James M Holton

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 24

Top Topics

Electron Transfer

Room Temperature

Molecular Dynamics

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Science advances

Nature biotechnology

This page only lists publications with an associated author ORCID identifier.

Publications

Thomas R M Barends, Alexander Gorel, Swarnendu Bhattacharyya, Giorgio Schirò, Camila Bacellar, Claudio Cirelli, Jacques-Philippe Colletier, Lutz Foucar, Marie Luise Grünbein, Elisabeth Hartmann, Mario Hilpert, James M Holton, Philip J M Johnson, Marco Kloos, Gregor Knopp, Bogdan Marekha, Karol Nass, Gabriela Nass Kovacs, Dmitry Ozerov, Miriam Stricker, Martin Weik, R Bruce Doak, Robert L Shoeman, Christopher J Milne, Miquel Huix-Rotllant, Marco Cammarata, Ilme Schlichting
Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature (2024)
Thomas R M Barends, Alexander Gorel, Swarnendu Bhattacharyya, Giorgio Schirò, Camila Bacellar, Claudio Cirelli, Jacques-Philippe Colletier, Lutz Foucar, Marie Luise Grünbein, Elisabeth Hartmann, Mario Hilpert, James M Holton, Philip J M Johnson, Marco Kloos, Gregor Knopp, Bogdan Marekha, Karol Nass, Gabriela Nass Kovacs, Dmitry Ozerov, Miriam Stricker, Martin Weik, R Bruce Doak, Robert L Shoeman, Christopher J Milne, Miquel Huix-Rotllant, Marco Cammarata, Ilme Schlichting
Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature (2024)
Thomas R M Barends, Alexander Gorel, Swarnendu Bhattacharyya, Giorgio Schirò, Camila Bacellar, Claudio Cirelli, Jacques-Philippe Colletier, Lutz Foucar, Marie Luise Grünbein, Elisabeth Hartmann, Mario Hilpert, James M Holton, Philip J M Johnson, Marco Kloos, Gregor Knopp, Bogdan Marekha, Karol Nass, Gabriela Nass Kovacs, Dmitry Ozerov, Miriam Stricker, Martin Weik, R Bruce Doak, Robert L Shoeman, Christopher J Milne, Miquel Huix-Rotllant, Marco Cammarata, Ilme Schlichting
Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature 626 (8000) (2024)
Thomas R M Barends, Alexander Gorel, Swarnendu Bhattacharyya, Giorgio Schirò, Camila Bacellar, Claudio Cirelli, Jacques-Philippe Colletier, Lutz Foucar, Marie Luise Grünbein, Elisabeth Hartmann, Mario Hilpert, James M Holton, Philip J M Johnson, Marco Kloos, Gregor Knopp, Bogdan Marekha, Karol Nass, Gabriela Nass Kovacs, Dmitry Ozerov, Miriam Stricker, Martin Weik, R Bruce Doak, Robert L Shoeman, Christopher J Milne, Miquel Huix-Rotllant, Marco Cammarata, Ilme Schlichting
Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature (2024)
Thomas R M Barends, Alexander Gorel, Swarnendu Bhattacharyya, Giorgio Schirò, Camila Bacellar, Claudio Cirelli, Jacques-Philippe Colletier, Lutz Foucar, Marie Luise Grünbein, Elisabeth Hartmann, Mario Hilpert, James M Holton, Philip J M Johnson, Marco Kloos, Gregor Knopp, Bogdan Marekha, Karol Nass, Gabriela Nass Kovacs, Dmitry Ozerov, Miriam Stricker, Martin Weik, R Bruce Doak, Robert L Shoeman, Christopher J Milne, Miquel Huix-Rotllant, Marco Cammarata, Ilme Schlichting
Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature 626 (8000) (2024)
Thomas R M Barends, Alexander Gorel, Swarnendu Bhattacharyya, Giorgio Schirò, Camila Bacellar, Claudio Cirelli, Jacques-Philippe Colletier, Lutz Foucar, Marie Luise Grünbein, Elisabeth Hartmann, Mario Hilpert, James M Holton, Philip J M Johnson, Marco Kloos, Gregor Knopp, Bogdan Marekha, Karol Nass, Gabriela Nass Kovacs, Dmitry Ozerov, Miriam Stricker, Martin Weik, R Bruce Doak, Robert L Shoeman, Christopher J Milne, Miquel Huix-Rotllant, Marco Cammarata, Ilme Schlichting
Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature 626 (8000) (2024)
Thomas R M Barends, Alexander Gorel, Swarnendu Bhattacharyya, Giorgio Schirò, Camila Bacellar, Claudio Cirelli, Jacques-Philippe Colletier, Lutz Foucar, Marie Luise Grünbein, Elisabeth Hartmann, Mario Hilpert, James M Holton, Philip J M Johnson, Marco Kloos, Gregor Knopp, Bogdan Marekha, Karol Nass, Gabriela Nass Kovacs, Dmitry Ozerov, Miriam Stricker, Martin Weik, R Bruce Doak, Robert L Shoeman, Christopher J Milne, Miquel Huix-Rotllant, Marco Cammarata, Ilme Schlichting
Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature 626 (8000) (2024)
Thomas R M Barends, Alexander Gorel, Swarnendu Bhattacharyya, Giorgio Schirò, Camila Bacellar, Claudio Cirelli, Jacques-Philippe Colletier, Lutz Foucar, Marie Luise Grünbein, Elisabeth Hartmann, Mario Hilpert, James M Holton, Philip J M Johnson, Marco Kloos, Gregor Knopp, Bogdan Marekha, Karol Nass, Gabriela Nass Kovacs, Dmitry Ozerov, Miriam Stricker, Martin Weik, R Bruce Doak, Robert L Shoeman, Christopher J Milne, Miquel Huix-Rotllant, Marco Cammarata, Ilme Schlichting
Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature 626 (8000) (2024)
Thomas R M Barends, Alexander Gorel, Swarnendu Bhattacharyya, Giorgio Schirò, Camila Bacellar, Claudio Cirelli, Jacques-Philippe Colletier, Lutz Foucar, Marie Luise Grünbein, Elisabeth Hartmann, Mario Hilpert, James M Holton, Philip J M Johnson, Marco Kloos, Gregor Knopp, Bogdan Marekha, Karol Nass, Gabriela Nass Kovacs, Dmitry Ozerov, Miriam Stricker, Martin Weik, R Bruce Doak, Robert L Shoeman, Christopher J Milne, Miquel Huix-Rotllant, Marco Cammarata, Ilme Schlichting
Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature 626 (8000) (2024)
Thomas R M Barends, Alexander Gorel, Swarnendu Bhattacharyya, Giorgio Schirò, Camila Bacellar, Claudio Cirelli, Jacques-Philippe Colletier, Lutz Foucar, Marie Luise Grünbein, Elisabeth Hartmann, Mario Hilpert, James M Holton, Philip J M Johnson, Marco Kloos, Gregor Knopp, Bogdan Marekha, Karol Nass, Gabriela Nass Kovacs, Dmitry Ozerov, Miriam Stricker, Martin Weik, R Bruce Doak, Robert L Shoeman, Christopher J Milne, Miquel Huix-Rotllant, Marco Cammarata, Ilme Schlichting
Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature (2024)
Asmit Bhowmick, Rana Hussein, Isabel Bogacz, Philipp S Simon, Mohamed Ibrahim, Ruchira Chatterjee, Margaret D Doyle, Mun Hon Cheah, Thomas Fransson, Petko Chernev, In-Sik Kim, Hiroki Makita, Medhanjali Dasgupta, Corey J Kaminsky, Miao Zhang, Julia Gätcke, Stephanie Haupt, Isabela I Nangca, Stephen M Keable, A Orkun Aydin, Kensure Tono, Shigeki Owada, Leland B Gee, Franklin D Fuller, Alexander Batyuk, Roberto Alonso Mori, James M Holton, Daniel W Paley, Nigel W Moriarty, Fikret Mamedov, Paul D Adams, Aaron S Brewster, Holger Dobbek, Nicholas K Sauter, Uwe Bergmann, Athina Zouni, Johannes Messinger, Jan F Kern, Junko Yano, Vittal K Yachandra
Author Correction: Structural evidence for intermediates during O 2 formation in photosystem II. Nature (2024)
Ali Madani, Ben Krause, Eric R Greene, Subu Subramanian, Benjamin P Mohr, James M Holton, Jose Luis Olmos, Caiming Xiong, Zachary Z Sun, Richard Socher, James S Fraser, Nikhil Naik
Large language models generate functional protein sequences across diverse families. Nature biotechnology (2023)
Asmit Bhowmick, Rana Hussein, Isabel Bogacz, Philipp S Simon, Mohamed Ibrahim, Ruchira Chatterjee, Margaret D Doyle, Mun Hon Cheah, Thomas Fransson, Petko Chernev, In-Sik Kim, Hiroki Makita, Medhanjali Dasgupta, Corey J Kaminsky, Miao Zhang, Julia Gätcke, Stephanie Haupt, Isabela I Nangca, Stephen M Keable, A Orkun Aydin, Kensure Tono, Shigeki Owada, Leland B Gee, Franklin D Fuller, Alexander Batyuk, Roberto Alonso Mori, James M Holton, Daniel W Paley, Nigel W Moriarty, Fikret Mamedov, Paul D Adams, Aaron S Brewster, Holger Dobbek, Nicholas K Sauter, Uwe Bergmann, Athina Zouni, Johannes Messinger, Jan F Kern, Junko Yano, Vittal K Yachandra
Structural evidence for intermediates during O 2 formation in photosystem II. Nature (2023)
Asmit Bhowmick, Rana Hussein, Isabel Bogacz, Philipp S Simon, Mohamed Ibrahim, Ruchira Chatterjee, Margaret D Doyle, Mun Hon Cheah, Thomas Fransson, Petko Chernev, In-Sik Kim, Hiroki Makita, Medhanjali Dasgupta, Corey J Kaminsky, Miao Zhang, Julia Gätcke, Stephanie Haupt, Isabela I Nangca, Stephen M Keable, A Orkun Aydin, Kensure Tono, Shigeki Owada, Leland B Gee, Franklin D Fuller, Alexander Batyuk, Roberto Alonso Mori, James M Holton, Daniel W Paley, Nigel W Moriarty, Fikret Mamedov, Paul D Adams, Aaron S Brewster, Holger Dobbek, Nicholas K Sauter, Uwe Bergmann, Athina Zouni, Johannes Messinger, Jan F Kern, Junko Yano, Vittal K Yachandra
Structural evidence for intermediates during O 2 formation in photosystem II. Nature 617 (7961) (2023)
Asmit Bhowmick, Rana Hussein, Isabel Bogacz, Philipp S Simon, Mohamed Ibrahim, Ruchira Chatterjee, Margaret D Doyle, Mun Hon Cheah, Thomas Fransson, Petko Chernev, In-Sik Kim, Hiroki Makita, Medhanjali Dasgupta, Corey J Kaminsky, Miao Zhang, Julia Gätcke, Stephanie Haupt, Isabela I Nangca, Stephen M Keable, A Orkun Aydin, Kensure Tono, Shigeki Owada, Leland B Gee, Franklin D Fuller, Alexander Batyuk, Roberto Alonso Mori, James M Holton, Daniel W Paley, Nigel W Moriarty, Fikret Mamedov, Paul D Adams, Aaron S Brewster, Holger Dobbek, Nicholas K Sauter, Uwe Bergmann, Athina Zouni, Johannes Messinger, Jan F Kern, Junko Yano, Vittal K Yachandra
Structural evidence for intermediates during O 2 formation in photosystem II. Nature (2023)
Alexander M Wolff, Eriko Nango, Iris D Young, Aaron S Brewster, Minoru Kubo, Takashi Nomura, Michihiro Sugahara, Shigeki Owada, Benjamin A Barad, Kazutaka Ito, Asmit Bhowmick, Sergio Carbajo, Tomoya Hino, James M Holton, Dohyun Im, Lee J O'Riordan, Tomoyuki Tanaka, Rie Tanaka, Raymond G Sierra, Fumiaki Yumoto, Kensure Tono, So Iwata, Nicholas K Sauter, Brian K Shoichet, Michael C Thompson
Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography. Nature chemistry (2023)
Asmit Bhowmick, Rana Hussein, Isabel Bogacz, Philipp S Simon, Mohamed Ibrahim, Ruchira Chatterjee, Margaret D Doyle, Mun Hon Cheah, Thomas Fransson, Petko Chernev, In-Sik Kim, Hiroki Makita, Medhanjali Dasgupta, Corey J Kaminsky, Miao Zhang, Julia Gätcke, Stephanie Haupt, Isabela I Nangca, Stephen M Keable, A Orkun Aydin, Kensure Tono, Shigeki Owada, Leland B Gee, Franklin D Fuller, Alexander Batyuk, Roberto Alonso Mori, James M Holton, Daniel W Paley, Nigel W Moriarty, Fikret Mamedov, Paul D Adams, Aaron S Brewster, Holger Dobbek, Nicholas K Sauter, Uwe Bergmann, Athina Zouni, Johannes Messinger, Jan F Kern, Junko Yano, Vittal K Yachandra
Structural evidence for intermediates during O 2 formation in photosystem II. Nature 617 (7961) (2023)
Asmit Bhowmick, Rana Hussein, Isabel Bogacz, Philipp S Simon, Mohamed Ibrahim, Ruchira Chatterjee, Margaret D Doyle, Mun Hon Cheah, Thomas Fransson, Petko Chernev, In-Sik Kim, Hiroki Makita, Medhanjali Dasgupta, Corey J Kaminsky, Miao Zhang, Julia Gätcke, Stephanie Haupt, Isabela I Nangca, Stephen M Keable, A Orkun Aydin, Kensure Tono, Shigeki Owada, Leland B Gee, Franklin D Fuller, Alexander Batyuk, Roberto Alonso Mori, James M Holton, Daniel W Paley, Nigel W Moriarty, Fikret Mamedov, Paul D Adams, Aaron S Brewster, Holger Dobbek, Nicholas K Sauter, Uwe Bergmann, Athina Zouni, Johannes Messinger, Jan F Kern, Junko Yano, Vittal K Yachandra
Structural evidence for intermediates during O 2 formation in photosystem II. Nature 617 (7961) (2023)
Galen J Correy, Daniel W Kneller, Gwyndalyn Phillips, Swati Pant, Silvia Russi, Aina E Cohen, George Meigs, James M Holton, Stefan Gahbauer, Michael C Thompson, Alan Ashworth, Leighton Coates, Andrey Y Kovalevsky, Flora Meilleur, Brian K Shoichet
The mechanisms of catalysis and ligand binding for the SARS-CoV-2 NSP3 macrodomain from neutron and x-ray diffraction at room temperature. Science advances 8 (21) (2022)
Mohamed Ibrahim, Nigel W Moriarty, Jan F Kern, James M Holton, Aaron S Brewster, Asmit Bhowmick, Uwe Bergmann, Athina Zouni, Johannes Messinger, Vittal K Yachandra, Junko Yano, Holger Dobbek, Nicholas K Sauter, Paul D Adams
Reply to Wang et al.: Clear evidence of binding of Ox to the oxygen-evolving complex of photosystem II is best observed in the omit map. Proceedings of the National Academy of Sciences of the United States of America 118 (24) (2021)
Marion Schuller, Galen J Correy, Stefan Gahbauer, Daren Fearon, Taiasean Wu, Roberto Efraín Díaz, Iris D Young, Luan Carvalho Martins, Dominique H Smith, Ursula Schulze-Gahmen, Tristan W Owens, Ishan Deshpande, Gregory E Merz, Aye C Thwin, Justin T Biel, Jessica K Peters, Michelle Moritz, Nadia Herrera, Huong T Kratochvil, null null, Anthony Aimon, James M Bennett, José Brandão-Neto, Aina E Cohen, Alexandre Dias, Alice Douangamath, Louise Dunnett, Oleg Fedorov, Matteo P Ferla, Martin R Fuchs, Tyler J Gorrie-Stone, James M Holton, Michael G Johnson, Tobias Krojer, George Meigs, Ailsa J Powell, Johannes Gregor Matthias Rack, Victor L Rangel, Silvia Russi, Rachael E Skyner, Clyde A Smith, Alexei S Soares, Jennifer L Wierman, Kang Zhu, Peter O'Brien, Natalia Jura, Alan Ashworth, John J Irwin, Michael C Thompson, Jason E Gestwicki, Frank von Delft, Brian K Shoichet, Brian K Shoichet, Ivan Ahel
Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking. Science advances 7 (16) (2021)
Rana Hussein, Mohamed Ibrahim, Asmit Bhowmick, Philipp S Simon, Ruchira Chatterjee, Louise Lassalle, Margaret Doyle, Isabel Bogacz, In-Sik Kim, Mun Hon Cheah, Sheraz Gul, Casper de Lichtenberg, Petko Chernev, Cindy C Pham, Iris D Young, Sergio Carbajo, Franklin D Fuller, Roberto Alonso Mori, Alex Batyuk, Kyle D Sutherlin, Aaron S Brewster, Robert Bolotovsky, Derek Mendez, James M Holton, Nigel W Moriarty, Paul D Adams, Uwe Bergmann, Nicholas K Sauter, Holger Dobbek, Johannes Messinger, Athina Zouni, Jan F Kern, Vittal K Yachandra, Junko Yano
Structural dynamics in the water and proton channels of photosystem II during the S2 to S3 transition. Nature communications 12 (1) (2021)
Mohamed Ibrahim, Thomas Fransson, Ruchira Chatterjee, Mun Hon Cheah, Rana Hussein, Louise Lassalle, Kyle D Sutherlin, Iris D Young, Franklin D Fuller, Sheraz Gul, In-Sik Kim, Philipp S Simon, Casper de Lichtenberg, Petko Chernev, Isabel Bogacz, Cindy C Pham, Allen M Orville, Nicholas Saichek, Trent Northen, Alexander Batyuk, Sergio Carbajo, Roberto Alonso-Mori, Kensuke Tono, Shigeki Owada, Asmit Bhowmick, Robert Bolotovsky, Derek Mendez, Nigel W Moriarty, James M Holton, Holger Dobbek, Aaron S Brewster, Paul D Adams, Nicholas K Sauter, Uwe Bergmann, Athina Zouni, Johannes Messinger, Jan F Kern, Vittal K Yachandra, Junko Yano
Untangling the sequence of events during the S2 → S3 transition in photosystem II and implications for the water oxidation mechanism. Proceedings of the National Academy of Sciences of the United States of America 117 (23) (2020)
Eugenio De La Mora, Nicolas Coquelle, Charles S Bury, Martin Rosenthal, James M Holton, Ian Carmichael, Elspeth F Garman, Manfred Burghammer, Jacques-Philippe Colletier, Martin Weik
Radiation damage and dose limits in serial synchrotron crystallography at cryo- and room temperatures. Proceedings of the National Academy of Sciences of the United States of America 117 (8) (2020)