William J Rowell (William Rowell)

ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 26

Top Venues

Nature biotechnology

American journal of medical genetics. Part A

Bioinformatics (Oxford, England)

PloS one

Pacific Biosciences Inc

University of North Carolina at Chapel Hill (BSC)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Pacific Biosciences Inc Feb 27 2017

United States

Sr Scientist, Bioinformatics :: AppsLab

Expression Analysis Inc Sep 21 2015 - Feb 21 2017

United States

Scientific Programmer :: Bioinformatics

Howard Hughes Medical Institute Janelia Farm Research Campus

United States

Research Specialist

Education History

University of North Carolina at Chapel Hill

United States

BSC :: Biology

Publications

Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
James M Holt, Christopher T Saunders, William J Rowell, Zev N Kronenberg, Aaron M Wenger, Michael A Eberle
HiPhase: jointly phasing small, structural, and tandem repeat variants from HiFi sequencing. Bioinformatics (Oxford, England) 40 (2) (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
James M Holt, Christopher T Saunders, William J Rowell, Zev N Kronenberg, Aaron M Wenger, Michael A Eberle
HiPhase: jointly phasing small, structural, and tandem repeat variants from HiFi sequencing. Bioinformatics (Oxford, England) 40 (2) (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
James M Holt, Christopher T Saunders, William J Rowell, Zev N Kronenberg, Aaron M Wenger, Michael A Eberle
HiPhase: jointly phasing small, structural, and tandem repeat variants from HiFi sequencing. Bioinformatics (Oxford, England) 40 (2) (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
James M Holt, Christopher T Saunders, William J Rowell, Zev N Kronenberg, Aaron M Wenger, Michael A Eberle
HiPhase: jointly phasing small, structural, and tandem repeat variants from HiFi sequencing. Bioinformatics (Oxford, England) 40 (2) (2024)
Warren A Cheung, Adam F Johnson, William J Rowell, Emily Farrow, Richard J Hall, Ana S A Cohen, John C Means, Tricia N Zion, Daniel M Portik, Christopher T Saunders, Boryana Koseva, Chengpeng Bi, Tina K Truong, Carl Schwendinger-Schreck, Byunggil Yoo, Jeffrey J Johnston, Margaret Gibson, Gilad Evrony, William B Rizzo, Isabelle Thiffault, Scott T Younger, Tom Curran, Aaron M Wenger, Elin Grundberg, Tomi Pastinen
Direct haplotype-resolved 5-base HiFi sequencing for genome-wide profiling of hypermethylation outliers in a rare disease cohort. Nature communications 14 (1) (2023)
Giulia F Del Gobbo, Xueqi Wang, Madeline Couse, Layla Mackay, Claire Goldsmith, Aren Elizabeth Marshall, Yijing Liang, Christine Lambert, Siyuan Zhang, Harsharan Dhillon, Cairbre Fanslow, William J Rowell, null null, Christian R Marshall, Kristin D Kernohan, Kym M Boycott
Long-read genome sequencing reveals a novel intronic retroelement insertion in NR5A1 associated with 46,XY differences of sexual development. American journal of medical genetics. Part A 194 (5) (2023)
Giulia F Del Gobbo, Xueqi Wang, Madeline Couse, Layla Mackay, Claire Goldsmith, Aren Elizabeth Marshall, Yijing Liang, Christine Lambert, Siyuan Zhang, Harsharan Dhillon, Cairbre Fanslow, William J Rowell, null null, Christian R Marshall, Kristin D Kernohan, Kym M Boycott
Long-read genome sequencing reveals a novel intronic retroelement insertion in NR5A1 associated with 46,XY differences of sexual development. American journal of medical genetics. Part A 194 (5) (2023)
Giulia F Del Gobbo, Xueqi Wang, Madeline Couse, Layla Mackay, Claire Goldsmith, Aren Elizabeth Marshall, Yijing Liang, Christine Lambert, Siyuan Zhang, Harsharan Dhillon, Cairbre Fanslow, William J Rowell, null null, Christian R Marshall, Kristin D Kernohan, Kym M Boycott
Long-read genome sequencing reveals a novel intronic retroelement insertion in NR5A1 associated with 46,XY differences of sexual development. American journal of medical genetics. Part A (2023)
Giulia F Del Gobbo, Xueqi Wang, Madeline Couse, Layla Mackay, Claire Goldsmith, Aren Elizabeth Marshall, Yijing Liang, Christine Lambert, Siyuan Zhang, Harsharan Dhillon, Cairbre Fanslow, William J Rowell, null null, Christian R Marshall, Kristin D Kernohan, Kym M Boycott
Long-read genome sequencing reveals a novel intronic retroelement insertion in NR5A1 associated with 46,XY differences of sexual development. American journal of medical genetics. Part A 194 (5) (2023)
Giulia F Del Gobbo, Xueqi Wang, Madeline Couse, Layla Mackay, Claire Goldsmith, Aren Elizabeth Marshall, Yijing Liang, Christine Lambert, Siyuan Zhang, Harsharan Dhillon, Cairbre Fanslow, William J Rowell, null null, Christian R Marshall, Kristin D Kernohan, Kym M Boycott
Long-read genome sequencing reveals a novel intronic retroelement insertion in NR5A1 associated with 46,XY differences of sexual development. American journal of medical genetics. Part A 194 (5) (2023)
Gunjan Baid, Daniel E Cook, Kishwar Shafin, Taedong Yun, Felipe Llinares-López, Quentin Berthet, Anastasiya Belyaeva, Armin Töpfer, Aaron M Wenger, William J Rowell, Howard Yang, Alexey Kolesnikov, Waleed Ammar, Jean-Philippe Vert, Ashish Vaswani, Cory Y McLean, Maria Nattestad, Pi-Chuan Chang, Andrew Carroll
DeepConsensus improves the accuracy of sequences with a gap-aware sequence transformer. Nature biotechnology (2022)
Justin Wagner, Nathan D Olson, Lindsay Harris, Jennifer McDaniel, Haoyu Cheng, Arkarachai Fungtammasan, Yih-Chii Hwang, Richa Gupta, Aaron M Wenger, William J Rowell, Ziad M Khan, Jesse Farek, Yiming Zhu, Aishwarya Pisupati, Medhat Mahmoud, Chunlin Xiao, Byunggil Yoo, Sayed Mohammad Ebrahim Sahraeian, Danny E Miller, David Jáspez, Jose Miguel Lorenzo-Salazar, Adrián Muñoz-Barrera, Luis Alberto Rubio-Rodríguez, Carlos Flores, Giuseppe Narzisi, Uday Shanker Evani, Wayne E Clarke, Joyce Lee, Christopher E Mason, Stephen E Lincoln, Karen H Miga, Mark T W Ebbert, Alaina Shumate, Heng Li, Chen-Shan Chin, Justin M Zook, Fritz J Sedlazeck
Curated variation benchmarks for challenging medically relevant autosomal genes. Nature biotechnology 40 (5) (2022)
Elvisa Mehinovic, Teddi Gray, Meghan Campbell, Jenny Ekholm, Aaron Wenger, William J Rowell, Ari Grudo, Jane Grimwood, Jonas Korlach, Christina Gurnett, John N Constantino, Tychele N Turner
Germline mosaicism of a missense variant in KCNC2 in a multiplex family with autism and epilepsy characterized by long-read sequencing. American journal of medical genetics. Part A 188 (7) (2022)
Pia Laine, William J Rowell, Lars Paulin, Steve Kujawa, Denise Raterman, George Mayhew, Jennifer Wendt, Daniel L Burgess, Timo Partonen, Tiina Paunio, Petri Auvinen, Jenny M Ekholm
Alu element in the RNA binding motif protein, X-linked 2 (RBMX2) gene found to be linked to bipolar disorder. PloS one 16 (12) (2021)
Maaike van der Lee, William J Rowell, Roberta Menafra, Henk-Jan Guchelaar, Jesse Joachim Swen, Seyed Yahya Anvar
Application of long-read sequencing to elucidate complex pharmacogenomic regions: a proof of principle. The pharmacogenomics journal (2021)
George W Cook, Michael G Benton, Wallace Akerley, George F Mayhew, Cynthia Moehlenkamp, Denise Raterman, Daniel L Burgess, William J Rowell, Christine Lambert, Kevin Eng, Jenny Gu, Primo Baybayan, John T Fussell, Heath D Herbold, John M O'Shea, Thomas K Varghese, Lyska L Emerson
Structural variation and its potential impact on genome instability: Novel discoveries in the EGFR landscape by long-read sequencing. PloS one 15 (1) (2020)
Chen-Shan Chin, Justin Wagner, Qiandong Zeng, Erik Garrison, Shilpa Garg, Arkarachai Fungtammasan, Mikko Rautiainen, Sergey Aganezov, Melanie Kirsche, Samantha Zarate, Michael C Schatz, Chunlin Xiao, William J Rowell, Charles Markello, Jesse Farek, Fritz J Sedlazeck, Vikas Bansal, Byunggil Yoo, Neil A Miller, Xin Zhou, Andrew Carroll, Alvaro Martinez Barrio, Marc Salit, Tobias Marschall, Alexander T Dilthey, Justin M Zook
A diploid assembly-based benchmark for variants in the major histocompatibility complex. Nature communications 11 (1) (2020)
Aaron M Wenger, Paul Peluso, William J Rowell, Pi-Chuan Chang, Richard J Hall, Gregory T Concepcion, Jana Ebler, Arkarachai Fungtammasan, Alexey Kolesnikov, Nathan D Olson, Armin Töpfer, Michael Alonge, Medhat Mahmoud, Yufeng Qian, Chen-Shan Chin, Adam M Phillippy, Michael C Schatz, Gene Myers, Mark A DePristo, Jue Ruan, Tobias Marschall, Fritz J Sedlazeck, Justin M Zook, Heng Li, Sergey Koren, Andrew Carroll, David R Rank, Michael W Hunkapiller
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome. Nature biotechnology 37 (10) (2019)

William J Rowell.css-eqlu8i{font-size:small;padding-left:4px;} (William Rowell)

Publication Activity (10 Years)

Top Topics

Top Venues

William J Rowell (William Rowell)