Jeffery M Trent (Jeffrey Trent, Jeffrey M Trent)

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 26

Top Topics

Circulating Tumor

Metastatic Renal Cell Carcinoma

Chronic Myeloid Leukemia

Top Venues

Science translational medicine

Nature communications

Cancer research

This page only lists publications with an associated author ORCID identifier.

Publications

Hedyeh Ebrahimi, Nazli Dizman, Luis Meza, Jasnoor Malhotra, Xiaochen Li, Tanya Barauskas Dorff, Paul Frankel, Marian Llamas-Quitiquit, Joann Hsu, Zeynep B Zengin, Marice Alcantara, Daniela V Castro, Benjamin Mercier, Neal Chawla, Alex Chehrazi-Raffle, Regina Barragan-Carrillo, Salvador Jaime-Casas, Ameish Govindarajan, John Gillece, Jeffery M Trent, Peter P Lee, Thomas P Parks, Motomichi Takahashi, Atsushi Hayashi, Marcin Kortylewski, J Gregory Caporaso, Keehoon Lee, Abhishek Tripathi, Sumanta Kumar Pal
Cabozantinib and nivolumab with or without live bacterial supplementation in metastatic renal cell carcinoma: a randomized phase 1 trial. Nature medicine (2024)
David E Frankhouser, Russell C Rockne, Lisa Uechi, Dandan Zhao, Sergio Branciamore, Denis O'Meally, Jihyun Irizarry, Lucy Y Ghoda, Haris Ali, Jeffery M Trent, Stephen J Forman, Yu-Hsuan Fu, Ya-Huei Kuo, Bin Amber Zhang, Guido Marcucci
State-transition modeling of blood transcriptome predicts disease evolution and treatment response in chronic myeloid leukemia. Leukemia 38 (4) (2024)
David E Frankhouser, Russell C Rockne, Lisa Uechi, Dandan Zhao, Sergio Branciamore, Denis O'Meally, Jihyun Irizarry, Lucy Y Ghoda, Haris Ali, Jeffery M Trent, Stephen J Forman, Yu-Hsuan Fu, Ya-Huei Kuo, Bin Amber Zhang, Guido Marcucci
State-transition modeling of blood transcriptome predicts disease evolution and treatment response in chronic myeloid leukemia. Leukemia 38 (4) (2024)
David E Frankhouser, Russell C Rockne, Lisa Uechi, Dandan Zhao, Sergio Branciamore, Denis O'Meally, Jihyun Irizarry, Lucy Y Ghoda, Haris Ali, Jeffery M Trent, Stephen J Forman, Yu-Hsuan Fu, Ya-Huei Kuo, Bin Amber Zhang, Guido Marcucci
State-transition modeling of blood transcriptome predicts disease evolution and treatment response in chronic myeloid leukemia. Leukemia (2024)
David E Frankhouser, Russell C Rockne, Lisa Uechi, Dandan Zhao, Sergio Branciamore, Denis O'Meally, Jihyun Irizarry, Lucy Y Ghoda, Haris Ali, Jeffery M Trent, Stephen J Forman, Yu-Hsuan Fu, Ya-Huei Kuo, Bin Amber Zhang, Guido Marcucci
State-transition modeling of blood transcriptome predicts disease evolution and treatment response in chronic myeloid leukemia. Leukemia (2024)
David E Frankhouser, Russell C Rockne, Lisa Uechi, Dandan Zhao, Sergio Branciamore, Denis O'Meally, Jihyun Irizarry, Lucy Y Ghoda, Haris Ali, Jeffery M Trent, Stephen J Forman, Yu-Hsuan Fu, Ya-Huei Kuo, Bin Amber Zhang, Guido Marcucci
State-transition modeling of blood transcriptome predicts disease evolution and treatment response in chronic myeloid leukemia. Leukemia 38 (4) (2024)
David E Frankhouser, Russell C Rockne, Lisa Uechi, Dandan Zhao, Sergio Branciamore, Denis O'Meally, Jihyun Irizarry, Lucy Y Ghoda, Haris Ali, Jeffery M Trent, Stephen J Forman, Yu-Hsuan Fu, Ya-Huei Kuo, Bin Amber Zhang, Guido Marcucci
State-transition modeling of blood transcriptome predicts disease evolution and treatment response in chronic myeloid leukemia. Leukemia 38 (4) (2024)
David E Frankhouser, Russell C Rockne, Lisa Uechi, Dandan Zhao, Sergio Branciamore, Denis O'Meally, Jihyun Irizarry, Lucy Y Ghoda, Haris Ali, Jeffery M Trent, Stephen J Forman, Yu-Hsuan Fu, Ya-Huei Kuo, Bin Amber Zhang, Guido Marcucci
State-transition modeling of blood transcriptome predicts disease evolution and treatment response in chronic myeloid leukemia. Leukemia (2024)
Xianbing Zhu, Zheng Fu, Shary Y Chen, Dionzie Ong, Giulio Aceto, Rebecca Ho, Jutta Steinberger, Anie Monast, Virginie Pilon, Eunice Li, Monica Ta, Kyle Ching, Bianca N Adams, Gian Luca Negri, Luc Choiniere, Lili Fu, Kitty Pavlakis, Patrick Pirrotte, Daina Z Avizonis, Jeffery M Trent, Bernard E Weissman, Ramon I Klein Geltink, Gregg B Morin, Morag Park, David G Huntsman, William D Foulkes, Yemin Wang, Sidong Huang
Alanine supplementation exploits glutamine dependency induced by SMARCA4/2-loss. Nature communications 14 (1) (2023)
Xianbing Zhu, Zheng Fu, Shary Y Chen, Dionzie Ong, Giulio Aceto, Rebecca Ho, Jutta Steinberger, Anie Monast, Virginie Pilon, Eunice Li, Monica Ta, Kyle Ching, Bianca N Adams, Gian Luca Negri, Luc Choiniere, Lili Fu, Kitty Pavlakis, Patrick Pirrotte, Daina Z Avizonis, Jeffery M Trent, Bernard E Weissman, Ramon I Klein Geltink, Gregg B Morin, Morag Park, David G Huntsman, William D Foulkes, Yemin Wang, Sidong Huang
Alanine supplementation exploits glutamine dependency induced by SMARCA4/2-loss. Nature communications 14 (1) (2023)
Karan K Budhraja, Bradon R McDonald, Michelle D Stephens, Tania Contente-Cuomo, Havell Markus, Maria Farooq, Patricia F Favaro, Sydney Connor, Sara A Byron, Jan B Egan, Brenda J Ernst, Timothy K McDaniel, Aleksandar Sekulic, Nhan L Tran, Michael D Prados, Mitesh J Borad, Michael E Berens, Barbara A Pockaj, Patricia M LoRusso, Alan H Bryce, Jeffery M Trent, Muhammed Murtaza
Genome-wide analysis of aberrant position and sequence of plasma DNA fragment ends in patients with cancer. Science translational medicine 15 (678) (2023)
Anne L R Schuster, Norah L Crossnohere, Melinda Bachini, Charles L Wiggins, John D Carpten, Elizabeth B Claus, Debbie L Bennett, Li Ding, Bettina F Drake, Ryan C Fields, Katherine A Janeway, Bethany M Kwan, Heinz-Josef Lenz, Qin Ma, Shiraz I Mishra, Electra D Paskett, Timothy R Rebbeck, Charité N Ricker, Mariana C Stern, Andrew L Sussman, Jessica C Tiner, Jeffery M Trent, Roel G W Verhaak, Nikhil Wagle, Cheryl L Willman, John F P Bridges
Priorities to promote participant engagement in the Participant Engagement and Cancer Genome Sequencing (PE-CGS) Network. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology (2023)
Anne L R Schuster, Norah L Crossnohere, Melinda Bachini, Charles L Wiggins, John D Carpten, Elizabeth B Claus, Debbie L Bennett, Li Ding, Bettina F Drake, Ryan C Fields, Katherine A Janeway, Bethany M Kwan, Heinz-Josef Lenz, Qin Ma, Shiraz I Mishra, Electra D Paskett, Timothy R Rebbeck, Charité N Ricker, Mariana C Stern, Andrew L Sussman, Jessica C Tiner, Jeffery M Trent, Roel G W Verhaak, Nikhil Wagle, Cheryl L Willman, John F P Bridges
Priorities to promote participant engagement in the Participant Engagement and Cancer Genome Sequencing (PE-CGS) Network. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology (2023)
Karan K Budhraja, Bradon R McDonald, Michelle D Stephens, Tania Contente-Cuomo, Havell Markus, Maria Farooq, Patricia F Favaro, Sydney Connor, Sara A Byron, Jan B Egan, Brenda J Ernst, Timothy K McDaniel, Aleksandar Sekulic, Nhan L Tran, Michael D Prados, Mitesh J Borad, Michael E Berens, Barbara A Pockaj, Patricia M LoRusso, Alan H Bryce, Jeffery M Trent, Muhammed Murtaza
Genome-wide analysis of aberrant position and sequence of plasma DNA fragment ends in patients with cancer. Science translational medicine 15 (678) (2023)
Karan K Budhraja, Bradon R McDonald, Michelle D Stephens, Tania Contente-Cuomo, Havell Markus, Maria Farooq, Patricia F Favaro, Sydney Connor, Sara A Byron, Jan B Egan, Brenda J Ernst, Timothy K McDaniel, Aleksandar Sekulic, Nhan L Tran, Michael D Prados, Mitesh J Borad, Michael E Berens, Barbara A Pockaj, Patricia M LoRusso, Alan H Bryce, Jeffery M Trent, Muhammed Murtaza
Genome-wide analysis of aberrant position and sequence of plasma DNA fragment ends in patients with cancer. Science translational medicine 15 (678) (2023)
David E Frankhouser, Russell C Rockne, Lisa Uechi, Dandan Zhao, Sergio Branciamore, Denis O'Meally, Jihyun Izarriy, Lucy Y Ghoda, Haris Ali, Jeffery M Trent, Stephen Forman, Yu-Hsuan Fu, Ya-Huei Kuo, Bin Zhang, Guido Marcucci
State-transition Modeling of Blood Transcriptome Predicts Disease Evolution and Treatment Response in Chronic Myeloid Leukemia (CML). bioRxiv : the preprint server for biology (2023)
Cheryl A London, Heather L Gardner, Shaying Zhao, Deborah W Knapp, Sagar M Utturkar, Dawn L Duval, Melissa R Chambers, Elaine A Ostrander, Jeffery M Trent, Gina R Kuffel
Leading the pack: Best practices in comparative canine cancer genomics to inform human oncology. Veterinary and comparative oncology (2023)
Xianbing Zhu, Zheng Fu, Shary Y Chen, Dionzie Ong, Giulio Aceto, Rebecca Ho, Jutta Steinberger, Anie Monast, Virginie Pilon, Eunice Li, Monica Ta, Kyle Ching, Bianca N Adams, Gian Luca Negri, Luc Choiniere, Lili Fu, Kitty Pavlakis, Patrick Pirrotte, Daina Z Avizonis, Jeffery M Trent, Bernard E Weissman, Ramon I Klein Geltink, Gregg B Morin, Morag Park, David G Huntsman, William D Foulkes, Yemin Wang, Sidong Huang
Alanine supplementation exploits glutamine dependency induced by SMARCA4/2-loss. Nature communications 14 (1) (2023)
Karan K Budhraja, Bradon R McDonald, Michelle D Stephens, Tania Contente-Cuomo, Havell Markus, Maria Farooq, Patricia F Favaro, Sydney Connor, Sara A Byron, Jan B Egan, Brenda J Ernst, Timothy K McDaniel, Aleksandar Sekulic, Nhan L Tran, Michael D Prados, Mitesh J Borad, Michael E Berens, Barbara A Pockaj, Patricia M LoRusso, Alan H Bryce, Jeffery M Trent, Muhammed Murtaza
Genome-wide analysis of aberrant position and sequence of plasma DNA fragment ends in patients with cancer. Science translational medicine 15 (678) (2023)
Alexander Chehrazi-Raffle, Ramya Muddasani, Nazli Dizman, JoAnn Hsu, Luis Meza, Zeynep B Zengin, Jasnoor Malhotra, Neal Chawla, Tanya Dorff, Tania Contente-Cuomo, Devin Dinwiddie, Bradon R McDonald, Timothy McDaniel, Jeffery M Trent, Frederick L Baehner, Muhammed Murtaza, Sumanta Kumar Pal
Ultrasensitive Circulating Tumor DNA Pilot Study Distinguishes Complete Response and Partial Response With Immunotherapy in Patients With Metastatic Renal Cell Carcinoma. JCO precision oncology 7 (2023)
Patricia M LoRusso, Aleksandar Sekulic, Jeffrey A Sosman, Winnie S Liang, John Carpten, David W Craig, David B Solit, Alan H Bryce, Jeffrey A Kiefer, Jessica Aldrich, Sara Nasser, Rebecca Halperin, Sara A Byron, Mary Jo Pilat, Scott A Boerner, Diane Durecki, William P D Hendricks, Daniel Enriquez, Tyler Izatt, Jonathan Keats, Christophe Legendre, Svetomir N Markovic, Amy Weise, Fatima Naveed, Jessica Schmidt, Gargi D Basu, Shobana Sekar, Jonathan Adkins, Erica Tassone, Karthigayini Sivaprakasam, Victoria Zismann, Valerie S Calvert, Emanuel F Petricoin, Leslie Anne Fecher, Christopher Lao, J Paul Eder, Nicholas J Vogelzang, Jane Perlmutter, Mark Gorman, Barbara Manica, Lisa Fox, Nicholas Schork, Daniel Zelterman, Michelle DeVeaux, Richard W Joseph, C Lance Cowey, Jeffery M Trent
Identifying treatment options for BRAFV600 wild-type metastatic melanoma: A SU2C/MRA genomics-enabled clinical trial. PloS one 16 (4) (2021)
Li Tai Fang, Bin Zhu, Yongmei Zhao, Wanqiu Chen, Zhao-Wei Yang, Liz Kerrigan, Kurt Langenbach, Maryellen de Mars, Charles Lu, Kenneth Idler, Howard Jacob, Yuanting Zheng, Luyao Ren, Ying Yu, Erich Jaeger, Gary P Schroth, Ogan D Abaan, Keyur Talsania, Justin Lack, Tsai-Wei Shen, Zhong Chen, Seta Stanbouly, Bao Tran, Jyoti Shetty, Yuliya Kriga, Daoud Meerzaman, Cu Nguyen, Virginie Petitjean, Marc Sultan, Margaret Cam, Monika Mehta, Tiffany Hung, Eric Peters, Rasika Kalamegham, Sayed Mohammad Ebrahim Sahraeian, Marghoob Mohiyuddin, Yunfei Guo, Lijing Yao, Lei Song, Hugo Y K Lam, Jiri Drabek, Petr Vojta, Roberta Maestro, Daniela Gasparotto, Sulev Kõks, Ene Reimann, Andreas Scherer, Jessica Nordlund, Ulrika Liljedahl, Roderick V Jensen, Mehdi Pirooznia, Zhipan Li, Chunlin Xiao, Stephen T Sherry, Rebecca Kusko, Malcolm Moos, Eric Donaldson, Zivana Tezak, Baitang Ning, Weida Tong, Jing Li, Penelope Duerken-Hughes, Claudia Catalanotti, Shamoni Maheshwari, Joe Shuga, Winnie S Liang, Jonathan J Keats, Jonathan Adkins, Erica Tassone, Victoria Zismann, Timothy McDaniel, Jeffery M Trent, Jonathan Foox, Daniel Butler, Christopher E Mason, Huixiao Hong, Le-Ming Shi, Charles Wang, Wenming Xiao, null null
Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing. Nature biotechnology 39 (9) (2021)
Sara A Byron, William P D Hendricks, Abhinav B Nagulapally, Jacqueline M Kraveka, William S Ferguson, Valerie I Brown, Don E Eslin, Deanna Mitchell, Albert Cornelius, William Roberts, Michael S Isakoff, Javier E Oesterheld, Randal K Wada, Jawhar Rawwas, Kathleen Neville, Peter E Zage, Virginia L Harrod, Genevieve Bergendahl, Elizabeth VanSickle, Karl Dykema, Jeffrey Bond, Hsien-Chao Chou, Jun S Wei, Xinyu Wen, Hue V Reardon, Alison Roos, Sara Nasser, Tyler Izatt, Daniel Enriquez, Apurva M Hegde, Faith Cisneros, Austin Christofferson, Bryce Turner, Szabolcs Szelinger, Jonathan J Keats, Rebecca F Halperin, Javed Khan, Giselle L Saulnier Sholler, Jeffery M Trent
Genomic and Transcriptomic Analysis of Relapsed and Refractory Childhood Solid Tumors Reveals a Diverse Molecular Landscape and Mechanisms of Immune Evasion. Cancer research 81 (23) (2021)
Jennifer X Ji, Dawn R Cochrane, Basile Tessier-Cloutier, Shary Yutin Chen, Germain Ho, Khyatiben V Pathak, Isabel N Alcazar, David A Farnell, Samuel Leung, Angela Cheng, Christine Chow, Shane Colborne, Gian Luca Negri, Friedrich Kommoss, Anthony Karnezis, Gregg B Morin, Jessica Nell McAlpine, C Blake Gilks, Bernard E Weissman, Jeffery M Trent, Lynn Hoang, Patrick Pirrotte, Yemin Wang, David G Huntsman
Arginine Depletion Therapy with ADI-PEG20 Limits Tumor Growth in Argininosuccinate Synthase-Deficient Ovarian Cancer, Including Small-Cell Carcinoma of the Ovary, Hypercalcemic Type. Clinical cancer research : an official journal of the American Association for Cancer Research 26 (16) (2020)
Melanie Kogler, Luigi Tortola, Gian Luca Negri, Alexandra Leopoldi, Amal M El-Naggar, Stefan Mereiter, Carlos Gomez-Diaz, Roberto Nitsch, Davide Tortora, Anoop M Kavirayani, Bianca V Gapp, Shuan Rao, Iris Uribesalgo, David Hoffmann, Domagoj Cikes, Maria Novatchkova, David A Williams, Jeffery M Trent, Fumiyo Ikeda, Mads Daugaard, Astrid Hagelkruys, Poul H Sorensen, Josef M Penninger
HACE1 Prevents Lung Carcinogenesis via Inhibition of RAC-Family GTPases. Cancer research 80 (14) (2020)
William P D Hendricks, Victoria Zismann, Karthigayini Sivaprakasam, Christophe Legendre, Kelsey Poorman, Waibhav Tembe, Nieves Perdigones, Jeffrey Kiefer, Winnie Liang, Valerie DeLuca, Mitchell Stark, Alison Ruhe, Roe Froman, Nicholas S Duesbery, Megan Washington, Jessica Aldrich, Mark W Neff, Matthew J Huentelman, Nicholas K Hayward, Kevin Brown, Douglas H Thamm, Gerald Post, Chand Khanna, Barbara Davis, Matthew Breen, Alexander Sekulic, Jeffery M Trent
Somatic inactivating PTPRJ mutations and dysregulated pathways identified in canine malignant melanoma by integrated comparative genomic analysis. PLoS genetics 14 (9) (2018)