Victor Greiff

Loop profile Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 48

Top Venues

NPJ vaccines

mAbs

Nature computational science

GigaScience

University of Oslo

Humboldt-Universität zu Berlin (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Oslo Jan 01 2018

Norway

Associate Professor :: Department of Immunology

Eidgenössische Technische Hochschule Zürich Feb 01 2013 - Dec 31 2017

Switzerland

Postdoctoral researcher :: Department of Biosystems Science and Engineering

Education History

Humboldt-Universität zu Berlin Sep 01 2009 - Dec 31 2012

Germany

PHD :: Department of Biology

Publications

Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone, Lmar Marie Babrak, Katja Fink, Enkelejda Miho
The dengue-specific immune response and antibody identification with machine learning. NPJ vaccines 9 (1) (2024)
Mai Ha Vu, Philippe A Robert, Rahmad Akbar, Bartlomiej Swiatczak, Geir Kjetil F Sandve, Dag Trygve Truslew Haug, Victor Greiff
Linguistics-based formalization of the antibody language as a basis for antibody language models. Nature computational science 4 (6) (2024)
Habib Bashour, Eva Smorodina, Matteo Pariset, Jahn Zhong, Rahmad Akbar, Maria Chernigovskaya, Khang Lê Quý, Igor Snapkow, Puneet Rawat, Konrad Krawczyk, Geir Kjetil F Sandve, José Gutiérrez Marcos, Daniel Nakhaee-Zadeh Gutierrez, Jan Terje Andersen, Victor Greiff
Biophysical cartography of the native and human-engineered antibody landscapes quantifies the plasticity of antibody developability. Communications biology 7 (1) (2024)
Habib Bashour, Eva Smorodina, Matteo Pariset, Jahn Zhong, Rahmad Akbar, Maria Chernigovskaya, Khang Lê Quý, Igor Snapkow, Puneet Rawat, Konrad Krawczyk, Geir Kjetil F Sandve, José Gutiérrez Marcos, Daniel Nakhaee-Zadeh Gutierrez, Jan Terje Andersen, Victor Greiff
Biophysical cartography of the native and human-engineered antibody landscapes quantifies the plasticity of antibody developability. Communications biology 7 (1) (2024)
Christoffer V Sørensen, Nils Hofmann, Puneet Rawat, Frederik V Sørensen, Anne Ljungars, Victor Greiff, Andreas Hougaard Laustsen, Timothy Patrick Jenkins
ExpoSeq: simplified analysis of high-throughput sequencing data from antibody discovery campaigns. Bioinformatics advances 4 (1) (2024)
Habib Bashour, Eva Smorodina, Matteo Pariset, Jahn Zhong, Rahmad Akbar, Maria Chernigovskaya, Khang Lê Quý, Igor Snapkow, Puneet Rawat, Konrad Krawczyk, Geir Kjetil F Sandve, José Gutiérrez Marcos, Daniel Nakhaee-Zadeh Gutierrez, Jan Terje Andersen, Victor Greiff
Biophysical cartography of the native and human-engineered antibody landscapes quantifies the plasticity of antibody developability. Communications biology 7 (1) (2024)
Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone, Lmar Marie Babrak, Katja Fink, Enkelejda Miho
The dengue-specific immune response and antibody identification with machine learning. NPJ vaccines 9 (1) (2024)
Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone, Lmar Marie Babrak, Katja Fink, Enkelejda Miho
Author Correction: The dengue-specific immune response and antibody identification with machine learning. NPJ vaccines 9 (1) (2024)
Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone, Lmar Marie Babrak, Katja Fink, Enkelejda Miho
The dengue-specific immune response and antibody identification with machine learning. NPJ vaccines 9 (1) (2024)
Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone, Lmar Marie Babrak, Katja Fink, Enkelejda Miho
The dengue-specific immune response and antibody identification with machine learning. NPJ vaccines 9 (1) (2024)
Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone, Lmar Marie Babrak, Katja Fink, Enkelejda Miho
The dengue-specific immune response and antibody identification with machine learning. NPJ vaccines 9 (1) (2024)
Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone, Lmar Marie Babrak, Katja Fink, Enkelejda Miho
The dengue-specific immune response and antibody identification with machine learning. NPJ vaccines 9 (1) (2024)
Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone, Lmar Marie Babrak, Katja Fink, Enkelejda Miho
The dengue-specific immune response and antibody identification with machine learning. NPJ vaccines 9 (1) (2024)
Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone, Lmar Marie Babrak, Katja Fink, Enkelejda Miho
The dengue-specific immune response and antibody identification with machine learning. NPJ vaccines 9 (1) (2024)
Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone, Lmar Marie Babrak, Katja Fink, Enkelejda Miho
Author Correction: The dengue-specific immune response and antibody identification with machine learning. NPJ vaccines 9 (1) (2024)
Christoffer V Sørensen, Nils Hofmann, Puneet Rawat, Frederik V Sørensen, Anne Ljungars, Victor Greiff, Andreas Hougaard Laustsen, Timothy Patrick Jenkins
ExpoSeq: simplified analysis of high-throughput sequencing data from antibody discovery campaigns. Bioinformatics advances 4 (1) (2024)
Alexander J Brown, Janice White, Laura A Shaw, Jimmy Gross, Andrei Slabodkin, Ella Kushner, Victor Greiff, Jennifer Matsuda, Laurent Gapin, James Scott-Browne, John W Kappler, Philippa Marrack
MHC heterozygosity limits T cell receptor variability in CD4 T cells. Science immunology 9 (97) (2024)
Mai Ha Vu, Philippe A Robert, Rahmad Akbar, Bartlomiej Swiatczak, Geir Kjetil F Sandve, Dag Trygve Truslew Haug, Victor Greiff
Linguistics-based formalization of the antibody language as a basis for antibody language models. Nature computational science (2024)
Monica L I Fernández-Quintero, Anne Ljungars, Franz Waibl, Victor Greiff, Jan Terje Andersen, Torleif Tollefsrud Gjølberg, Timothy Patrick Jenkins, Bjørn Gunnar Rude Voldborg, Lise Marie Grav, Sandeep Kumar, Guy Georges, Hubert Kettenberger, Klaus Roman Liedl, Peter M Tessier, John McCafferty, Andreas Hougaard Laustsen
Assessing developability early in the discovery process for novel biologics. mAbs 15 (1) (2023)
Eirik Høye, Vegar Johansen Dagenborg, Annette Torgunrud, Christin Lund-Andersen, Åsmund Avdem Fretland, Susanne Lorenz, Bjørn Edwin, Eivind Hovig, Bastian Fromm, Else Marit Inderberg, Victor Greiff, Anne Hansen Ree, Norman John Carr
T cell receptor repertoire sequencing reveals chemotherapy-driven clonal expansion in colorectal liver metastases. GigaScience 12 (2023)
Tanase Timis, Jon Thor Bergthorsson, Victor Greiff, Mihai Cenariu, Diana Cenariu
Pathology and Molecular Biology of Melanoma. Current issues in molecular biology 45 (7) (2023)
Monica L I Fernández-Quintero, Anne Ljungars, Franz Waibl, Victor Greiff, Jan Terje Andersen, Torleif Tollefsrud Gjølberg, Timothy Patrick Jenkins, Bjørn Gunnar Rude Voldborg, Lise Marie Grav, Sandeep Kumar, Guy Georges, Hubert Kettenberger, Klaus Roman Liedl, Peter M Tessier, John McCafferty, Andreas Hougaard Laustsen
Assessing developability early in the discovery process for novel biologics. mAbs 15 (1) (2023)
Eirik Høye, Vegar Johansen Dagenborg, Annette Torgunrud, Christin Lund-Andersen, Åsmund Avdem Fretland, Susanne Lorenz, Bjørn Edwin, Eivind Hovig, Bastian Fromm, Else Marit Inderberg, Victor Greiff, Anne Hansen Ree, Norman John Carr
T cell receptor repertoire sequencing reveals chemotherapy-driven clonal expansion in colorectal liver metastases. GigaScience 12 (2023)
Chakravarthi Kanduri, Lonneke Scheffer, Milena Pavlović, Knut Dagestad Rand, Maria Chernigovskaya, Oz Pirvandy, Gur Yaari, Victor Greiff, Geir Kjetil F Sandve
simAIRR: simulation of adaptive immune repertoires with realistic receptor sequence sharing for benchmarking of immune state prediction methods. GigaScience 12 (2023)
Monica L I Fernández-Quintero, Anne Ljungars, Franz Waibl, Victor Greiff, Jan Terje Andersen, Torleif Tollefsrud Gjølberg, Timothy Patrick Jenkins, Bjørn Gunnar Rude Voldborg, Lise Marie Grav, Sandeep Kumar, Guy Georges, Hubert Kettenberger, Klaus Roman Liedl, Peter M Tessier, John McCafferty, Andreas Hougaard Laustsen
Assessing developability early in the discovery process for novel biologics. mAbs 15 (1) (2023)
Aina Ulvmoen, Victor Greiff, Anne G Bechensteen, Marit Inngjerdingen
NKG2A discriminates natural killer cells with a suppressed phenotype in pediatric acute leukemia. Journal of leukocyte biology (2023)
Monica L I Fernández-Quintero, Anne Ljungars, Franz Waibl, Victor Greiff, Jan Terje Andersen, Torleif Tollefsrud Gjølberg, Timothy Patrick Jenkins, Bjørn Gunnar Rude Voldborg, Lise Marie Grav, Sandeep Kumar, Guy Georges, Hubert Kettenberger, Klaus Roman Liedl, Peter M Tessier, John McCafferty, Andreas Hougaard Laustsen
Assessing developability early in the discovery process for novel biologics. mAbs 15 (1) (2023)
C Garrett Rappazzo, Monica L I Fernández-Quintero, Andreas Mayer, Nicholas C Wu, Victor Greiff, Jenna J Guthmiller
Defining and Studying B Cell Receptor and TCR Interactions. Journal of immunology (Baltimore, Md. : 1950) 211 (3) (2023)
Eirik Høye, Vegar Johansen Dagenborg, Annette Torgunrud, Christin Lund-Andersen, Åsmund Avdem Fretland, Susanne Lorenz, Bjørn Edwin, Eivind Hovig, Bastian Fromm, Else Marit Inderberg, Victor Greiff, Anne Hansen Ree, Norman John Carr
T cell receptor repertoire sequencing reveals chemotherapy-driven clonal expansion in colorectal liver metastases. GigaScience 12 (2023)
S Esmaeil Dorraji, Elin Borgen, Dario Segura-Peña, Puneet Rawat, Eva Smorodina, Claire Dunn, Victor Greiff, Nikolina Sekulić, Hege Russnes, Jon Amund Kyte
Development of a High-Affinity Antibody against the Tumor-Specific and Hyperactive 611-p95HER2 Isoform. Cancers 14 (19) (2022)
Chakravarthi Kanduri, Milena Pavlović, Lonneke Scheffer, Keshav Motwani, Maria Chernigovskaya, Victor Greiff, Geir Kjetil F Sandve
Profiling the baseline performance and limits of machine learning models for adaptive immune receptor repertoire classification. GigaScience 11 (2022)
Torbjørn Rognes, Lonneke Scheffer, Victor Greiff, Geir Kjetil F Sandve
CompAIRR: ultra-fast comparison of adaptive immune receptor repertoires by exact and approximate sequence matching. Bioinformatics (Oxford, England) 38 (17) (2022)
Rahmad Akbar, Philippe A Robert, Cédric R Weber, Michael Widrich, Robert Frank, Milena Pavlović, Lonneke Scheffer, Maria Chernigovskaya, Igor Snapkov, Andrei Slabodkin, Brij Bhushan Mehta, Enkelejda Miho, Fridtjof Lund-Johansen, Jan Terje Andersen, Sepp Hochreiter, Ingrid Hobæk Haff, Guenter Klambauer, Geir Kjetil F Sandve, Victor Greiff
In silico proof of principle of machine learning-based antibody design at unconstrained scale. mAbs 14 (1) (2022)
Jiami Han, Solène Masserey, Danielle Shlesinger, Raphael Kuhn, Chrysa Papadopoulou, Andreas Agrafiotis, Victor Kreiner, Raphael Dizerens, Kai-Lin Hong, Cédric R Weber, Victor Greiff, Annette Oxenius, Sai T Reddy, Alexander Yermanos
Echidna: integrated simulations of single-cell immune receptor repertoires and transcriptomes. Bioinformatics advances 2 (1) (2022)
Shiva Dahal-Koirala, Gabriel Balaban, Ralf Stefan Neumann, Lonneke Scheffer, Knut Erik Aslaksen Lundin, Victor Greiff, Ludvig Magne Sollid, Shuo-Wang Qiao, Geir Kjetil Sandve
TCRpower: quantifying the detection power of T-cell receptor sequencing with a novel computational pipeline calibrated by spike-in sequences. Briefings in bioinformatics 23 (2) (2022)
Geir Kjetil F Sandve, Victor Greiff
Access to ground truth at unconstrained size makes simulated data as indispensable as experimental data for bioinformatics methods development and benchmarking. Bioinformatics (Oxford, England) 38 (21) (2022)
Jiami Han, Solène Masserey, Danielle Shlesinger, Raphael Kuhn, Chrysa Papadopoulou, Andreas Agrafiotis, Victor Kreiner, Raphael Dizerens, Kai-Lin Hong, Cédric R Weber, Victor Greiff, Annette Oxenius, Sai T Reddy, Alexander Yermanos
Echidna: integrated simulations of single-cell immune receptor repertoires and transcriptomes. Bioinformatics advances 2 (1) (2022)
Philippe A Robert, Rahmad Akbar, Robert Frank, Milena Pavlović, Michael Widrich, Igor Snapkov, Andrei Slabodkin, Maria Chernigovskaya, Lonneke Scheffer, Eva Smorodina, Puneet Rawat, Brij Bhushan Mehta, Mai Ha Vu, Ingvild Frøberg Mathisen, Aurél Prósz, Krzysztof Abram, Alex Olar, Enkelejda Miho, Dag Trygve Tryslew Haug, Fridtjof Lund-Johansen, Sepp Hochreiter, Ingrid Hobæk Haff, Günter Klambauer, Geir Kjetil F Sandve, Victor Greiff
Unconstrained generation of synthetic antibody-antigen structures to guide machine learning methodology for antibody specificity prediction. Nature computational science 2 (12) (2022)
Philippe A Robert, Rahmad Akbar, Robert Frank, Milena Pavlović, Michael Widrich, Igor Snapkov, Andrei Slabodkin, Maria Chernigovskaya, Lonneke Scheffer, Eva Smorodina, Puneet Rawat, Brij Bhushan Mehta, Mai Ha Vu, Ingvild Frøberg Mathisen, Aurél Prósz, Krzysztof Abram, Alex Olar, Enkelejda Miho, Dag Trygve Tryslew Haug, Fridtjof Lund-Johansen, Sepp Hochreiter, Ingrid Hobæk Haff, Günter Klambauer, Geir Kjetil F Sandve, Victor Greiff
Unconstrained generation of synthetic antibody-antigen structures to guide machine learning methodology for antibody specificity prediction. Nature computational science 2 (12) (2022)
Rahmad Akbar, Habib Bashour, Puneet Rawat, Philippe A Robert, Eva Smorodina, Tudor-Stefan Cotet, Karine Flem-Karlsen, Robert Frank, Brij Bhushan Mehta, Mai Ha Vu, Talip Zengin, José Gutiérrez Marcos, Fridtjof Lund-Johansen, Jan Terje Andersen, Victor Greiff
Progress and challenges for the machine learning-based design of fit-for-purpose monoclonal antibodies. mAbs 14 (1) (2022)
Wiktoria Wilman, Sonia Wróbel, Weronika Bielska, Piotr Deszynski, Paweł Dudzic, Igor Jaszczyszyn, Jędrzej Kaniewski, Jakub Młokosiewicz, Anahita Rouyan, Tadeusz Satława, Sandeep Kumar, Victor Greiff, Konrad Krawczyk
Machine-designed biotherapeutics: opportunities, feasibility and advantages of deep learning in computational antibody discovery. Briefings in bioinformatics 23 (4) (2022)
Philippe A Robert, Rahmad Akbar, Robert Frank, Milena Pavlović, Michael Widrich, Igor Snapkov, Andrei Slabodkin, Maria Chernigovskaya, Lonneke Scheffer, Eva Smorodina, Puneet Rawat, Brij Bhushan Mehta, Mai Ha Vu, Ingvild Frøberg Mathisen, Aurél Prósz, Krzysztof Abram, Alex Olar, Enkelejda Miho, Dag Trygve Tryslew Haug, Fridtjof Lund-Johansen, Sepp Hochreiter, Ingrid Hobæk Haff, Günter Klambauer, Geir Kjetil F Sandve, Victor Greiff
Unconstrained generation of synthetic antibody-antigen structures to guide machine learning methodology for antibody specificity prediction. Nature computational science 2 (12) (2022)
Ivana Mikocziova, Victor Greiff, Ludvig M Sollid
Immunoglobulin germline gene variation and its impact on human disease. Genes and immunity 22 (4) (2021)
Philippe A Robert, Heike Kunze-Schumacher, Victor Greiff, Andreas Krueger
Modeling the Dynamics of T-Cell Development in the Thymus. Entropy (Basel, Switzerland) 23 (4) (2021)
Andrei Slabodkin, Maria Chernigovskaya, Ivana Mikocziova, Rahmad Akbar, Lonneke Scheffer, Milena Pavlović, Habib Bashour, Igor Snapkov, Brij Bhushan Mehta, Cédric R Weber, José Gutiérrez Marcos, Ludvig M Sollid, Ingrid Hobæk Haff, Geir Kjetil F Sandve, Philippe A Robert, Victor Greiff
Individualized VDJ recombination predisposes the available Ig sequence space. Genome research (2021)
Kerui Peng, Yana Safonova, Mikhail Shugay, Alice B Popejoy, Oscar L Rodriguez, Felix Breden, Petter Brodin, Amanda M Burkhardt, Carlos Bustamante, Van-Mai Cao-Lormeau, Martin M Corcoran, Darragh Duffy, Macarena Fuentes-Guajardo, Ricardo Fujita, Victor Greiff, Vanessa D Jönsson, Xiao Liu, Lluis Quintana-Murci, Maura Rossetti, Jianming Xie, Gur Yaari, Wei Zhang, Khalid Olajide Adekoya, Khalid O Adekoya, Rahaman A Ahmed, Wei-Chiao Chang, Clive Gray, Yusuke Nakamura, William D Lees, Purvesh Khatri, Houda Alachkar, Cathrine Scheepers, Corey T Watson, Gunilla B Karlsson Hedestam, Serghei Mangul
Diversity in immunogenomics: the value and the challenge. Nature methods 18 (6) (2021)
Raquel Bartolomé Casado, Ole J B Landsverk, Sudhir Kumar Chauhan, Lisa Richter, Danh Phung, Victor Greiff, Louise F Risnes, Ying Yao, Ralf S Neumann, Sheraz Yaqub, Ole M Øyen, Rune Horneland, Einar Martin Aandahl, Vemund Paulsen, Ludvig M Sollid, Shuo-Wang Qiao, Espen Sønderaal Bækkevold, Frode Lars Jahnsen
Resident memory CD8 T cells persist for years in human small intestine. The Journal of experimental medicine 216 (10) (2019)
Victor Greiff, Cédric R Weber, Johannes Palme, Ulrich Bodenhofer, Enkelejda Miho, Ulrike Lischetti, Sai T Reddy
Learning the High-Dimensional Immunogenomic Features That Predict Public and Private Antibody Repertoires. Journal of immunology (Baltimore, Md. : 1950) 199 (8) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Victor Greiff