Caleb A Lareau (Caleb Lareau)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 70

Top Venues

Nature

Nature biotechnology

Nature communications

bioRxiv : the preprint server for biology

Stanford University

Harvard University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Stanford University

United States

Research Fellow :: Pathology

Education History

Harvard University

United States

PHD :: Biological and Biomedical Sciences

Harvard University

United States

MSC :: Biostatistics

University of Tulsa

United States

BSC :: Mathematics

University of Tulsa

United States

BSC :: Biochemistry

Publications

Livius Penter, Nicoletta Cieri, Katie Maurer, Marwan Kwok, Haoxiang Lyu, Wesley S Lu, Giacomo Oliveira, Satyen H Gohil, Ignaty Leshchiner, Caleb A Lareau, Leif S Ludwig, Donna S Neuberg, Haesook T Kim, Shuqiang Li, Lars Bullinger, Jerome Ritz, Gad A Getz, Jacqueline S Garcia, Robert J Soiffer, Kenneth J Livak, Catherine J Wu
Tracking rare single donor and recipient immune and leukemia cells after allogeneic hematopoietic cell transplantation using mitochondrial DNA mutations. Blood cancer discovery (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature 629 (8010) (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
Publisher Correction: FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
Publisher Correction: FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Tsion Abay, Robert R Stickels, Meril T Takizawa, Benan N Nalbant, Yu-Hsin Hsieh, Sidney Hwang, Catherine Snopkowski, Kenny Kwok Hei Yu, Zaki Abou-Mrad, Viviane Tabar, Leif S Ludwig, Ronan Chaligné, Ansuman T Satpathy, Caleb A Lareau
Transcript-specific enrichment enables profiling rare cell states via scRNA-seq. bioRxiv : the preprint server for biology (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Kevin A Nuno, Armon Azizi, Thomas Koehnke, Caleb A Lareau, Asiri Ediriwickrema, M Ryan Corces, Ansuman T Satpathy, Ravindra Majeti
Convergent epigenetic evolution drives relapse in acute myeloid leukemia. eLife 13 (2024)
Kevin A Nuno, Armon Azizi, Thomas Koehnke, Caleb A Lareau, Asiri Ediriwickrema, M Ryan Corces, Ansuman T Satpathy, Ravindra Majeti
Convergent epigenetic evolution drives relapse in acute myeloid leukemia. eLife 13 (2024)
Kevin A Nuno, Armon Azizi, Thomas Koehnke, Caleb A Lareau, Asiri Ediriwickrema, M Ryan Corces, Ansuman T Satpathy, Ravindra Majeti
Convergent epigenetic evolution drives relapse in acute myeloid leukemia. eLife 13 (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Tsion Abay, Robert R Stickels, Meril T Takizawa, Benan N Nalbant, Yu-Hsin Hsieh, Sidney Hwang, Catherine Snopkowski, Kenny Kwok Hei Yu, Zaki Abou-Mrad, Viviane Tabar, Leif S Ludwig, Ronan Chaligné, Ansuman T Satpathy, Caleb A Lareau
Transcript-specific enrichment enables profiling rare cell states via scRNA-seq. bioRxiv : the preprint server for biology (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature 629 (8010) (2024)
Bence Daniel, Andy Y Chen, Katalin D Sandor, Wenxi Zhang, Zhuang Miao, Caleb A Lareau, Kathryn E Yost, Howard Y Chang, Ansuman T Satpathy
Regulation of immune signal integration and memory by inflammation-induced chromosome conformation. bioRxiv : the preprint server for biology (2024)
Samantha L Bucktrout, Nicholas E Banovich, Lisa H Butterfield, Cansu Cimen-Bozkus, Josephine R Giles, Zinaida Good, Daniel Goodman, Vanessa D Jonsson, Caleb A Lareau, Alexander Marson, Deena M Maurer, Paul V Munson, Mike Stubbington, Sarah Taylor, Abbey Cutchin
Publisher Correction: Advancing T cell-based cancer therapy with single-cell technologies. Nature medicine (2024)
Tsion Abay, Robert R Stickels, Meril T Takizawa, Benan N Nalbant, Yu-Hsin Hsieh, Sidney Hwang, Catherine Snopkowski, Kenny Kwok Hei Yu, Zaki Abou-Mrad, Viviane Tabar, Leif S Ludwig, Ronan Chaligné, Ansuman T Satpathy, Caleb A Lareau
Transcript-specific enrichment enables profiling rare cell states via scRNA-seq. bioRxiv : the preprint server for biology (2024)
Kevin A Nuno, Armon Azizi, Thomas Koehnke, Caleb A Lareau, Asiri Ediriwickrema, M Ryan Corces, Ansuman T Satpathy, Ravindra Majeti
Convergent epigenetic evolution drives relapse in acute myeloid leukemia. eLife 13 (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature 629 (8010) (2024)
Kevin A Nuno, Armon Azizi, Thomas Koehnke, Caleb A Lareau, Asiri Ediriwickrema, M Ryan Corces, Ansuman T Satpathy, Ravindra Majeti
Convergent epigenetic evolution drives relapse in acute myeloid leukemia. eLife 13 (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature 629 (8010) (2024)
Bence Daniel, Andy Y Chen, Katalin D Sandor, Wenxi Zhang, Zhuang Miao, Caleb A Lareau, Kathryn E Yost, Howard Y Chang, Ansuman T Satpathy
Regulation of immune signal integration and memory by inflammation-induced chromosome conformation. bioRxiv : the preprint server for biology (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Aidan Michael Tousley, Maria Caterina Rotiroti, Louai Labanieh, Lea Wenting Rysavy, Won-Ju Kim, Caleb A Lareau, Elena Sotillo, Evan W Weber, Skyler P Rietberg, Guillermo Nicolas Dalton, Yajie Yin, Dorota Klysz, Peng Xu, Eva L de la Serna, Alexander R Dunn, Ansuman T Satpathy, Crystal L Mackall, Robbie G Majzner
Co-opting signalling molecules enables logic-gated control of CAR T cells. Nature 615 (7952) (2023)
Aidan Michael Tousley, Maria Caterina Rotiroti, Louai Labanieh, Lea Wenting Rysavy, Won-Ju Kim, Caleb A Lareau, Elena Sotillo, Evan W Weber, Skyler P Rietberg, Guillermo Nicolas Dalton, Yajie Yin, Dorota Klysz, Peng Xu, Eva L de la Serna, Alexander R Dunn, Ansuman T Satpathy, Crystal L Mackall, Robbie G Majzner
Co-opting signalling molecules enables logic-gated control of CAR T cells. Nature 615 (7952) (2023)
Aidan Michael Tousley, Maria Caterina Rotiroti, Louai Labanieh, Lea Wenting Rysavy, Won-Ju Kim, Caleb A Lareau, Elena Sotillo, Evan W Weber, Skyler P Rietberg, Guillermo Nicolas Dalton, Yajie Yin, Dorota Klysz, Peng Xu, Eva L de la Serna, Alexander R Dunn, Ansuman T Satpathy, Crystal L Mackall, Robbie G Majzner
Co-opting signalling molecules enables logic-gated control of CAR T cells. Nature 615 (7952) (2023)
Aidan Michael Tousley, Maria Caterina Rotiroti, Louai Labanieh, Lea Wenting Rysavy, Won-Ju Kim, Caleb A Lareau, Elena Sotillo, Evan W Weber, Skyler P Rietberg, Guillermo Nicolas Dalton, Yajie Yin, Dorota Klysz, Peng Xu, Eva L de la Serna, Alexander R Dunn, Ansuman T Satpathy, Crystal L Mackall, Robbie G Majzner
Co-opting signalling molecules enables logic-gated control of CAR T cells. Nature (2023)
Kevin A Nuno, Armon Azizi, Thomas Köhnke, Caleb A Lareau, Asiri Ediwirickrema, M Ryan Corces, Ansuman T Satpathy, Ravindra Majeti
Convergent Epigenetic Evolution Drives Relapse in Acute Myeloid Leukemia. bioRxiv : the preprint server for biology (2023)
Caleb A Lareau, Sonia M Dubois, Frank A Buquicchio, Yu-Hsin Hsieh, Kopal Garg, Pauline Kautz, Lena Nitsch, Samantha D Praktiknjo, Patrick Maschmeyer, Jeffrey M Verboon, Jacob C Gutierrez, Yajie Yin, Evgenij Fiskin, Wendy Luo, Eleni P Mimitou, Christoph Muus, Rhea Malhotra, Sumit Parikh, Mark Daniel Fleming, Lena Oevermann, Johannes Hubertus Schulte, Cornelia Eckert, Anshul Kundaje, Peter Smibert, Santosha A Vardhana, Ansuman T Satpathy, Aviv Regev, Vijay G Sankaran, Suneet Agarwal, Leif S Ludwig
Single-cell multi-omics of mitochondrial DNA disorders reveals dynamics of purifying selection across human immune cells. Nature genetics (2023)
Caleb A Lareau, Yajie Yin, Katie Maurer, Katalin D Sandor, Bence Daniel, Garima Yagnik, José Peña, Jeremy Chase Crawford, Stephan Mielke, Jacob C Gutierrez, Nicholas J Haradhvala, Janice M Riberdy, Tsion Abay, Robert R Stickels, Jeffrey M Verboon, Vincent Liu, Frank A Buquicchio, Fangyi Wang, Jackson Southard, Ren Song, Wenjing Li, Aastha Shrestha, Laxmi Parida, Gad A Getz, Marcela V Maus, Shuqiang Li, Alison Moore, Zachary J Roberts, Leif S Ludwig, Aimee C Talleur, Paul Glyndwr Thomas, Houman Dehghani, Thomas Pertel, Anshul Kundaje, Stephen Gottschalk, Theodore L Roth, Marie José Kersten, Catherine J Wu, Robbie G Majzner, Ansuman T Satpathy
Latent human herpesvirus 6 is reactivated in CAR T cells. Nature (2023)
Evgenij Fiskin, Gökçen Eraslan, Maria B Alora-Palli, Juan Manuel Leyva-Castillo, Sean Kim, Heather Choe, Caleb A Lareau, Helena Lau, Emily P Finan, Isabella Teixeira-Soldano, Brenna LaBere, Anne Chu, Brian Woods, Janet Chou, Michal Slyper, Julia Waldman, Sabina Islam, Lynda C Schneider, Wanda Phipatanakul, Craig Platt, Orit Rozenblatt-Rosen, Toni Marie Delorey, Jacques Deguine, Gideon P Smith, Raif S Geha, Aviv Regev, Ramnik J Xavier
Multi-modal skin atlas identifies a multicellular immune-stromal community associated with altered cornification and specific T cell expansion in atopic dermatitis. bioRxiv : the preprint server for biology (2023)
Caleb A Lareau, Leif S Ludwig, Christoph Muus, Satyen H Gohil, Tongtong Zhao, Zachary Chiang, Karin Pelka, Jeffrey M Verboon, Wendy Luo, Elena Christian, Daniel Rosebrock, Gad A Getz, Genevieve M Boland, Fei Chen, Jason D Buenrostro, Nir Hacohen, Catherine J Wu, Martin J Aryee, Aviv Regev, Vijay G Sankaran
Author Correction: Massively parallel single-cell mitochondrial DNA genotyping and chromatin profiling. Nature biotechnology (2023)
Caleb A Lareau, Vincent Liu, Christoph Muus, Samantha D Praktiknjo, Lena Nitsch, Pauline Kautz, Katalin D Sandor, Yajie Yin, Jacob C Gutierrez, Karin Pelka, Ansuman T Satpathy, Aviv Regev, Vijay G Sankaran, Leif S Ludwig
Mitochondrial single-cell ATAC-seq for high-throughput multi-omic detection of mitochondrial genotypes and chromatin accessibility. Nature protocols (2023)
Caleb A Lareau
Subtle cell states resolved in single-cell data. Nature biotechnology (2023)
Crystal L Mackall, Alexander Doan, Katherine Mueller, Andy Y Chen, Geoffrey Rouin, Bence Daniel, John Lattin, Yingshi Chen, Brett Mozarsky, Martina Markovska, Jose Arias-Umana, Robert Robert Hapke, Inyoung Jung, Peng Xu, Dorota Klysz, Malek Bashti, Patrick J Quinn, Katalin D Sandor, Wenxi Zhang, Junior Hall, Caleb A Lareau, Stephan Grupp, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Evan Weber
FOXO1 is a master regulator of CAR T memory programming. Research square (2023)
Aidan Michael Tousley, Maria Caterina Rotiroti, Louai Labanieh, Lea Wenting Rysavy, Won-Ju Kim, Caleb A Lareau, Elena Sotillo, Evan W Weber, Skyler P Rietberg, Guillermo Nicolas Dalton, Yajie Yin, Dorota Klysz, Peng Xu, Eva L de la Serna, Alexander R Dunn, Ansuman T Satpathy, Crystal L Mackall, Robbie G Majzner
Co-opting signalling molecules enables logic-gated control of CAR T cells. Nature 615 (7952) (2023)
Ranit Kedmi, Tariq A Najar, Kailin R Mesa, Allyssa Grayson, Lina Kroehling, Yuhan Hao, Stephanie Hao, Maria Pokrovskii, Mo Xu, Jhimmy Talbot, Jiaxi Wang, Joe Germino, Caleb A Lareau, Ansuman T Satpathy, Mark S Anderson, Terri M Laufer, Iannis Aifantis, Juliet M Bartleson, Paul M Allen, Helena Paidassi, James M Gardner, Marlon Stoeckius, Dan R Littman
A RORγt + cell instructs gut microbiota-specific T reg cell differentiation. Nature 610 (7933) (2022)
Eshini Panditharatna, Joana G Marques, Tingjian Wang, Maria C Trissal, Ilon Liu, Li Jiang, Alexander Beck, Andrew Groves, Neekesh V Dharia, Deyao Li, Samantha E Hoffman, Guillaume Kugener, McKenzie L Shaw, Hafsa M Mire, Olivia A Hack, Joshua M Dempster, Caleb A Lareau, Lingling Dai, Logan H Sigua, Michael A Quezada, Ann-Catherine J Stanton, Meghan Wyatt, Zohra Kalani, Amy Goodale, Francisca Vazquez, Frederica Piccioni, John G Doench, David E Root, Jamie N Anastas, Kristen L Jones, Amy Saur Conway, Sylwia A Stopka, Michael S Regan, Yu Liang, Hyuk-Soo Seo, Kijun Song, Puspalata Bashyal, William P Jerome, Nathan D Mathewson, Sirano Dhe-Paganon, Mario L Suvà, Angel Montero Carcaboso, Cinzia Lavarino, Jaume Catala-Mora, Quang-De Nguyen, Keith L Ligon, Yang Shi, Sameer Agnihotri, Nathalie Y R Agar, Kimberly Stegmaier, Charles D Stiles, Michelle Monje, Todd R Golub, Jun Qi, Mariella G Filbin
BAF Complex Maintains Glioma Stem Cells in Pediatric H3K27M Glioma. Cancer discovery 12 (12) (2022)
Timo Rückert, Caleb A Lareau, Mir-Farzin Mashreghi, Leif S Ludwig, Chiara Romagnani
Clonal expansion and epigenetic inheritance of long-lasting NK cell memory. Nature immunology 23 (11) (2022)
Ram Ajore, Abhishek Niroula, Maroulio Pertesi, Caterina Cafaro, Malte Thodberg, Molly Went, Erik L Bao, Laura Duran-Lozano, Aitzkoa Lopez de Lapuente Portilla, Thorunn Asta Olafsdottir, Nerea Ugidos-Damboriena, Olafur Magnusson, Mehmet Kemal Samur, Caleb A Lareau, Gisli Hreinn Halldorsson, Gudmar Thorleifsson, Gudmundur L Norddahl, Kristbjorg Gunnarsdottir, Asta Försti, Hartmut Goldschmidt, Kari Hemminki, Frits van Rhee, Scott Kimber, Adam S Sperling, Martin F Kaiser, Kenneth C Anderson, Ingileif Jónsdóttir, Nikhil C Munshi, Thorunn Rafnar, Anders Waage, Niels Weinhold, Unnur Thorsteinsdottir, Vijay G Sankaran, Kári Stefánsson, Richard S Houlston, Björn Nilsson
Functional dissection of inherited non-coding variation influencing multiple myeloma risk. Nature communications 13 (1) (2022)
Leif S Ludwig, Caleb A Lareau, Erik L Bao, Nan Liu, Taiju Utsugisawa, Alex M Tseng, Samuel A Myers, Jeffrey M Verboon, Jacob C Ulirsch, Wendy Luo, Christoph Muus, Claudia Fiorini, Meagan E Olive, Christopher M Vockley, Mathias Munschauer, Abigail Hunter, Hiromi Ogura, Toshiyuki Yamamoto, Hiroko Inada, Shinichiro Nakagawa, Shuichi Ozono, Vidya Subramanian, Roberto Chiarle, Bertil Glader, Steven A Carr, Martin J Aryee, Anshul Kundaje, Stuart H Orkin, Aviv Regev, Timothy L McCavit, Hitoshi Kanno, Vijay G Sankaran
Congenital anemia reveals distinct targeting mechanisms for master transcription factor GATA1. Blood 139 (16) (2022)
Samantha L Bucktrout, Nicholas E Banovich, Lisa H Butterfield, Cansu Cimen-Bozkus, Josephine R Giles, Zinaida Good, Daniel Goodman, Vanessa D Jonsson, Caleb A Lareau, Alexander Marson, Denna M Maurer, Paul V Munson, Mike Stubbington, Sarah Taylor, Abbey Cutchin
Advancing T cell-based cancer therapy with single-cell technologies. Nature medicine 28 (9) (2022)
Ram Ajore, Abhishek Niroula, Maroulio Pertesi, Caterina Cafaro, Malte Thodberg, Molly Went, Erik L Bao, Laura Duran-Lozano, Aitzkoa Lopez de Lapuente Portilla, Thorunn Asta Olafsdottir, Nerea Ugidos-Damboriena, Olafur Magnusson, Mehmet Kemal Samur, Caleb A Lareau, Gisli Hreinn Halldorsson, Gudmar Thorleifsson, Gudmundur L Norddahl, Kristbjorg Gunnarsdottir, Asta Försti, Hartmut Goldschmidt, Kari Hemminki, Frits van Rhee, Scott Kimber, Adam S Sperling, Martin F Kaiser, Kenneth C Anderson, Ingileif Jónsdóttir, Nikhil C Munshi, Thorunn Rafnar, Anders Waage, Niels Weinhold, Unnur Thorsteinsdottir, Vijay G Sankaran, Kári Stefánsson, Richard S Houlston, Björn Nilsson
Author Correction: Functional dissection of inherited non-coding variation influencing multiple myeloma risk. Nature communications 13 (1) (2022)
Livius Penter, Elisa Ten Hacken, Jackson Southard, Caleb A Lareau, Leif S Ludwig, Shuqiang Li, Donna S Neuberg, Kenneth J Livak, Catherine J Wu
Mitochondrial DNA mutations as natural barcodes for lineage tracing of murine tumor models. Cancer research (2022)
Tyler E Miller, Caleb A Lareau, Julia A Verga, Erica A K DePasquale, Vincent Liu, Daniel Ssozi, Katalin D Sandor, Yajie Yin, Leif S Ludwig, Chadi A El Farran, Duncan M Morgan, Ansuman T Satpathy, Gabriel K Griffin, Andrew A Lane, John Christopher Love, Bradley E Bernstein, Vijay G Sankaran, Peter van Galen
Mitochondrial variant enrichment from high-throughput single-cell RNA sequencing resolves clonal populations. Nature biotechnology 40 (7) (2022)
Raíssa Fonseca, Thomas N Burn, Luke C Gandolfo, Sapna Devi, Simone L Park, Andreas Obers, Maximilien Evrard, Susan N Christo, Frank A Buquicchio, Caleb A Lareau, Keely M McDonald, Sarah K Sandford, Natasha M Zamudio, Nagela G Zanluqui, Ali Zaid, Terence P Speed, Ansuman T Satpathy, Scott N Mueller, Francis R Carbone, Laura K Mackay
Runx3 drives a CD8 + T cell tissue residency program that is absent in CD4 + T cells. Nature immunology 23 (8) (2022)
Ram Ajore, Abhishek Niroula, Maroulio Pertesi, Caterina Cafaro, Malte Thodberg, Molly Went, Erik L Bao, Laura Duran-Lozano, Aitzkoa Lopez de Lapuente Portilla, Thorunn Asta Olafsdottir, Nerea Ugidos-Damboriena, Olafur Magnusson, Mehmet Kemal Samur, Caleb A Lareau, Gisli Hreinn Halldorsson, Gudmar Thorleifsson, Gudmundur L Norddahl, Kristbjorg Gunnarsdottir, Asta Försti, Hartmut Goldschmidt, Kari Hemminki, Frits van Rhee, Scott Kimber, Adam S Sperling, Martin F Kaiser, Kenneth C Anderson, Ingileif Jónsdóttir, Nikhil C Munshi, Thorunn Rafnar, Anders Waage, Niels Weinhold, Unnur Thorsteinsdottir, Vijay G Sankaran, Kári Stefánsson, Richard S Houlston, Björn Nilsson
Author Correction: Functional dissection of inherited non-coding variation influencing multiple myeloma risk. Nature communications 13 (1) (2022)
Hamish W King, Kristen L Wells, Zohar Shipony, Arwa S Kathiria, Lisa E Wagar, Caleb A Lareau, Nara Orban, Robson Capasso, Mark M Davis, Lars M Steinmetz, Louisa Katherine James, William J Greenleaf
Integrated single-cell transcriptomics and epigenomics reveals strong germinal center-associated etiology of autoimmune risk loci. Science immunology 6 (64) (2021)
Jiaxi Wang, Caleb A Lareau, Jhoanne L Bautista, Alexander R Gupta, Katalin D Sandor, Joe Germino, Yajie Yin, Matthew P Arvedson, Gabriella C Reeder, Nathan T Cramer, Fang Xie, Vasilis Ntranos, Ansuman T Satpathy, Mark S Anderson, James M Gardner
Single-cell multiomics defines tolerogenic extrathymic Aire-expressing populations with unique homology to thymic epithelium. Science immunology 6 (65) (2021)
Tongtong Zhao, Zachary D Chiang, Julia W Morriss, Lindsay M LaFave, Evan M Murray, Isabella Del Priore, Kevin Meli, Caleb A Lareau, Naeem M Nadaf, Jilong Li, Andrew Scott Earl, Evan Z Macosko, Tyler Jacks, Jason D Buenrostro, Fei Chen
Spatial genomics enables multi-modal study of clonal heterogeneity in tissues. Nature 601 (7891) (2021)
Eleni P Mimitou, Caleb A Lareau, Kelvin Y Chen, Andre L Zorzetto-Fernandes, Yuhan Hao, Yusuke Takeshima, Wendy Luo, Tse-Shun Huang, Bertrand Z Yeung, Efthymia Papalexi, Pratiksha I Thakore, Tatsuya Kibayashi, James Badger Wing, Mayu Hata, Rahul Satija, Kristopher L Nazor, Shimon Sakaguchi, Leif S Ludwig, Vijay G Sankaran, Aviv Regev, Peter Smibert
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells. Nature biotechnology 39 (10) (2021)
Livius Penter, Satyen H Gohil, Caleb A Lareau, Leif S Ludwig, Erin M Parry, Teddy Huang, Shuqiang Li, Wandi Zhang, Dimitri Livitz, Ignaty Leshchiner, Laxmi Parida, Gad A Getz, Laura Z Rassenti, Thomas J Kipps, Jennifer R Brown, Matthew S Davids, Donna S Neuberg, Kenneth J Livak, Vijay G Sankaran, Catherine J Wu
Longitudinal Single-Cell Dynamics of Chromatin Accessibility and Mitochondrial Mutations in Chronic Lymphocytic Leukemia Mirror Disease History. Cancer discovery (2021)
John P Ray, Carl G de Boer, Charles P Fulco, Caleb A Lareau, Masahiro Kanai, Jacob C Ulirsch, Ryan Tewhey, Leif S Ludwig, Steven K Reilly, Drew T Bergman, Jesse M Engreitz, Robbyn Issner, Hilary K Finucane, Eric S Lander, Aviv Regev, Nir Hacohen
Prioritizing disease and trait causal variants at the TNFAIP3 locus using functional and genomic features. Nature communications 11 (1) (2020)
Nora Schmidt, Caleb A Lareau, Hasmik Keshishian, Sabina Ganskih, Cornelius Schneider, Thomas Hennig, Randy Melanson, Simone Werner, Yuanjie Wei, Matthias Zimmer, Jens Ade, Luisa Kirschner, Sebastian Zielinski, Lars Dölken, Eric S Lander, Neva Caliskan, Utz Fischer, Jörg Vogel, Steven A Carr, Jochen Bodem, Mathias Munschauer
The SARS-CoV-2 RNA-protein interactome in infected human cells. Nature microbiology 6 (3) (2020)
Erik L Bao, Satish K Nandakumar, Xiaotian Liao, Alexander G Bick, Juha Karjalainen, Marcin Tabaka, Olga I Gan, Aki S Havulinna, Tuomo Tapio Johannes Kiiskinen, Caleb A Lareau, Aitzkoa L de Lapuente Portilla, Bo Li, Connor A Emdin, Veryan Codd, Christopher P Nelson, Christopher J Walker, Claire Churchhouse, Albert de la Chapelle, Daryl E Klein, Björn Nilsson, Peter W F Wilson, Kelly Cho, Saiju Pyarajan, J Michael Gaziano, Nilesh J Samani, null null, null null, Aviv Regev, Aarno Palotie, Benjamin M Neale, John E Dick, Pradeep Natarajan, Christopher J O'Donnell, Mark J Daly, Michael Milyavsky, Sekar Kathiresan, Vijay G Sankaran
Inherited myeloproliferative neoplasm risk affects haematopoietic stem cells. Nature 586 (7831) (2020)
Julian Grünewald, Ronghao Zhou, Caleb A Lareau, Sara P Garcia, Sowmya Iyer, Bret R Miller, Lukas M Langner, Jonathan Y Hsu, Martin J Aryee, J Keith Joung
A dual-deaminase CRISPR base editor enables concurrent adenine and cytosine editing. Nature biotechnology 38 (7) (2020)
Caleb A Lareau, Sai Ma, Fabiana M Duarte, Jason D Buenrostro
Inference and effects of barcode multiplets in droplet-based single-cell assays. Nature communications 11 (1) (2020)
Caleb A Lareau, Leif S Ludwig, Christoph Muus, Satyen H Gohil, Tongtong Zhao, Zachary Chiang, Karin Pelka, Jeffrey M Verboon, Wendy Luo, Elena Christian, Daniel Rosebrock, Gad A Getz, Genevieve M Boland, Fei Chen, Jason D Buenrostro, Nir Hacohen, Catherine J Wu, Martin J Aryee, Aviv Regev, Vijay G Sankaran
Massively parallel single-cell mitochondrial DNA genotyping and chromatin profiling. Nature biotechnology 39 (4) (2020)
Caleb A Lareau, Fabiana M Duarte, Jennifer G Chew, Vinay K Kartha, Zachary Daniel Burkett, Andrew S Kohlway, Dmitry Pokholok, Martin J Aryee, Frank J Steemers, Ronald Lebofsky, Jason D Buenrostro
Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility. Nature biotechnology 37 (8) (2019)
Satish K Nandakumar, Sean K McFarland, Laura M Mateyka, Caleb A Lareau, Jacob C Ulirsch, Leif S Ludwig, Gaurav Agarwal, Jesse M Engreitz, Bartlomiej Przychodzen, Marie McConkey, Glenn S Cowley, John G Doench, Jaroslaw P Maciejewski, Benjamin L Ebert, David E Root, Vijay G Sankaran
Gene-centric functional dissection of human genetic variation uncovers regulators of hematopoiesis. eLife 8 (2019)
Jacob C Ulirsch, Caleb A Lareau, Erik L Bao, Leif S Ludwig, Michael H Guo, Christian Benner, Ansuman T Satpathy, Vinay K Kartha, Rany M Salem, Joel N Hirschhorn, Hilary K Finucane, Martin J Aryee, Jason D Buenrostro, Vijay G Sankaran
Interrogation of human hematopoiesis at single-cell and single-variant resolution. Nature genetics 51 (4) (2019)
Erik L Bao, Caleb A Lareau, Carlo Brugnara, Isabel R Fulcher, Caroline Barau, Stephane Moutereau, Anoosha Habibi, Bouchra Badaoui, Jugurtha Berkenou, Pablo Bartolucci, Frédéric Galactéros, Orah S Platt, Michael Mahaney, Vijay G Sankaran
Heritability of fetal hemoglobin, white cell count, and other clinical traits from a sickle cell disease family cohort. American journal of hematology 94 (5) (2019)
Julian Grünewald, Ronghao Zhou, Sowmya Iyer, Caleb A Lareau, Sara P Garcia, Martin J Aryee, J Keith Joung
CRISPR DNA base editors with reduced RNA off-target and self-editing activities. Nature biotechnology 37 (9) (2019)
Caleb A Lareau, Martin J Aryee
hichipper: a preprocessing pipeline for calling DNA loops from HiChIP data. Nature methods 15 (3) (2019)
Huidong Chen, Luca Albergante, Jonathan Y Hsu, Caleb A Lareau, Giosue' Lo Bosco, Jihong Guan, Shuigeng Zhou, Alexander N Gorban, Daniel E Bauer, Martin J Aryee, David M Langenau, Andrei Zinovyev, Jason D Buenrostro, Guo-Cheng Yuan, Luca Pinello
Single-cell trajectories reconstruction, exploration and mapping of omics data with STREAM. Nature communications 10 (1) (2019)
Joshua Pan, Zachary M McKenzie, Andrew R D'Avino, Nazar Mashtalir, Caleb A Lareau, Roodolph St Pierre, Lu Wang, Ali Shilatifard, Cigall Kadoch
The ATPase module of mammalian SWI/SNF family complexes mediates subcomplex identity and catalytic activity-independent genomic targeting. Nature genetics 51 (4) (2019)
Richard C Pelikan, Jennifer A Kelly, Yao Fu, Caleb A Lareau, Kandice L Tessneer, Graham B Wiley, Mandi M Wiley, Stuart B Glenn, John B Harley, Joel M Guthridge, Judith A James, Martin J Aryee, Courtney Montgomery, Patrick M Gaffney
Enhancer histone-QTLs are enriched on autoimmune risk haplotypes and influence gene expression within chromatin networks. Nature communications 9 (1) (2018)
Brittany C Michel, Andrew R D'Avino, Seth H Cassel, Nazar Mashtalir, Zachary M McKenzie, Matthew J McBride, Alfredo M Valencia, Qianhe Zhou, Michael Bocker, Luis M M Soares, Joshua Pan, David I Remillard, Caleb A Lareau, Hayley J Zullow, Nora Fortoul, Nathanael S Gray, James E Bradner, Ho Man Chan, Cigall Kadoch
A non-canonical SWI/SNF complex is a synthetic lethal target in cancers driven by BAF complex perturbation. Nature cell biology 20 (12) (2018)
Ansuman T Satpathy, Naresha Saligrama, Jason D Buenrostro, Yuning Wei, Beijing Wu, Adam J Rubin, Jeffrey M Granja, Caleb A Lareau, Rui Li, Yanyan Qi, Kevin R Parker, Maxwell R Mumbach, William S Serratelli, David G Gennert, Alicia N Schep, M Ryan Corces, Michael S Khodadoust, Youn H Kim, Paul A Khavari, William J Greenleaf, Mark M Davis, Howard Y Chang
Transcript-indexed ATAC-seq for precision immune profiling. Nature medicine 24 (5) (2018)
Qin Tang, Sowmya Iyer, Riadh Lobbardi, John C Moore, Huidong Chen, Caleb A Lareau, Christine Hebert, McKenzie L Shaw, Cyril Neftel, Mario L Suva, Yvonne J K Edwards, Andre Bernards, Martin Aryee, Luca Pinello, Iain A Drummond, David M Langenau
Dissecting hematopoietic and renal cell heterogeneity in adult zebrafish at single-cell resolution using RNA sequencing. The Journal of experimental medicine 214 (10) (2017)

Caleb A Lareau.css-eqlu8i{font-size:small;padding-left:4px;} (Caleb Lareau)

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Caleb A Lareau (Caleb Lareau)