Jacques Deguine

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 24

Top Topics

Ulcerative Colitis

High Throughput Sequencing

Atopic Dermatitis

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

The Journal of experimental medicine

Nature communications

Science immunology

This page only lists publications with an associated author ORCID identifier.

Publications

Jiarui Ding, John J Garber, Amiko Uchida, Ariel Lefkovith, Grace T Carter, Praveen Vimalathas, Lauren Canha, Michael Dougan, Kyle Staller, Joseph Yarze, Toni Marie Delorey, Orit Rozenblatt-Rosen, Orr Ashenberg, Daniel B Graham, Jacques Deguine, Aviv Regev, Ramnik J Xavier
An esophagus cell atlas reveals dynamic rewiring during active eosinophilic esophagitis and remission. Nature communications 15 (1) (2024)
Jiarui Ding, John J Garber, Amiko Uchida, Ariel Lefkovith, Grace T Carter, Praveen Vimalathas, Lauren Canha, Michael Dougan, Kyle Staller, Joseph Yarze, Toni Marie Delorey, Orit Rozenblatt-Rosen, Orr Ashenberg, Daniel B Graham, Jacques Deguine, Aviv Regev, Ramnik J Xavier
An esophagus cell atlas reveals dynamic rewiring during active eosinophilic esophagitis and remission. Nature communications 15 (1) (2024)
Jiarui Ding, John J Garber, Amiko Uchida, Ariel Lefkovith, Grace T Carter, Praveen Vimalathas, Lauren Canha, Michael Dougan, Kyle Staller, Joseph Yarze, Toni Marie Delorey, Orit Rozenblatt-Rosen, Orr Ashenberg, Daniel B Graham, Jacques Deguine, Aviv Regev, Ramnik J Xavier
An esophagus cell atlas reveals dynamic rewiring during active eosinophilic esophagitis and remission. Nature communications 15 (1) (2024)
Jiarui Ding, John J Garber, Amiko Uchida, Ariel Lefkovith, Grace T Carter, Praveen Vimalathas, Lauren Canha, Michael Dougan, Kyle Staller, Joseph Yarze, Toni Marie Delorey, Orit Rozenblatt-Rosen, Orr Ashenberg, Daniel B Graham, Jacques Deguine, Aviv Regev, Ramnik J Xavier
An esophagus cell atlas reveals dynamic rewiring during active eosinophilic esophagitis and remission. Nature communications 15 (1) (2024)
Jacques Deguine, Ramnik J Xavier
B cell tolerance and autoimmunity: Lessons from repertoires. The Journal of experimental medicine 221 (9) (2024)
Jiarui Ding, John J Garber, Amiko Uchida, Ariel Lefkovith, Grace T Carter, Praveen Vimalathas, Lauren Canha, Michael Dougan, Kyle Staller, Joseph Yarze, Toni Marie Delorey, Orit Rozenblatt-Rosen, Orr Ashenberg, Daniel B Graham, Jacques Deguine, Aviv Regev, Ramnik J Xavier
An esophagus cell atlas reveals dynamic rewiring during active eosinophilic esophagitis and remission. Nature communications 15 (1) (2024)
Jacques Deguine, Ramnik J Xavier
B cell tolerance and autoimmunity: Lessons from repertoires. The Journal of experimental medicine 221 (9) (2024)
Johannes F Scheid, Basak Eraslan, Andrew Hudak, Eric M Brown, Dallis Sergio, Toni Marie Delorey, Devan Phillips, Ariel Lefkovith, Alison T Jess, Lennard W Duck, Charles O Elson, Hera Vlamakis, Damian Rafal Plichta, Jacques Deguine, Ashwin N Ananthakrishnan, Daniel B Graham, Aviv Regev, Ramnik J Xavier
Remodeling of colon plasma cell repertoire within ulcerative colitis patients. The Journal of experimental medicine 220 (4) (2023)
Alina Ulezko Antonova, Silvia Lonardi, Matilde Monti, Francesco Missale, Changxu Fan, Matthew L Coates, Mattia Bugatti, Natalia Jaeger, Patrick Fernandes Rodrigues, Simone Brioschi, Tihana Trsan, José L Fachi, Khai M Nguyen, Ryan M Nunley, Daniele Moratto, Stefania Zini, Lingjia Kong, Jacques Deguine, Mark E Peeples, Ramnik J Xavier, Menna R Clatworthy, Ting Wang, Marina Cella, William Vermi, Marco Colonna
A distinct human cell type expressing MHCII and RORγt with dual characteristics of dendritic cells and type 3 innate lymphoid cells. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Jehan W Alladina, Neal P Smith, Tristan Kooistra, Kamil Slowikowski, Isabela J Kernin, Jacques Deguine, Henry L Keen, Kasidet Manakongtreecheep, Jessica Tantivit, Rod A Rahimi, Susan L Sheng, Nhan D Nguyen, Alexis M Haring, Francesca L Giacona, Lida P Hariri, Ramnik J Xavier, Andrew D Luster, Alexandra-Chloé Villani, Josalyn L Cho, Benjamin D Medoff
A human model of asthma exacerbation reveals transcriptional programs and cell circuits specific to allergic asthma. Science immunology 8 (83) (2023)
Alina Ulezko Antonova, Silvia Lonardi, Matilde Monti, Francesco Missale, Changxu Fan, Matthew L Coates, Mattia Bugatti, Natalia Jaeger, Patrick Fernandes Rodrigues, Simone Brioschi, Tihana Trsan, José L Fachi, Khai M Nguyen, Ryan M Nunley, Daniele Moratto, Stefania Zini, Lingjia Kong, Jacques Deguine, Mark E Peeples, Ramnik J Xavier, Menna R Clatworthy, Ting Wang, Marina Cella, William Vermi, Marco Colonna
A distinct human cell type expressing MHCII and RORγt with dual characteristics of dendritic cells and type 3 innate lymphoid cells. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Jehan W Alladina, Neal P Smith, Tristan Kooistra, Kamil Slowikowski, Isabela J Kernin, Jacques Deguine, Henry L Keen, Kasidet Manakongtreecheep, Jessica Tantivit, Rod A Rahimi, Susan L Sheng, Nhan D Nguyen, Alexis M Haring, Francesca L Giacona, Lida P Hariri, Ramnik J Xavier, Andrew D Luster, Alexandra-Chloé Villani, Josalyn L Cho, Benjamin D Medoff
A human model of asthma exacerbation reveals transcriptional programs and cell circuits specific to allergic asthma. Science immunology 8 (83) (2023)
Evgenij Fiskin, Gökçen Eraslan, Maria B Alora-Palli, Juan Manuel Leyva-Castillo, Sean Kim, Heather Choe, Caleb A Lareau, Helena Lau, Emily P Finan, Isabella Teixeira-Soldano, Brenna LaBere, Anne Chu, Brian Woods, Janet Chou, Michal Slyper, Julia Waldman, Sabina Islam, Lynda C Schneider, Wanda Phipatanakul, Craig Platt, Orit Rozenblatt-Rosen, Toni Marie Delorey, Jacques Deguine, Gideon P Smith, Raif S Geha, Aviv Regev, Ramnik J Xavier
Multi-modal skin atlas identifies a multicellular immune-stromal community associated with altered cornification and specific T cell expansion in atopic dermatitis. bioRxiv : the preprint server for biology (2023)
Alina Ulezko Antonova, Silvia Lonardi, Matilde Monti, Francesco Missale, Changxu Fan, Matthew L Coates, Mattia Bugatti, Natalia Jaeger, Patrick Fernandes Rodrigues, Simone Brioschi, Tihana Trsan, José L Fachi, Khai M Nguyen, Ryan M Nunley, Daniele Moratto, Stefania Zini, Lingjia Kong, Jacques Deguine, Mark E Peeples, Ramnik J Xavier, Menna R Clatworthy, Ting Wang, Marina Cella, William Vermi, Marco Colonna
A distinct human cell type expressing MHCII and RORγt with dual characteristics of dendritic cells and type 3 innate lymphoid cells. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Jehan W Alladina, Neal P Smith, Tristan Kooistra, Kamil Slowikowski, Isabela J Kernin, Jacques Deguine, Henry L Keen, Kasidet Manakongtreecheep, Jessica Tantivit, Rod A Rahimi, Susan L Sheng, Nhan D Nguyen, Alexis M Haring, Francesca L Giacona, Lida P Hariri, Ramnik J Xavier, Andrew D Luster, Alexandra-Chloé Villani, Josalyn L Cho, Benjamin D Medoff
A human model of asthma exacerbation reveals transcriptional programs and cell circuits specific to allergic asthma. Science immunology 8 (83) (2023)
Alina Ulezko Antonova, Silvia Lonardi, Matilde Monti, Francesco Missale, Changxu Fan, Matthew L Coates, Mattia Bugatti, Natalia Jaeger, Patrick Fernandes Rodrigues, Simone Brioschi, Tihana Trsan, José L Fachi, Khai M Nguyen, Ryan M Nunley, Daniele Moratto, Stefania Zini, Lingjia Kong, Jacques Deguine, Mark E Peeples, Ramnik J Xavier, Menna R Clatworthy, Ting Wang, Marina Cella, William Vermi, Marco Colonna
A distinct human cell type expressing MHCII and RORγt with dual characteristics of dendritic cells and type 3 innate lymphoid cells. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Alina Ulezko Antonova, Silvia Lonardi, Matilde Monti, Francesco Missale, Changxu Fan, Matthew L Coates, Mattia Bugatti, Natalia Jaeger, Patrick Fernandes Rodrigues, Simone Brioschi, Tihana Trsan, José L Fachi, Khai M Nguyen, Ryan M Nunley, Daniele Moratto, Stefania Zini, Lingjia Kong, Jacques Deguine, Mark E Peeples, Ramnik J Xavier, Menna R Clatworthy, Ting Wang, Marina Cella, William Vermi, Marco Colonna
A distinct human cell type expressing MHCII and RORγt with dual characteristics of dendritic cells and type 3 innate lymphoid cells. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Alina Ulezko Antonova, Silvia Lonardi, Matilde Monti, Francesco Missale, Changxu Fan, Matthew L Coates, Mattia Bugatti, Natalia Jaeger, Patrick Fernandes Rodrigues, Simone Brioschi, Tihana Trsan, José L Fachi, Khai M Nguyen, Ryan M Nunley, Daniele Moratto, Stefania Zini, Lingjia Kong, Jacques Deguine, Mark E Peeples, Ramnik J Xavier, Menna R Clatworthy, Ting Wang, Marina Cella, William Vermi, Marco Colonna
A distinct human cell type expressing MHCII and RORγt with dual characteristics of dendritic cells and type 3 innate lymphoid cells. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Johannes F Scheid, Basak Eraslan, Andrew Hudak, Eric M Brown, Dallis Sergio, Toni Marie Delorey, Devan Phillips, Ariel Lefkovith, Alison T Jess, Lennard W Duck, Charles O Elson, Hera Vlamakis, Damian Rafal Plichta, Jacques Deguine, Ashwin N Ananthakrishnan, Daniel B Graham, Aviv Regev, Ramnik J Xavier
Remodeling of colon plasma cell repertoire within ulcerative colitis patients. The Journal of experimental medicine 220 (4) (2023)
Alina Ulezko Antonova, Silvia Lonardi, Matilde Monti, Francesco Missale, Changxu Fan, Matthew L Coates, Mattia Bugatti, Natalia Jaeger, Patrick Fernandes Rodrigues, Simone Brioschi, Tihana Trsan, José L Fachi, Khai M Nguyen, Ryan M Nunley, Daniele Moratto, Stefania Zini, Lingjia Kong, Jacques Deguine, Mark E Peeples, Ramnik J Xavier, Menna R Clatworthy, Ting Wang, Marina Cella, William Vermi, Marco Colonna
A distinct human cell type expressing MHCII and RORγt with dual characteristics of dendritic cells and type 3 innate lymphoid cells. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Johannes F Scheid, Basak Eraslan, Andrew Hudak, Eric M Brown, Dallis Sergio, Toni Marie Delorey, Devan Phillips, Ariel Lefkovith, Alison T Jess, Lennard W Duck, Charles O Elson, Hera Vlamakis, Damian Rafal Plichta, Jacques Deguine, Ashwin N Ananthakrishnan, Daniel B Graham, Aviv Regev, Ramnik J Xavier
Remodeling of colon plasma cell repertoire within ulcerative colitis patients. The Journal of experimental medicine 220 (4) (2023)
Johannes F Scheid, Basak Eraslan, Andrew Hudak, Eric M Brown, Dallis Sergio, Toni Marie Delorey, Devan Phillips, Ariel Lefkovith, Alison T Jess, Lennard W Duck, Charles O Elson, Hera Vlamakis, Damian Rafal Plichta, Jacques Deguine, Ashwin N Ananthakrishnan, Daniel B Graham, Aviv Regev, Ramnik J Xavier
Remodeling of colon plasma cell repertoire within ulcerative colitis patients. The Journal of experimental medicine 220 (4) (2023)
Johannes F Scheid, Basak Eraslan, Andrew Hudak, Eric M Brown, Dallis Sergio, Toni Marie Delorey, Devan Phillips, Ariel Lefkovith, Alison T Jess, Lennard W Duck, Charles O Elson, Hera Vlamakis, Damian Rafal Plichta, Jacques Deguine, Ashwin N Ananthakrishnan, Daniel B Graham, Aviv Regev, Ramnik J Xavier
Remodeling of colon plasma cell repertoire within ulcerative colitis patients. The Journal of experimental medicine 220 (4) (2023)
Basak Eraslan, Eric Brown, Maura Benson, Liat Amir-Zilberstein, Sung-Moo Park, Betsabeh Tusi, Vladislav Pokatayev, Cody Hecht, Novalia Pishesha, Devan Phillips, Andy Kim, Shuting Zhang, Anthony Gaca, Fadi Ghantous, Toni Marie Delorey, Jonathan Livny, Lindsey Baden, Orit Rozenblatt-Rosen, Daniel B Graham, Aviv Regev, Michael Seaman, Ann Woolley, Lisa Cosimi, Deborah Hung, Jacques Deguine, Ramnik J Xavier
Functional analyses and single cell immunoprofiling uncover sex-specific differences in SARS-CoV2 immune memory development. Research square (2022)