, R Alan Harris, Muthuswamy Raveendran, Axel Jensen, Idriss S Chuma, Julie E Horvath, Christina Hvilsom, David Juan, Peter Frandsen, Joshua G Schraiber, Fabiano R de Melo, Fabrício Bertuol, Hazel Byrne, Iracilda Sampaio, Izeni Pires Farias, João Valsecchi do Amaral, Malu Messias, Maria N F da Silva, Mihir Trivedi, Rogerio Rossi, Tomas Hrbek, Nicole Andriaholinirina, Clément J Rabarivola, Alphonse Zaramody, Clifford J Jolly, Jane Phillips-Conroy, Gregory K Wilkerson, Christian Abee, Joe H Simmons, Eduardo Fernández-Duque, Sree Kanthaswamy, Fekadu Shiferaw, Dong-Dong Wu, Long Zhou, Yong Shao, Guojie Zhang, Julius D Keyyu, Sascha Knauf, Minh D Le, Esther Lizano, Stefan Merker, Arcadi Navarro, Tilo Nadler, Chiea Chuen Khor, Jessica Lee, Patrick Boon-Ooi Tan, Weng Khong Lim, Andrew C Kitchener, Dietmar Zinner, Ivo Glynne Gut, Amanda Dawn Melin, Katerina Guschanski, Mikkel Heide Schierup, Robin M D Beck, Ioannis Karakikes, Kevin C Wang, Govindhaswamy Umapathy, Christian Roos, Jean Phillipe Boubli, Adam C Siepel, Anshul Kundaje, Benedict Paten, Kerstin Lindblad-Toh, Jeffrey Rogers, Tomas Marques-Bonet, Kyle Kai-How Farh
Identification of constrained sequence elements across 239 primate genomes. Nature (2023)
Hong Gao, Tobias Hamp, Jeffrey Ede, Joshua G Schraiber, Jeremy F McRae, Moriel H Singer-Berk, Yanshen Yang, Anastasia S D Dietrich, Petko P Fiziev, Lukas F K Kuderna, Laksshman Sundaram, Yibing Wu, Aashish N Adhikari, Yair Field, Chen Chen, Serafim Batzoglou, François Aguet, Gabrielle Lemire, Rebecca Reimers, Daniel J Balick, Mareike C Janiak, Martin Kuhlwilm, Joseph D Orkin, Shivakumara Manu, Alejandro Valenzuela, Juraj Bergman, Marjolaine Rousselle, Felipe Ennes Silva, Lidia Agueda, Julie Marie Blanc, Marta Gut, Dorien de Vries, Ian B Goodhead, Ronald Alan Harris, Muthuswamy Raveendran, Axel Jensen, Idrissa S Chuma, Julie E Horvath, Christina Hvilsom, David Juan, Peter Frandsen, Fabiano Rodrigues de Melo, Fabrício Bertuol, Hazel Byrne, Iracilda Sampaio, Izeni Pires Farias, João Valsecchi do Amaral, Mariluce Rezende Messias, Maria N F da Silva, Mihir Trivedi, Rogério Vieira Rossi, Tomas Hrbek, Nicole Andriaholinirina, Clément J Rabarivola, Alphonse Zaramody, Clifford J Jolly, Jane E Phillips-Conroy, Gregory K Wilkerson, Christian Abee, Joe H Simmons, Eduardo Fernández-Duque, Sree Kanthaswamy, Fekadu Shiferaw, Dong-Dong Wu, Long Zhou, Yong Shao, Guo-Jie Zhang, Julius D Keyyu, Sascha Knauf, Quyen Hanh Do, Esther Lizano, Stefan Merker, Arcadi Navarro, Thomas Bataillon, Tilo Nadler, Chiea Chuen Khor, Jessica Lee, Patrick Boon-Ooi Tan, Weng Khong Lim, Andrew C Kitchener, Dietmar Zinner, Ivo Glynne Gut, Amanda Dawn Melin, Katerina Guschanski, Mikkel Heide Schierup, Robin M D Beck, Govindhaswamy Umapathy, Christian Roos, Jean Phillipe Boubli, Monkol Lek, Shamil R Sunyaev, Anne H O'Donnell-Luria, Michael J Bamshad, Jinbo Xu, Jeffrey Rogers, Tomas Marques-Bonet, Kyle Kai-How Farh
The landscape of tolerated genetic variation in humans and primates. Science (New York, N.Y.) 380 (6648) (2023)
Blair P Bentley, Tomás Carrasco-Valenzuela, Elisa Karen Silva Ramos, Harvinder Pawar, Larissa Souza Arantes, Alana Alexander, Shreya M Banerjee, Patrick Masterson, Martin Kuhlwilm, Martin Pippel, Jacquelyn Mountcastle, Bettina Haase, Marcela Uliano-Silva, Giulio Formenti, Kerstin Howe, William Chow, Alan Tracey, Ying Sims, Sarah Pelan, Jonathan M D Wood, Kelsey Yetsko, Justin R Perrault, Kelly Stewart, Scott R Benson, Yaniv Levy, Erica V Todd, H Bradley Shaffer, Peter Scott, Brian T Henen, Robert W Murphy, David W Mohr, Alan F Scott, David J Duffy, Neil J Gemmell, Alexander Suh, Sylke Winkler, Françoise Thibaud-Nissen, Mariana F Nery, Tomas Marques-Bonet, Agostinho Antunes, Yaron Tikochinski, Peter H Dutton, Olivier Fedrigo, Eugene W Myers, Erich D Jarvis, Camila J Mazzoni, Lisa M Komoroske
Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories. Proceedings of the National Academy of Sciences of the United States of America 120 (7) (2023)
Aryn P Wilder, Megan Ann Supple, Ayshwarya Subramanian, Anish Mudide, Ross Swofford, Aitor Serres-Armero, Cynthia C Steiner, Klaus-Peter Koepfli, Diane P Genereux, Elinor K Karlsson, Kerstin Lindblad-Toh, Tomas Marques-Bonet, Violeta Munoz Fuentes, Kathleen Foley, Wynn K Meyer, null null, Oliver A Ryder, Joshua D Kapp, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Bruce W Birren, Kevin R Bredemeyer, Ana M Breit, Matthew J Christmas, Hiram Clawson, Joana Damas, Federica Di Palma, Mark Diekhans, Michael X Dong, Eduardo Eizirik, Kaili Fan, Cornelia Fanter, Nicole M Foley, Karin Forsberg-Nilsson, Carlos J Garcia, John Gatesy, Steven Gazal, Diane P Genereux, Linda Goodman, Jenna Grimshaw, Michaela K Halsey, Andrew J Harris, Glenn Hickey, Michael Hiller, Allyson G Hindle, Robert M Hubley, Graham M Hughes, Jeremy Johnson, David Juan, Irene M Kaplow, Elinor K Karlsson, Kathleen C Keough, Bogdan Kirilenko, Klaus-Peter Koepfli, Jennifer M Korstian, Amanda Kowalczyk, Sergey V Kozyrev, Alyssa J Lawler, Colleen Lawless, Thomas Lehmann, Danielle L Levesque, Harris A Lewin, Xue Li, Abigail Lind, Kerstin Lindblad-Toh, Ava Mackay-Smith, Voichita D Marinescu, Tomas Marques-Bonet, Victor C Mason, Jennifer R S Meadows, Wynn K Meyer, Jill E Moore, Lucas R Moreira, Diana D Moreno-Santillan, Kathleen M Morrill, Gerard Muntané, William J Murphy, Arcadi Navarro, Martin Nweeia, Sylvia Ortmann, Austin Osmanski, Benedict Paten, Nicole S Paulat, Andreas R Pfenning, BaDoi N Phan, Katherine S Pollard, Henry E Pratt, David A Ray, Steven K Reilly, Jeb R Rosen, Irina Ruf, Louise Ryan, Oliver A Ryder, Pardis C Sabeti, Daniel E Schäffer, Aitor Serres, Beth Shapiro, Arian F A Smit, Mark Springer, Chaitanya Srinivasan, Cynthia Steiner, Jessica M Storer, Kevin A M Sullivan, Patrick F Sullivan, Elisabeth Sundström, Megan A Supple, Ross Swofford, Joy-El Talbot, Emma Teeling, Jason Turner-Maier, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Chao Wang, Juehan Wang, Zhiping Weng, Aryn P Wilder, Morgan E Wirthlin, James R Xue, Xiaomeng Zhang
The contribution of historical processes to contemporary extinction risk in placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Blair P Bentley, Tomás Carrasco-Valenzuela, Elisa Karen Silva Ramos, Harvinder Pawar, Larissa Souza Arantes, Alana Alexander, Shreya M Banerjee, Patrick Masterson, Martin Kuhlwilm, Martin Pippel, Jacquelyn Mountcastle, Bettina Haase, Marcela Uliano-Silva, Giulio Formenti, Kerstin Howe, William Chow, Alan Tracey, Ying Sims, Sarah Pelan, Jonathan M D Wood, Kelsey Yetsko, Justin R Perrault, Kelly Stewart, Scott R Benson, Yaniv Levy, Erica V Todd, H Bradley Shaffer, Peter Scott, Brian T Henen, Robert W Murphy, David W Mohr, Alan F Scott, David J Duffy, Neil J Gemmell, Alexander Suh, Sylke Winkler, Françoise Thibaud-Nissen, Mariana F Nery, Tomas Marques-Bonet, Agostinho Antunes, Yaron Tikochinski, Peter H Dutton, Olivier Fedrigo, Eugene W Myers, Erich D Jarvis, Camila J Mazzoni, Lisa M Komoroske
Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories. Proceedings of the National Academy of Sciences of the United States of America 120 (7) (2023)
Matthew J Christmas, Irene M Kaplow, Diane P Genereux, Michael X Dong, Graham M Hughes, Xue Li, Patrick F Sullivan, Allyson G Hindle, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Ana M Breit, Mark E Diekhans, Cornelia Fanter, Nicole M Foley, Daniel B Goodman, Linda Goodman, Kathleen C Keough, Bogdan M Kirilenko, Amanda Kowalczyk, Colleen Lawless, Abigail L Lind, Jennifer R S Meadows, Lucas R Moreira, Ruby W Redlich, Louise Ryan, Ross Swofford, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Ashley R Brown, Joana Damas, Kaili Fan, John Gatesy, Jenna R Grimshaw, Jeremy Johnson, Sergey V Kozyrev, Alyssa J Lawler, Voichita D Marinescu, Kathleen M Morrill, Austin B Osmanski, Nicole S Paulat, BaDoi N Phan, Steven K Reilly, Daniel E Schäffer, Cynthia C Steiner, Megan Ann Supple, Aryn P Wilder, Morgan E Wirthlin, James R Xue, null null, Bruce W Birren, Steven Gazal, Robert M Hubley, Klaus-Peter Koepfli, Tomas Marques-Bonet, Wynn K Meyer, Martin T Nweeia, Pardis C Sabeti, Joshua D Kapp, Arian F A Smit, Mark S Springer, Emma C Teeling, Nishigandha Phalke, Michael Hiller, Danielle L Levesque, Harris A Lewin, William J Murphy, Arcadi Navarro, Benedict Paten, Katherine S Pollard, David A Ray, Irina Ruf, Oliver A Ryder, Andreas R Pfenning, Kerstin Lindblad-Toh, Elinor K Karlsson, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Bruce W Birren, Kevin R Bredemeyer, Ana M Breit, Matthew J Christmas, Hiram Clawson, Joana Damas, Federica Di Palma, Mark Diekhans, Michael X Dong, Eduardo Eizirik, Kaili Fan, Cornelia Fanter, Nicole M Foley, Karin Forsberg-Nilsson, Carlos J Garcia, John Gatesy, Steven Gazal, Diane P Genereux, Linda Goodman, Jenna Grimshaw, Michaela K Halsey, Andrew J Harris, Glenn Hickey, Michael Hiller, Allyson G Hindle, Robert M Hubley, Graham M Hughes, Jeremy Johnson, David Juan, Irene M Kaplow, Elinor K Karlsson, Kathleen C Keough, Bogdan Kirilenko, Klaus-Peter Koepfli, Jennifer M Korstian, Amanda Kowalczyk, Sergey V Kozyrev, Alyssa J Lawler, Colleen Lawless, Thomas Lehmann, Danielle L Levesque, Harris A Lewin, Xue Li, Abigail Lind, Kerstin Lindblad-Toh, Ava Mackay-Smith, Voichita D Marinescu, Tomas Marques-Bonet, Victor C Mason, Jennifer R S Meadows, Wynn K Meyer, Jill E Moore, Lucas R Moreira, Diana D Moreno-Santillan, Kathleen M Morrill, Gerard Muntané, William J Murphy, Arcadi Navarro, Martin Nweeia, Sylvia Ortmann, Austin Osmanski, Benedict Paten, Nicole S Paulat, Andreas R Pfenning, BaDoi N Phan, Katherine S Pollard, Henry E Pratt, David A Ray, Steven K Reilly, Jeb R Rosen, Irina Ruf, Louise Ryan, Oliver A Ryder, Pardis C Sabeti, Daniel E Schäffer, Aitor Serres, Beth Shapiro, Arian F A Smit, Mark Springer, Chaitanya Srinivasan, Cynthia Steiner, Jessica M Storer, Kevin A M Sullivan, Patrick F Sullivan, Elisabeth Sundström, Megan A Supple, Ross Swofford, Joy-El Talbot, Emma Teeling, Jason Turner-Maier, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Chao Wang, Juehan Wang, Zhiping Weng, Aryn P Wilder, Morgan E Wirthlin, James R Xue, Xiaomeng Zhang
Evolutionary constraint and innovation across hundreds of placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Matthew J Christmas, Irene M Kaplow, Diane P Genereux, Michael X Dong, Graham M Hughes, Xue Li, Patrick F Sullivan, Allyson G Hindle, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Ana M Breit, Mark E Diekhans, Cornelia Fanter, Nicole M Foley, Daniel B Goodman, Linda Goodman, Kathleen C Keough, Bogdan M Kirilenko, Amanda Kowalczyk, Colleen Lawless, Abigail L Lind, Jennifer R S Meadows, Lucas R Moreira, Ruby W Redlich, Louise Ryan, Ross Swofford, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Ashley R Brown, Joana Damas, Kaili Fan, John Gatesy, Jenna R Grimshaw, Jeremy Johnson, Sergey V Kozyrev, Alyssa J Lawler, Voichita D Marinescu, Kathleen M Morrill, Austin B Osmanski, Nicole S Paulat, BaDoi N Phan, Steven K Reilly, Daniel E Schäffer, Cynthia C Steiner, Megan Ann Supple, Aryn P Wilder, Morgan E Wirthlin, James R Xue, null null, Bruce W Birren, Steven Gazal, Robert M Hubley, Klaus-Peter Koepfli, Tomas Marques-Bonet, Wynn K Meyer, Martin T Nweeia, Pardis C Sabeti, Joshua D Kapp, Arian F A Smit, Mark S Springer, Emma C Teeling, Nishigandha Phalke, Michael Hiller, Danielle L Levesque, Harris A Lewin, William J Murphy, Arcadi Navarro, Benedict Paten, Katherine S Pollard, David A Ray, Irina Ruf, Oliver A Ryder, Andreas R Pfenning, Kerstin Lindblad-Toh, Elinor K Karlsson, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Bruce W Birren, Kevin R Bredemeyer, Ana M Breit, Matthew J Christmas, Hiram Clawson, Joana Damas, Federica Di Palma, Mark Diekhans, Michael X Dong, Eduardo Eizirik, Kaili Fan, Cornelia Fanter, Nicole M Foley, Karin Forsberg-Nilsson, Carlos J Garcia, John Gatesy, Steven Gazal, Diane P Genereux, Linda Goodman, Jenna Grimshaw, Michaela K Halsey, Andrew J Harris, Glenn Hickey, Michael Hiller, Allyson G Hindle, Robert M Hubley, Graham M Hughes, Jeremy Johnson, David Juan, Irene M Kaplow, Elinor K Karlsson, Kathleen C Keough, Bogdan Kirilenko, Klaus-Peter Koepfli, Jennifer M Korstian, Amanda Kowalczyk, Sergey V Kozyrev, Alyssa J Lawler, Colleen Lawless, Thomas Lehmann, Danielle L Levesque, Harris A Lewin, Xue Li, Abigail Lind, Kerstin Lindblad-Toh, Ava Mackay-Smith, Voichita D Marinescu, Tomas Marques-Bonet, Victor C Mason, Jennifer R S Meadows, Wynn K Meyer, Jill E Moore, Lucas R Moreira, Diana D Moreno-Santillan, Kathleen M Morrill, Gerard Muntané, William J Murphy, Arcadi Navarro, Martin Nweeia, Sylvia Ortmann, Austin Osmanski, Benedict Paten, Nicole S Paulat, Andreas R Pfenning, BaDoi N Phan, Katherine S Pollard, Henry E Pratt, David A Ray, Steven K Reilly, Jeb R Rosen, Irina Ruf, Louise Ryan, Oliver A Ryder, Pardis C Sabeti, Daniel E Schäffer, Aitor Serres, Beth Shapiro, Arian F A Smit, Mark Springer, Chaitanya Srinivasan, Cynthia Steiner, Jessica M Storer, Kevin A M Sullivan, Patrick F Sullivan, Elisabeth Sundström, Megan A Supple, Ross Swofford, Joy-El Talbot, Emma Teeling, Jason Turner-Maier, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Chao Wang, Juehan Wang, Zhiping Weng, Aryn P Wilder, Morgan E Wirthlin, James R Xue, Xiaomeng Zhang
Evolutionary constraint and innovation across hundreds of placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Aryn P Wilder, Megan Ann Supple, Ayshwarya Subramanian, Anish Mudide, Ross Swofford, Aitor Serres-Armero, Cynthia C Steiner, Klaus-Peter Koepfli, Diane P Genereux, Elinor K Karlsson, Kerstin Lindblad-Toh, Tomas Marques-Bonet, Violeta Munoz Fuentes, Kathleen Foley, Wynn K Meyer, null null, Oliver A Ryder, Joshua D Kapp, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Bruce W Birren, Kevin R Bredemeyer, Ana M Breit, Matthew J Christmas, Hiram Clawson, Joana Damas, Federica Di Palma, Mark Diekhans, Michael X Dong, Eduardo Eizirik, Kaili Fan, Cornelia Fanter, Nicole M Foley, Karin Forsberg-Nilsson, Carlos J Garcia, John Gatesy, Steven Gazal, Diane P Genereux, Linda Goodman, Jenna Grimshaw, Michaela K Halsey, Andrew J Harris, Glenn Hickey, Michael Hiller, Allyson G Hindle, Robert M Hubley, Graham M Hughes, Jeremy Johnson, David Juan, Irene M Kaplow, Elinor K Karlsson, Kathleen C Keough, Bogdan Kirilenko, Klaus-Peter Koepfli, Jennifer M Korstian, Amanda Kowalczyk, Sergey V Kozyrev, Alyssa J Lawler, Colleen Lawless, Thomas Lehmann, Danielle L Levesque, Harris A Lewin, Xue Li, Abigail Lind, Kerstin Lindblad-Toh, Ava Mackay-Smith, Voichita D Marinescu, Tomas Marques-Bonet, Victor C Mason, Jennifer R S Meadows, Wynn K Meyer, Jill E Moore, Lucas R Moreira, Diana D Moreno-Santillan, Kathleen M Morrill, Gerard Muntané, William J Murphy, Arcadi Navarro, Martin Nweeia, Sylvia Ortmann, Austin Osmanski, Benedict Paten, Nicole S Paulat, Andreas R Pfenning, BaDoi N Phan, Katherine S Pollard, Henry E Pratt, David A Ray, Steven K Reilly, Jeb R Rosen, Irina Ruf, Louise Ryan, Oliver A Ryder, Pardis C Sabeti, Daniel E Schäffer, Aitor Serres, Beth Shapiro, Arian F A Smit, Mark Springer, Chaitanya Srinivasan, Cynthia Steiner, Jessica M Storer, Kevin A M Sullivan, Patrick F Sullivan, Elisabeth Sundström, Megan A Supple, Ross Swofford, Joy-El Talbot, Emma Teeling, Jason Turner-Maier, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Chao Wang, Juehan Wang, Zhiping Weng, Aryn P Wilder, Morgan E Wirthlin, James R Xue, Xiaomeng Zhang
The contribution of historical processes to contemporary extinction risk in placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Bao-Lin Zhang, Wu Chen, Zefu Wang, Wei Pang, Meng-Ting Luo, Sheng Wang, Yong Shao, Wen-Qiang He, Yuan Deng, Long Zhou, Jiawei Chen, Min-Min Yang, Yajiang Wu, Lu Wang, Hugo Fernández-Bellon, Sandra Molloy, Hélène Meunier, Fanélie Wanert, Lukas F K Kuderna, Tomas Marques-Bonet, Christian Roos, Xiao-Guang Qi, Ming Li, Zhijin Liu, Mikkel Heide Schierup, David N Cooper, Jian-Quan Liu, Yong-Tang Zheng, Guo-Jie Zhang, Dong-Dong Wu
Comparative genomics reveals the hybrid origin of a macaque group. Science advances 9 (22) (2023)
Aryn P Wilder, Megan Ann Supple, Ayshwarya Subramanian, Anish Mudide, Ross Swofford, Aitor Serres-Armero, Cynthia C Steiner, Klaus-Peter Koepfli, Diane P Genereux, Elinor K Karlsson, Kerstin Lindblad-Toh, Tomas Marques-Bonet, Violeta Munoz Fuentes, Kathleen Foley, Wynn K Meyer, null null, Oliver A Ryder, Joshua D Kapp
The contribution of historical processes to contemporary extinction risk in placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Delphine Larivière, Linelle Abueg, Nadolina Brajuka, Cristóbal Gallardo-Alba, Bjoern Andreas Gruening, Byung June Ko, Alexander Ostrovsky, Marc Palmada-Flores, Brandon D Pickett, Keon Rabbani, Jennifer R Balacco, Mark J P Chaisson, Haoyu Cheng, Joanna Collins, Alexandra Denisova, Olivier Fedrigo, Guido Roberto Gallo, Alice Maria Giani, Grenville MacDonald Gooder, Nivesh Jain, Cassidy Johnson, Heebal Kim, Chul Lee, Tomas Marques-Bonet, Brian O'Toole, Arang Rhie, Simona Secomandi, Marcella Sozzoni, Tatiana Tilley, Marcela Uliano-Silva, Marius van den Beek, Robert M Waterhouse, Adam M Phillippy, Erich D Jarvis, Michael C Schatz, Anton Nekrutenko, Giulio Formenti
Scalable, accessible, and reproducible reference genome assembly and evaluation in Galaxy. bioRxiv : the preprint server for biology (2023)
Aryn P Wilder, Megan Ann Supple, Ayshwarya Subramanian, Anish Mudide, Ross Swofford, Aitor Serres-Armero, Cynthia C Steiner, Klaus-Peter Koepfli, Diane P Genereux, Elinor K Karlsson, Kerstin Lindblad-Toh, Tomas Marques-Bonet, Violeta Munoz Fuentes, Kathleen Foley, Wynn K Meyer, null null, Oliver A Ryder, Joshua D Kapp, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Bruce W Birren, Kevin R Bredemeyer, Ana M Breit, Matthew J Christmas, Hiram Clawson, Joana Damas, Federica Di Palma, Mark Diekhans, Michael X Dong, Eduardo Eizirik, Kaili Fan, Cornelia Fanter, Nicole M Foley, Karin Forsberg-Nilsson, Carlos J Garcia, John Gatesy, Steven Gazal, Diane P Genereux, Linda Goodman, Jenna Grimshaw, Michaela K Halsey, Andrew J Harris, Glenn Hickey, Michael Hiller, Allyson G Hindle, Robert M Hubley, Graham M Hughes, Jeremy Johnson, David Juan, Irene M Kaplow, Elinor K Karlsson, Kathleen C Keough, Bogdan Kirilenko, Klaus-Peter Koepfli, Jennifer M Korstian, Amanda Kowalczyk, Sergey V Kozyrev, Alyssa J Lawler, Colleen Lawless, Thomas Lehmann, Danielle L Levesque, Harris A Lewin, Xue Li, Abigail Lind, Kerstin Lindblad-Toh, Ava Mackay-Smith, Voichita D Marinescu, Tomas Marques-Bonet, Victor C Mason, Jennifer R S Meadows, Wynn K Meyer, Jill E Moore, Lucas R Moreira, Diana D Moreno-Santillan, Kathleen M Morrill, Gerard Muntané, William J Murphy, Arcadi Navarro, Martin Nweeia, Sylvia Ortmann, Austin Osmanski, Benedict Paten, Nicole S Paulat, Andreas R Pfenning, BaDoi N Phan, Katherine S Pollard, Henry E Pratt, David A Ray, Steven K Reilly, Jeb R Rosen, Irina Ruf, Louise Ryan, Oliver A Ryder, Pardis C Sabeti, Daniel E Schäffer, Aitor Serres, Beth Shapiro, Arian F A Smit, Mark Springer, Chaitanya Srinivasan, Cynthia Steiner, Jessica M Storer, Kevin A M Sullivan, Patrick F Sullivan, Elisabeth Sundström, Megan A Supple, Ross Swofford, Joy-El Talbot, Emma Teeling, Jason Turner-Maier, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Chao Wang, Juehan Wang, Zhiping Weng, Aryn P Wilder, Morgan E Wirthlin, James R Xue, Xiaomeng Zhang
The contribution of historical processes to contemporary extinction risk in placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Kathleen M Giacomini, Sook Wah Yee, Luis Ferrández-Peral, Pol Alentorn, Claudia Fontsere, Merve Ceylan, Megan Koleske, Niklas Handin, Virginia Artegoitia, Giovanni Lara, Huan-Chieh Chien, Xujia Zhou, Jacques Dainat, Arthur O Zalevsky, Andrej Sali, Colin Brand, Anthony Capra, Per Artursson, John W Newman, Tomas Marques-Bonet
Illuminating the Function of the Orphan Transporter, SLC22A10 in Humans and Other Primates. Research square (2023)
Matthew J Christmas, Irene M Kaplow, Diane P Genereux, Michael X Dong, Graham M Hughes, Xue Li, Patrick F Sullivan, Allyson G Hindle, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Ana M Breit, Mark E Diekhans, Cornelia Fanter, Nicole M Foley, Daniel B Goodman, Linda Goodman, Kathleen C Keough, Bogdan M Kirilenko, Amanda Kowalczyk, Colleen Lawless, Abigail L Lind, Jennifer R S Meadows, Lucas R Moreira, Ruby W Redlich, Louise Ryan, Ross Swofford, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Ashley R Brown, Joana Damas, Kaili Fan, John Gatesy, Jenna R Grimshaw, Jeremy Johnson, Sergey V Kozyrev, Alyssa J Lawler, Voichita D Marinescu, Kathleen M Morrill, Austin B Osmanski, Nicole S Paulat, BaDoi N Phan, Steven K Reilly, Daniel E Schäffer, Cynthia C Steiner, Megan Ann Supple, Aryn P Wilder, Morgan E Wirthlin, James R Xue, null null, Bruce W Birren, Steven Gazal, Robert M Hubley, Klaus-Peter Koepfli, Tomas Marques-Bonet, Wynn K Meyer, Martin T Nweeia, Pardis C Sabeti, Joshua D Kapp, Arian F A Smit, Mark S Springer, Emma C Teeling, Nishigandha Phalke, Michael Hiller, Danielle L Levesque, Harris A Lewin, William J Murphy, Arcadi Navarro, Benedict Paten, Katherine S Pollard, David A Ray, Irina Ruf, Oliver A Ryder, Andreas R Pfenning, Kerstin Lindblad-Toh, Elinor K Karlsson, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Bruce W Birren, Kevin R Bredemeyer, Ana M Breit, Matthew J Christmas, Hiram Clawson, Joana Damas, Federica Di Palma, Mark Diekhans, Michael X Dong, Eduardo Eizirik, Kaili Fan, Cornelia Fanter, Nicole M Foley, Karin Forsberg-Nilsson, Carlos J Garcia, John Gatesy, Steven Gazal, Diane P Genereux, Linda Goodman, Jenna Grimshaw, Michaela K Halsey, Andrew J Harris, Glenn Hickey, Michael Hiller, Allyson G Hindle, Robert M Hubley, Graham M Hughes, Jeremy Johnson, David Juan, Irene M Kaplow, Elinor K Karlsson, Kathleen C Keough, Bogdan Kirilenko, Klaus-Peter Koepfli, Jennifer M Korstian, Amanda Kowalczyk, Sergey V Kozyrev, Alyssa J Lawler, Colleen Lawless, Thomas Lehmann, Danielle L Levesque, Harris A Lewin, Xue Li, Abigail Lind, Kerstin Lindblad-Toh, Ava Mackay-Smith, Voichita D Marinescu, Tomas Marques-Bonet, Victor C Mason, Jennifer R S Meadows, Wynn K Meyer, Jill E Moore, Lucas R Moreira, Diana D Moreno-Santillan, Kathleen M Morrill, Gerard Muntané, William J Murphy, Arcadi Navarro, Martin Nweeia, Sylvia Ortmann, Austin Osmanski, Benedict Paten, Nicole S Paulat, Andreas R Pfenning, BaDoi N Phan, Katherine S Pollard, Henry E Pratt, David A Ray, Steven K Reilly, Jeb R Rosen, Irina Ruf, Louise Ryan, Oliver A Ryder, Pardis C Sabeti, Daniel E Schäffer, Aitor Serres, Beth Shapiro, Arian F A Smit, Mark Springer, Chaitanya Srinivasan, Cynthia Steiner, Jessica M Storer, Kevin A M Sullivan, Patrick F Sullivan, Elisabeth Sundström, Megan A Supple, Ross Swofford, Joy-El Talbot, Emma Teeling, Jason Turner-Maier, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Chao Wang, Juehan Wang, Zhiping Weng, Aryn P Wilder, Morgan E Wirthlin, James R Xue, Xiaomeng Zhang
Evolutionary constraint and innovation across hundreds of placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Matthew J Christmas, Irene M Kaplow, Diane P Genereux, Michael X Dong, Graham M Hughes, Xue Li, Patrick F Sullivan, Allyson G Hindle, Gregory Andrews, Joel C Armstrong, Matteo Bianchi, Ana M Breit, Mark E Diekhans, Cornelia Fanter, Nicole M Foley, Daniel B Goodman, Linda Goodman, Kathleen C Keough, Bogdan M Kirilenko, Amanda Kowalczyk, Colleen Lawless, Abigail L Lind, Jennifer R S Meadows, Lucas R Moreira, Ruby W Redlich, Louise Ryan, Ross Swofford, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Ashley R Brown, Joana Damas, Kaili Fan, John Gatesy, Jenna R Grimshaw, Jeremy Johnson, Sergey V Kozyrev, Alyssa J Lawler, Voichita D Marinescu, Kathleen M Morrill, Austin B Osmanski, Nicole S Paulat, BaDoi N Phan, Steven K Reilly, Daniel E Schäffer, Cynthia C Steiner, Megan Ann Supple, Aryn P Wilder, Morgan E Wirthlin, James R Xue, null null, Bruce W Birren, Steven Gazal, Robert M Hubley, Klaus-Peter Koepfli, Tomas Marques-Bonet, Wynn K Meyer, Martin T Nweeia, Pardis C Sabeti, Joshua D Kapp, Arian F A Smit, Mark S Springer, Emma C Teeling, Nishigandha Phalke, Michael Hiller, Danielle L Levesque, Harris A Lewin, William J Murphy, Arcadi Navarro, Benedict Paten, Katherine S Pollard, David A Ray, Irina Ruf, Oliver A Ryder, Andreas R Pfenning, Kerstin Lindblad-Toh, Elinor K Karlsson
Evolutionary constraint and innovation across hundreds of placental mammals. Science (New York, N.Y.) 380 (6643) (2023)
Blair P Bentley, Tomás Carrasco-Valenzuela, Elisa Karen Silva Ramos, Harvinder Pawar, Larissa Souza Arantes, Alana Alexander, Shreya M Banerjee, Patrick Masterson, Martin Kuhlwilm, Martin Pippel, Jacquelyn Mountcastle, Bettina Haase, Marcela Uliano-Silva, Giulio Formenti, Kerstin Howe, William Chow, Alan Tracey, Ying Sims, Sarah Pelan, Jonathan M D Wood, Kelsey Yetsko, Justin R Perrault, Kelly Stewart, Scott R Benson, Yaniv Levy, Erica V Todd, H Bradley Shaffer, Peter Scott, Brian T Henen, Robert W Murphy, David W Mohr, Alan F Scott, David J Duffy, Neil J Gemmell, Alexander Suh, Sylke Winkler, Françoise Thibaud-Nissen, Mariana F Nery, Tomas Marques-Bonet, Agostinho Antunes, Yaron Tikochinski, Peter H Dutton, Olivier Fedrigo, Eugene W Myers, Erich D Jarvis, Camila J Mazzoni, Lisa M Komoroske
Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories. Proceedings of the National Academy of Sciences of the United States of America 120 (7) (2023)
Lukas F K Kuderna, Hong Gao, Mareike C Janiak, Martin Kuhlwilm, Joseph D Orkin, Thomas Bataillon, Shivakumara Manu, Alejandro Valenzuela, Juraj Bergman, Marjolaine Rousselle, Felipe Ennes Silva, Lidia Agueda, Julie Marie Blanc, Marta Gut, Dorien de Vries, Ian B Goodhead, Ronald Alan Harris, Muthuswamy Raveendran, Axel Jensen, Idrissa S Chuma, Julie E Horvath, Christina Hvilsom, David Juan, Peter Frandsen, Joshua G Schraiber, Fabiano Rodrigues de Melo, Fabrício Bertuol, Hazel Byrne, Iracilda Sampaio, Izeni Pires Farias, João Valsecchi do Amaral, Mariluce Rezende Messias, Maria N F da Silva, Mihir Trivedi, Rogério Vieira Rossi, Tomas Hrbek, Nicole Andriaholinirina, Clément J Rabarivola, Alphonse Zaramody, Clifford J Jolly, Jane E Phillips-Conroy, Gregory K Wilkerson, Christian Abee, Joe H Simmons, Eduardo Fernández-Duque, Sree Kanthaswamy, Fekadu Shiferaw, Dong-Dong Wu, Long Zhou, Yong Shao, Guo-Jie Zhang, Julius D Keyyu, Sascha Knauf, Quyen Hanh Do, Esther Lizano, Stefan Merker, Arcadi Navarro, Tilo Nadler, Chiea Chuen Khor, Jessica Lee, Patrick Boon-Ooi Tan, Weng Khong Lim, Andrew C Kitchener, Dietmar Zinner, Ivo Glynne Gut, Amanda Dawn Melin, Katerina Guschanski, Mikkel Heide Schierup, Robin M D Beck, Govindhaswamy Umapathy, Christian Roos, Jean Phillipe Boubli, Jeffrey Rogers, Kyle Kai-How Farh, Tomas Marques-Bonet
A global catalog of whole-genome diversity from 233 primate species. Science (New York, N.Y.) 380 (6648) (2023)
Erik F Sørensen, Ronald Alan Harris, Liye Zhang, Muthuswamy Raveendran, Lukas F K Kuderna, Jerilyn A Walker, Jessica M Storer, Martin Kuhlwilm, Claudia Fontsere, Lakshmi Seshadri, Christina M Bergey, Andrew S Burrell, Juraj Bergman, Jane E Phillips-Conroy, Fekadu Shiferaw, Kenneth L Chiou, Idrissa S Chuma, Julius D Keyyu, Julia Fischer, Marie-Claude Gingras, Sejal Salvi, Harshavardhan Doddapaneni, Mikkel Heide Schierup, Mark A Batzer, Clifford J Jolly, Sascha Knauf, Dietmar Zinner, Kyle Kai-How Farh, Tomas Marques-Bonet, Kasper Munch, Christian Roos, Jeffrey Rogers
Genome-wide coancestry reveals details of ancient and recent male-driven reticulation in baboons. Science (New York, N.Y.) 380 (6648) (2023)
Marc Palmada-Flores, Joseph D Orkin, Bettina Haase, Jacquelyn Mountcastle, Mads Frost Bertelsen, Olivier Fedrigo, Lukas F K Kuderna, Erich D Jarvis, Tomas Marques-Bonet
A high-quality, long-read genome assembly of the endangered ring-tailed lemur (Lemur catta). GigaScience 11 (2022)
Mareike C Janiak, Felipe Ennes Silva, Robin M D Beck, Dorien de Vries, Lukas F K Kuderna, Nicole S Torosin, Amanda Dawn Melin, Tomas Marques-Bonet, Ian B Goodhead, Mariluce Messias, Maria N F da Silva, Iracilda Sampaio, Izeni Pires Farias, Rogerio Rossi, Fabiano R de Melo, João Valsecchi, Tomas Hrbek, Jean Phillipe Boubli
Two hundred and five newly assembled mitogenomes provide mixed evidence for rivers as drivers of speciation for Amazonian primates. Molecular ecology 31 (14) (2022)
Florent Murat, Noe Mbengue, Sofia Boeg Winge, Timo Trefzer, Evgeny Leushkin, Mari Sepp, Margarida Cardoso-Moreira, Julia Schmidt, Celine Schneider, Katharina Mößinger, Thoomke Brüning, Francesco Lamanna, Meritxell Riera Belles, Christian Conrad, Ivanela Kondova, Ronald Bontrop, Rüdiger Behr, Philipp Khaitovich, Svante Pääbo, Tomas Marques-Bonet, Frank Grützner, Kristian Almstrup, Mikkel Heide Schierup, Henrick Kaessmann
The molecular evolution of spermatogenesis across mammals. Nature (2022)
Florent Murat, Noe Mbengue, Sofia Boeg Winge, Timo Trefzer, Evgeny Leushkin, Mari Sepp, Margarida Cardoso-Moreira, Julia Schmidt, Celine Schneider, Katharina Mößinger, Thoomke Brüning, Francesco Lamanna, Meritxell Riera Belles, Christian Conrad, Ivanela Kondova, Ronald Bontrop, Rüdiger Behr, Philipp Khaitovich, Svante Pääbo, Tomas Marques-Bonet, Frank Grützner, Kristian Almstrup, Mikkel Heide Schierup, Henrick Kaessmann
The molecular evolution of spermatogenesis across mammals. Nature 613 (7943) (2022)
Florent Murat, Noe Mbengue, Sofia Boeg Winge, Timo Trefzer, Evgeny Leushkin, Mari Sepp, Margarida Cardoso-Moreira, Julia Schmidt, Celine Schneider, Katharina Mößinger, Thoomke Brüning, Francesco Lamanna, Meritxell Riera Belles, Christian Conrad, Ivanela Kondova, Ronald Bontrop, Rüdiger Behr, Philipp Khaitovich, Svante Pääbo, Tomas Marques-Bonet, Frank Grützner, Kristian Almstrup, Mikkel Heide Schierup, Henrick Kaessmann
The molecular evolution of spermatogenesis across mammals. Nature (2022)
Martin Kuhlwilm, Claudia Fontsere, Sojung Han, Marina Alvarez-Estape, Tomas Marques-Bonet
HuConTest: Testing Human Contamination in Great Ape Samples. Genome biology and evolution 13 (6) (2022)
Florent Murat, Noe Mbengue, Sofia Boeg Winge, Timo Trefzer, Evgeny Leushkin, Mari Sepp, Margarida Cardoso-Moreira, Julia Schmidt, Celine Schneider, Katharina Mößinger, Thoomke Brüning, Francesco Lamanna, Meritxell Riera Belles, Christian Conrad, Ivanela Kondova, Ronald Bontrop, Rüdiger Behr, Philipp Khaitovich, Svante Pääbo, Tomas Marques-Bonet, Frank Grützner, Kristian Almstrup, Mikkel Heide Schierup, Henrick Kaessmann
The molecular evolution of spermatogenesis across mammals. Nature 613 (7943) (2022)
Florent Murat, Noe Mbengue, Sofia Boeg Winge, Timo Trefzer, Evgeny Leushkin, Mari Sepp, Margarida Cardoso-Moreira, Julia Schmidt, Celine Schneider, Katharina Mößinger, Thoomke Brüning, Francesco Lamanna, Meritxell Riera Belles, Christian Conrad, Ivanela Kondova, Ronald Bontrop, Rüdiger Behr, Philipp Khaitovich, Svante Pääbo, Tomas Marques-Bonet, Frank Grützner, Kristian Almstrup, Mikkel Heide Schierup, Henrick Kaessmann
The molecular evolution of spermatogenesis across mammals. Nature 613 (7943) (2022)
Florent Murat, Noe Mbengue, Sofia Boeg Winge, Timo Trefzer, Evgeny Leushkin, Mari Sepp, Margarida Cardoso-Moreira, Julia Schmidt, Celine Schneider, Katharina Mößinger, Thoomke Brüning, Francesco Lamanna, Meritxell Riera Belles, Christian Conrad, Ivanela Kondova, Ronald Bontrop, Rüdiger Behr, Philipp Khaitovich, Svante Pääbo, Tomas Marques-Bonet, Frank Grützner, Kristian Almstrup, Mikkel Heide Schierup, Henrick Kaessmann
The molecular evolution of spermatogenesis across mammals. Nature 613 (7943) (2022)
Mara K N Lawniczak, Richard Durbin, Paul Flicek, Kerstin Lindblad-Toh, Xiaofeng Wei, John M Archibald, William J Baker, Katherine Belov, Mark L Blaxter, Tomas Marques-Bonet, Anna K Childers, Jonathan A Coddington, Keith A Crandall, Andrew J Crawford, Robert P Davey, Federica Di Palma, Qi Fang, Wilfried Haerty, Neil Hall, Katharina J Hoff, Kerstin Howe, Erich D Jarvis, Warren E Johnson, Rebecca N Johnson, Paul Julian Kersey, Xin Liu, Jose Victor Lopez, Eugene W Myers, Olga Vinnere Pettersson, Adam M Phillippy, Monica F Poelchau, Kim D Pruitt, Arang Rhie, Juan Carlos Castilla-Rubio, Sunil Kumar Sahu, Nicholas A Salmon, Pamela S Soltis, David Swarbreck, Françoise Thibaud-Nissen, Sibo Wang, Jill L Wegrzyn, Guo-Jie Zhang, He Zhang, Harris A Lewin, Stephen Richards
Standards recommendations for the Earth BioGenome Project. Proceedings of the National Academy of Sciences of the United States of America 119 (4) (2022)
Florent Murat, Noe Mbengue, Sofia Boeg Winge, Timo Trefzer, Evgeny Leushkin, Mari Sepp, Margarida Cardoso-Moreira, Julia Schmidt, Celine Schneider, Katharina Mößinger, Thoomke Brüning, Francesco Lamanna, Meritxell Riera Belles, Christian Conrad, Ivanela Kondova, Ronald Bontrop, Rüdiger Behr, Philipp Khaitovich, Svante Pääbo, Tomas Marques-Bonet, Frank Grützner, Kristian Almstrup, Mikkel Heide Schierup, Henrick Kaessmann
The molecular evolution of spermatogenesis across mammals. Nature 613 (7943) (2022)
Florent Murat, Noe Mbengue, Sofia Boeg Winge, Timo Trefzer, Evgeny Leushkin, Mari Sepp, Margarida Cardoso-Moreira, Julia Schmidt, Celine Schneider, Katharina Mößinger, Thoomke Brüning, Francesco Lamanna, Meritxell Riera Belles, Christian Conrad, Ivanela Kondova, Ronald Bontrop, Rüdiger Behr, Philipp Khaitovich, Svante Pääbo, Tomas Marques-Bonet, Frank Grützner, Kristian Almstrup, Mikkel Heide Schierup, Henrick Kaessmann
The molecular evolution of spermatogenesis across mammals. Nature 613 (7943) (2022)
Irune Ruiz-Gartzia, Esther Lizano, Tomas Marques-Bonet, Joanna L Kelley
Recovering the genomes hidden in museum wet collections. Molecular ecology resources 22 (6) (2022)
Harris A Lewin, Stephen Richards, Erez Lieberman Aiden, Miguel L Allende, John M Archibald, Miklós Bálint, Katharine B Barker, Bridget Baumgartner, Katherine Belov, Giorgio Bertorelle, Mark L Blaxter, Jing Cai, Nicolette D Caperello, Keith Carlson, Juan Carlos Castilla-Rubio, Shu-Miaw Chaw, Lei Chen, Anna K Childers, Jonathan A Coddington, Dalia A Conde, Montserrat Corominas, Keith A Crandall, Andrew J Crawford, Federica DiPalma, Richard Durbin, ThankGod E Ebenezer, Scott V Edwards, Olivier Fedrigo, Paul Flicek, Giulio Formenti, Richard A Gibbs, Marcus Thomas Pius Gilbert, Melissa M Goldstein, Jennifer Ann Marshall Graves, Henry T Greely, Igor V Grigoriev, Kevin J Hackett, Neil Hall, David Haussler, Kristofer M Helgen, Carolyn J Hogg, Sachiko Isobe, Kjetill Sigurd Jakobsen, Axel Janke, Erich D Jarvis, Warren E Johnson, Steven J M Jones, Elinor K Karlsson, Paul J Kersey, Jin-Hyoung Kim, W John Kress, Shigehiro Kuraku, Mara K N Lawniczak, James H Leebens-Mack, Xueyan Li, Kerstin Lindblad-Toh, Xin Liu, Jose V Lopez, Tomas Marques-Bonet, Sophie Mazard, Jonna A K Mazet, Camila J Mazzoni, Eugene W Myers, Rachel J O'Neill, Sadye Paez, Hyun Park, Gene E Robinson, Cristina Roquet, Oliver A Ryder, Jamal S M Sabir, H Bradley Shaffer, Timothy M Shank, Jacob S Sherkow, Pamela S Soltis, Boping Tang, Leho Tedersoo, Marcela Uliano-Silva, Kun Wang, Xiaofeng Wei, Regina Wetzer, Julia L Wilson, Xun Xu, Huanming Yang, Anne D Yoder, Guo-Jie Zhang
The Earth BioGenome Project 2020: Starting the clock. Proceedings of the National Academy of Sciences of the United States of America 119 (4) (2022)
Florent Murat, Noe Mbengue, Sofia Boeg Winge, Timo Trefzer, Evgeny Leushkin, Mari Sepp, Margarida Cardoso-Moreira, Julia Schmidt, Celine Schneider, Katharina Mößinger, Thoomke Brüning, Francesco Lamanna, Meritxell Riera Belles, Christian Conrad, Ivanela Kondova, Ronald Bontrop, Rüdiger Behr, Philipp Khaitovich, Svante Pääbo, Tomas Marques-Bonet, Frank Grützner, Kristian Almstrup, Mikkel Heide Schierup, Henrick Kaessmann
The molecular evolution of spermatogenesis across mammals. Nature 613 (7943) (2022)
Raquel Garcia Perez, Paula Esteller-Cucala, Glòria Mas, Irene Lobón, Valerio Di Carlo, Meritxell Riera, Martin Kuhlwilm, Arcadi Navarro, Antoine Blancher, Luciano Di Croce, José Luis Gómez-Skarmeta, David Juan, Tomas Marques-Bonet
Epigenomic profiling of primate lymphoblastoid cell lines reveals the evolutionary patterns of epigenetic activities in gene regulatory architectures. Nature communications 12 (1) (2021)
Aitor Serres-Armero, Brian W Davis, Inna S Povolotskaya, Carlos Morcillo-Suarez, Jocelyn Plassais, David Juan, Elaine A Ostrander, Tomas Marques-Bonet
Copy number variation underlies complex phenotypes in domestic dog breeds and other canids. Genome research 31 (5) (2021)
Joseph D Orkin, Michael J Montague, Daniela Tejada-Martinez, Marc de Manuel, Javier Del Campo, Saul Cheves Hernandez, Anthony Di Fiore, Claudia Fontsere, Jason A Hodgson, Mareike C Janiak, Lukas F K Kuderna, Esther Lizano, Maria Pia Martin, Yoshihito Niimura, George H Perry, Carmen Soto Valverde, Jia Tang, Wesley C Warren, João Pedro de Magalhães, Shoji Kawamura, Tomas Marques-Bonet, Roman J Krawetz, Amanda Dawn Melin
The genomics of ecological flexibility, large brains, and long lives in capuchin monkeys revealed with fecalFACS. Proceedings of the National Academy of Sciences of the United States of America 118 (7) (2021)
Amanda Dawn Melin, Joseph D Orkin, Mareike C Janiak, Alejandro Valenzuela, Lukas F K Kuderna, Frank Marrone, Hasinala Ramangason, Julie E Horvath, Christian Roos, Andrew C Kitchener, Chiea Chuen Khor, Weng Khong Lim, Jessica G H Lee, Patrick Tan, Govindhaswamy Umapathy, Muthuswamy Raveendran, Ronald Alan Harris, Ivo Glynne Gut, Marta Gut, Esther Lizano, Tilo Nadler, Dietmar Zinner, Minh D Le, Shivakumara Manu, Clément J Rabarivola, Alphonse Zaramody, Nicole Andriaholinirina, Steig E Johnson, Erich D Jarvis, Olivier Fedrigo, Dongdong Wu, Guojie Zhang, Kyle Kai-How Farh, Jeffrey Rogers, Tomas Marques-Bonet, Arcadi Navarro, David Juan, Paramjit S Arora, James P Higham
Variation in predicted COVID-19 risk among lemurs and lorises. American journal of primatology 83 (6) (2021)
Arang Rhie, Shane A McCarthy, Olivier Fedrigo, Joana Damas, Giulio Formenti, Sergey Koren, Marcela Uliano-Silva, William Chow, Arkarachai Fungtammasan, Juwan Kim, Chul Lee, Byung June Ko, Mark Chaisson, Gregory L Gedman, Lindsey J Cantin, Françoise Thibaud-Nissen, Leanne Haggerty, Iliana Bista, Michelle Smith, Bettina Haase, Jacquelyn Mountcastle, Sylke Winkler, Sadye Paez, Jason Howard, Sonja C Vernes, Tanya M Lama, Frank Grützner, Wesley C Warren, Christopher N Balakrishnan, David W Burt, Julia M George, Matthew T Biegler, David Iorns, Andrew Digby, Daryl Eason, Bruce C Robertson, Taylor Edwards, Mark Wilkinson, George Turner, Axel Meyer, Andreas F Kautt, Paolo Franchini, Harry William Detrich, Hannes Svardal, Maximilian Wagner, Gavin J P Naylor, Martin Pippel, Milan Malinsky, Mark Mooney, Maria Simbirsky, Brett T Hannigan, Trevor Pesout, Marlys Houck, Ann Misuraca, Sarah B Kingan, Richard J Hall, Zev Kronenberg, Ivan Sović, Christopher Dunn, Zemin Ning, Alex Hastie, Joyce Lee, Siddarth Selvaraj, Richard E Green, Nicholas H Putnam, Ivo Glynne Gut, Jay Ghurye, Erik Garrison, Ying Sims, Joanna Collins, Sarah Pelan, James Torrance, Alan Tracey, Jonathan Wood, Robel E Dagnew, Dengfeng Guan, Sarah E London, David F Clayton, Claudio V Mello, Samantha R Friedrich, Peter V Lovell, Ekaterina Osipova, Farooq O Al-Ajli, Simona Secomandi, Heebal Kim, Constantina Theofanopoulou, Michael Hiller, Yang Zhou, Robert S Harris, Kateryna D Makova, Paul Medvedev, Jinna Hoffman, Patrick Masterson, Karen Clark, Fergal J Martin, Kevin Howe, Paul Flicek, Brian P Walenz, Woori Kwak, Hiram Clawson, Mark E Diekhans, Luis Nassar, Benedict Paten, Robert H S Kraus, Andrew J Crawford, Marcus Thomas Pius Gilbert, Guo-Jie Zhang, Byrappa Venkatesh, Robert W Murphy, Klaus-Peter Koepfli, Joshua D Kapp, Warren E Johnson, Federica Di Palma, Tomas Marques-Bonet, Emma C Teeling, Tandy Warnow, Jennifer Marshall Graves, Oliver A Ryder, David Haussler, Stephen J O'Brien, Jonas Korlach, Harris A Lewin, Kerstin Howe, Eugene W Myers, Richard Durbin, Adam M Phillippy, Erich D Jarvis
Towards complete and error-free genome assemblies of all vertebrate species. Nature 592 (7856) (2021)
Fátima Sánchez Barreiro, Shyam Gopalakrishnan, Jazmín Ramos-Madrigal, Michael V Westbury, Marc de Manuel, Ashot Margaryan, Marta M Ciucani, Filipe G Vieira, Yannis Patramanis, Daniela C Kalthoff, Zena Timmons, Thomas Sicheritz-Pontén, Love Dalén, Oliver A Ryder, Guojie Zhang, Tomas Marques-Bonet, Yoshan Moodley, M Thomas P Gilbert
Historical population declines prompted significant genomic erosion in the northern and southern white rhinoceros (Ceratotherium simum). Molecular ecology 30 (23) (2021)
Pere Renom, Toni de-Dios, Sergi Civit, Laia Llovera, Alejandro Sánchez Gracia, Esther Lizano, Juan Carlos Rando, Tomas Marques-Bonet, Gael J Kergoat, Isaac Casanovas-Vilar, Carles Lalueza-Fox
Genetic data from the extinct giant rat from Tenerife (Canary Islands) points to a recent divergence from mainland relatives. Biology letters 17 (12) (2021)
Frido Welker, Jazmín Ramos-Madrigal, Petra Gutenbrunner, Meaghan Mackie, Shivani Tiwary, Rosa Rakownikow Jersie-Christensen, Cristina Chiva, Marc R Dickinson, Martin Kuhlwilm, Marc de Manuel, Pere Gelabert, María Martinón-Torres, Ann Margvelashvili, Juan Luis Arsuaga, Eudald Carbonell, Tomas Marques-Bonet, Kirsty Penkman, Eduard Sabidó, Juergen Cox, Jesper Velgaard Olsen, David Lordkipanidze, Fernando Racimo, Carles Lalueza-Fox, José María Bermúdez de Castro, Eske Willerslev, Enrico Cappellini
The dental proteome of Homo antecessor. Nature 580 (7802) (2020)
José María Heredia-Genestar, Tomas Marques-Bonet, David Juan, Arcadi Navarro
Extreme differences between human germline and tumor mutation densities are driven by ancestral human-specific deviations. Nature communications 11 (1) (2020)
Lauren E Blake, Julien Roux, Irene Hernando-Herraez, Nicholas E Banovich, Raquel Garcia Perez, Chiaowen Joyce Hsiao, Ittai E Eres, Claudia Cuevas, Tomas Marques-Bonet, Yoav Gilad
A comparison of gene expression and DNA methylation patterns across tissues and species. Genome research 30 (2) (2020)
Mikkel-Holger S Sinding, Shyam Gopalakrishnan, Jazmin Ramos-Madrigal, Marc de Manuel, Vladimir V Pitulko, Lukas F K Kuderna, Tatiana R Feuerborn, Laurent Alain François Frantz, Filipe Garrett Vieira, Jonas Niemann, Jose A Samaniego Castruita, Christian Carøe, Emilie U Andersen-Ranberg, Peter D Jordan, Elena Y Pavlova, Pavel A Nikolskiy, Aleksei K Kasparov, Varvara V Ivanova, Eske Willerslev, Pontus Skoglund, Merete Fredholm, Sanne Eline Wennerberg, Mads Peter Heide-Jørgensen, Rune Dietz, Christian Sonne, Morten Meldgaard, Love Dalen, Greger Larson, Bent Petersen, Thomas Arn Hansen, Lutz Bachmann, Øystein Wiig, Tomas Marques-Bonet, Anders Johannes Hansen, Marcus Thomas Pius Gilbert
Arctic-adapted dogs emerged at the Pleistocene-Holocene transition. Science (New York, N.Y.) 368 (6498) (2020)
Marina Brasó-Vives, Inna S Povolotskaya, Diego A Hartasánchez, Xavier Farre Ramon, Marcos Fernandez-Callejo, Muthuswamy Raveendran, Ronald Alan Harris, Douglas L Rosene, Belen Lorente-Galdos, Arcadi Navarro, Tomas Marques-Bonet, Jeffrey Rogers, David Juan
Copy number variants and fixed duplications among 198 rhesus macaques (Macaca mulatta). PLoS genetics 16 (5) (2020)
David Gokhman, Malka Nissim-Rafinia, Lily Agranat-Tamir, Genevieve Housman, Raquel García-Pérez, Esther Lizano, Olivia Cheronet, Swapan Mallick, Maria A Nieves-Colón, Heng Li, Songül Alpaslan-Roodenberg, Mario Novak, Hongcang Gu, Jason M Osinski, Manuel Ferrando-Bernal, Pere Gelabert, Iddi Lipende, Deus Mjungu, Ivanela Kondova, Ronald Bontrop, Ottmar Kullmer, Gerhard Weber, Tal Shahar, Mona Dvir-Ginzberg, Marina Faerman, Ellen E Quillen, Alexander Meissner, Yonatan Lahav, Leonid Kandel, Meir Liebergall, María E Prada, Julio Manuel Vidal Encinas, Richard M Gronostajski, Anne C Stone, Benjamin Yakir, Carles Lalueza-Fox, Ron Pinhasi, David Reich, Tomas Marques-Bonet, Eran Meshorer, Liran Carmel
Differential DNA methylation of vocal and facial anatomy genes in modern humans. Nature communications 11 (1) (2020)
Soren Besenbacher, Christina Hvilsom, Tomas Marques-Bonet, Thomas Mailund, Mikkel Heide Schierup
Direct estimation of mutations in great apes reconciles phylogenetic dating. Nature ecology & evolution 3 (2) (2019)
Jeffrey Rogers, Muthuswamy Raveendran, Ronald Alan Harris, Thomas Mailund, Kalle Leppälä, Georgios Athanasiadis, Mikkel Heide Schierup, Jade Cheng, Kasper Munch, Jerilyn A Walker, Miriam K Konkel, Vallmer Jordan, Cody J Steely, Thomas O Beckstrom, Christina M Bergey, Andrew Burrell, Dominik Schrempf, Angela Noll, Maximillian Kothe, Gisela H Kopp, Yue Liu, Shwetha Murali, Konstantinos Billis, Fergal J Martin, Matthieu Muffato, Laura A Cox, James Else, Todd Disotell, Donna M Muzny, Jane E Phillips-Conroy, Bronwen L Aken, Evan E Eichler, Tomas Marques-Bonet, Carolin Kosiol, Mark A Batzer, Matthew W Hahn, Jenny Tung, Dietmar Zinner, Christian Roos, Clifford J Jolly, Richard A Gibbs, Kim Carlyle Worley, null null
The comparative genomics and complex population history of Papio baboons. Science advances 5 (1) (2019)
Claudia Fontsere, Marc de Manuel, Tomas Marques-Bonet, Martin Kuhlwilm
Admixture in Mammals and How to Understand Its Functional Implications: On the Abundance of Gene Flow in Mammalian Species, Its Impact on the Genome, and Roads into a Functional Understanding. BioEssays : news and reviews in molecular, cellular and developmental biology 41 (12) (2019)
Joshua M Schmidt, Marc de Manuel, Tomas Marques-Bonet, Sergi Castellano, Aida M Andrés
The impact of genetic adaptation on chimpanzee subspecies differentiation. PLoS genetics 15 (11) (2019)
Lukas F K Kuderna, Esther Lizano, Eva Julià, Jessica Gomez-Garrido, Aitor Serres-Armero, Martin Kuhlwilm, Regina Antoni Alandes, Marina Alvarez-Estape, David Juan, Simon Charles Heath, Tyler S Alioto, Marta Gut, Ivo Gut, Mikkel Heide Schierup, Òscar Fornas, Tomas Marques-Bonet
Selective single molecule sequencing and assembly of a human Y chromosome of African origin. Nature communications 10 (1) (2019)
Martin Kuhlwilm, Sojung Han, Vitor C Sousa, Laurent Excoffier, Tomas Marques-Bonet
Ancient admixture from an extinct ape lineage into bonobos. Nature ecology & evolution 3 (6) (2019)
Manuel Solis-Moruno, Marc de Manuel, Jessica Hernandez-Rodriguez, Claudia Fontsere, Alba Gomara-Castaño, Cristina Valsera-Naranjo, Dietmar Crailsheim, Arcadi Navarro, Miquel Llorente, Laura Riera, Olga Feliu-Olleta, Tomas Marques-Bonet
Author Correction: Potential damaging mutation in LRP5 from genome sequencing of the first reported chimpanzee with the Chiari malformation. Scientific reports 8 (1) (2018)
Wesley C Warren, Raquel García-Pérez, Sen Xu, Kathrin P Lampert, Domitille Chalopin, Matthias Stöck, Laurence Loewe, Yuan Lu, Lukas F K Kuderna, Patrick Minx, Michael J Montague, Chad Tomlinson, LaDeana W Hillier, Daniel N Murphy, John Wang, Zhongwei Wang, Constantino Macías Garcia, Gregg C W Thomas, Jean-Nicolas Volff, Fabiana Farias, Bronwen Aken, Ronald B Walter, Kim D Pruitt, Tomas Marques-Bonet, Matthew W Hahn, Susanne Kneitz, Michael Lynch, Manfred Schartl
Clonal polymorphism and high heterozygosity in the celibate genome of the Amazon molly. Nature ecology & evolution 2 (4) (2018)
Marc de Manuel, Takashi Shiina, Shingo Suzuki, Nathalie Dereuddre-Bosquet, Henri-Jean Garchon, Masayuki Tanaka, Nicolas Congy-Jolivet, Alice Aarnink, Roger Le Grand, Tomas Marques-Bonet, Antoine Blancher
Whole genome sequencing in the search for genes associated with the control of SIV infection in the Mauritian macaque model. Scientific reports 8 (1) (2018)
Daniel Gómez-Sánchez, Iñigo Olalde, Natalia Sastre, Conrad Enseñat, Rafael Carrasco, Tomas Marques-Bonet, Carles Lalueza-Fox, Jennifer A Leonard, Carles Vilà, Oscar Ramírez
On the path to extinction: Inbreeding and admixture in a declining grey wolf population. Molecular ecology 27 (18) (2018)
André M M Sousa, Ying Zhu, Mary Ann Raghanti, Robert R Kitchen, Marco Onorati, Andrew T N Tebbenkamp, Bernardo Stutz, Kyle A Meyer, Mingfeng Li, Yuka Imamura Kawasawa, Fuchen Liu, Raquel Garcia Perez, Marta Melé, Tiago Carvalho, Mario Škarica, Forrest O Gulden, Mihovil Pletikos, Akemi Shibata, Alexa R Stephenson, Melissa K Edler, John J Ely, John D Elsworth, Tamas L Horvath, Patrick R Hof, Thomas M Hyde, Joel E Kleinman, Daniel R Weinberger, Mark Reimers, Richard P Lifton, Shrikant M Mane, James P Noonan, Matthew W State, Ed S Lein, James A Knowles, Tomas Marques-Bonet, Chet C Sherwood, Mark B Gerstein, Nenad Sestan
Molecular and cellular reorganization of neural circuits in the human lineage. Science (New York, N.Y.) 358 (6366) (2018)
Ying Zhu, André M M Sousa, Tianliuyun Gao, Mario Škarica, Mingfeng Li, Gabriel Santpere Baró, Paula Esteller-Cucala, David Juan, Luis Ferrández-Peral, Forrest O Gulden, Mo Yang, Daniel J Miller, Tomas Marques-Bonet, Yuka Imamura Kawasawa, Hongyu Zhao, Nenad Sestan
Spatiotemporal transcriptomic divergence across human and macaque brain development. Science (New York, N.Y.) 362 (6420) (2018)
Víctor Quesada, Sandra Freitas-Rodríguez, Joshua Moses Miller, José G Pérez-Silva, Zi-Feng Jiang, Washington Tapia, Olaya Santiago-Fernández, Diana Campos-Iglesias, Lukas F K Kuderna, Maud Quinzin, Miguel G Álvarez, Dido Carrero, Luciano B Beheregaray, James P Gibbs, Ylenia Chiari, Scott Glaberman, Claudio Ciofi, Miguel Araujo-Voces, Pablo Mayoral, Javier R Arango, Isaac Tamargo-Gómez, David Roiz-Valle, María Pascual-Torner, Benjamin R Evans, Danielle L Edwards, Ryan C Garrick, Michael A Russello, Nikos Poulakakis, Stephen J Gaughran, Danny O Rueda, Gabriel Bretones, Tomas Marques-Bonet, Kevin P White, Adalgisa Caccone, Carlos López-Otín
Giant tortoise genomes provide insights into longevity and age-related disease. Nature ecology & evolution 3 (1) (2018)
Manuel Solis-Moruno, Marc de Manuel, Jessica Hernandez-Rodriguez, Claudia Fontsere, Alba Gomara-Castaño, Cristina Valsera-Naranjo, Dietmar Crailsheim, Arcadi Navarro, Miquel Llorente, Laura Riera, Olga Feliu-Olleta, Tomas Marques-Bonet
Potential damaging mutation in LRP5 from genome sequencing of the first reported chimpanzee with the Chiari malformation. Scientific reports 7 (1) (2017)
Nicky Staes, Chet C Sherwood, Katharine Wright, Marc de Manuel, Elaine E Guevara, Tomas Marques-Bonet, Michael Krützen, Michael Massiah, William D Hopkins, John J Ely, Brenda J Bradley
FOXP2 variation in great ape populations offers insight into the evolution of communication skills. Scientific reports 7 (1) (2017)
Pablo Librado, Cristina Gamba, Charleen Gaunitz, Clio Der Sarkissian, Mélanie Pruvost, Anders Albrechtsen, Antoine Fages, Naveed Khan, Mikkel Schubert, Vidhya Jagannathan, Aitor Serres-Armero, Lukas F K Kuderna, Inna S Povolotskaya, Andaine Seguin-Orlando, Sébastien Lepetz, Markus Neuditschko, Catherine Thèves, Saleh Alquraishi, Ahmed H Alfarhan, Khaled Al-Rasheid, Stefan Rieder, Zainolla Samashev, Henri-Paul Francfort, Norbert Benecke, Michael Hofreiter, Arne Ludwig, Christine Keyser, Tomas Marques-Bonet, Bertrand Ludes, Rozenn Colleter, Tosso Leeb, Eske Willerslev, Ludovic Orlando
Ancient genomic changes associated with domestication of the horse. Science (New York, N.Y.) 356 (6336) (2017)
Marta Sánchez-Delgado, Franck Court, Enrique Vidal, Jose V Medrano, Ana Monteagudo, Alex Martin-Trujillo, Chiharu Tayama, Isabel Iglesias Platas, Ivanela Kondova, Ronald Bontrop, Maria Eugenia Poo-Llanillo, Tomas Marques-Bonet, Kazuhiko Nakabayashi, Carlos Simón, David Monk
Human Oocyte-Derived Methylation Differences Persist in the Placenta Revealing Widespread Transient Imprinting. PLoS genetics 12 (11) (2016)

Tomas Marques-Bonet.css-eqlu8i{font-size:small;padding-left:4px;} (Tomas Marques Bonet, Tomás Marquès-Bonet, Tomàs Marquès-Bonet)

Publication Activity (10 Years)

Top Topics

Top Venues

Tomas Marques-Bonet (Tomas Marques Bonet, Tomás Marquès-Bonet, Tomàs Marquès-Bonet)